Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F28 I1 R1 120 97.0 3206026 99.3% 3183583 140.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,028,007 C→T A21V (GCA→GTA)  yccU → putative CoA‑binding protein with NAD(P)‑binding Rossmann‑fold domain

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,028,0070CT100.0% 224.8 / NA 69A21V (GCA→GTA) yccUputative CoA‑binding protein with NAD(P)‑binding Rossmann‑fold domain
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (39/30);  total (39/30)

TCATTCATTCGTATTAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGCAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCACGCTGGCAGA  >  NC_000913/1027871‑1028142
                                                                                                                                        |                                                                                                                                       
tcattcatTCGTATTAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAg                                                                                                                                      <  1:296678/140‑1 (MQ=255)
  attcattcGTATTAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCg                                                                                                                                    >  2:178719/1‑140 (MQ=255)
  attcattcGTATTAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCg                                                                                                                                    <  2:592302/140‑1 (MQ=255)
   ttcattcGTATTAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGa                                                                                                                                   <  1:167482/140‑1 (MQ=255)
            aTTAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGa                                                                                                                          >  2:236727/1‑140 (MQ=255)
            aTTAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGa                                                                                                                          >  1:1052948/1‑140 (MQ=255)
              tAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATc                                                                                                                        <  2:1520593/140‑1 (MQ=255)
              tAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATc                                                                                                                        <  1:214992/140‑1 (MQ=255)
              tAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATc                                                                                                                        >  2:1249611/1‑140 (MQ=255)
                  tGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTcc                                                                                                                    >  1:590512/1‑140 (MQ=255)
                  tGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTcc                                                                                                                    >  2:813759/1‑140 (MQ=255)
                  tGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTcc                                                                                                                    >  2:1300200/1‑140 (MQ=255)
                    cATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCa                                                                                                                  >  2:148416/1‑140 (MQ=255)
                              aTGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGt                                                                                                        >  1:1560363/1‑140 (MQ=255)
                              aTGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGt                                                                                                        >  2:363131/1‑140 (MQ=255)
                                            gTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTAc                                                                                          <  1:1293271/140‑1 (MQ=255)
                                            gTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTAc                                                                                          <  2:1494532/140‑1 (MQ=255)
                                            gTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTAc                                                                                          <  1:382336/140‑1 (MQ=255)
                                             tACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACt                                                                                         <  1:877476/140‑1 (MQ=255)
                                             tACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACt                                                                                         <  2:1283145/140‑1 (MQ=255)
                                             tACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACt                                                                                         <  2:347715/140‑1 (MQ=255)
                                             tACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACt                                                                                         <  1:236727/140‑1 (MQ=255)
                                                acTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGa                                                                                      <  2:462531/140‑1 (MQ=255)
                                                  tttGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGAcc                                                                                    <  2:735566/140‑1 (MQ=255)
                                                    tGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAg                                                                                  >  2:1414823/1‑140 (MQ=255)
                                                    tGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAg                                                                                  >  2:150550/1‑140 (MQ=255)
                                                    tGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGGGGGGGTAAGCGACAAACCCGACCGTCCCAGCTATCGCGCGATGAAATATCTACTCGACCAg                                                                                  >  2:1370827/1‑140 (MQ=255)
                                                              tCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACg                                                                        >  2:158432/1‑140 (MQ=255)
                                                              tCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACg                                                                        >  2:1468724/1‑140 (MQ=255)
                                                              tCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACg                                                                        >  2:980874/1‑140 (MQ=255)
                                                              tCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACg                                                                        >  1:694100/1‑140 (MQ=255)
                                                              tCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACg                                                                        >  1:499671/1‑140 (MQ=255)
                                                              tCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACg                                                                        >  2:633622/1‑140 (MQ=255)
                                                              tCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACg                                                                        >  2:905712/1‑140 (MQ=255)
                                                               cTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGt                                                                       <  1:528438/140‑1 (MQ=255)
                                                                        ataatGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGt                                                              >  1:113825/1‑140 (MQ=255)
                                                                        ataatGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGt                                                              >  1:706129/1‑140 (MQ=255)
                                                                        ataatGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGt                                                              >  2:1448567/1‑140 (MQ=255)
                                                                        ataatGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGAATCAAGTCATTCCGGt                                                              >  1:511112/1‑140 (MQ=255)
                                                                            tGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCg                                                          >  1:591566/1‑140 (MQ=255)
                                                                             gaaagaaaCCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGc                                                         >  2:126567/1‑140 (MQ=255)
                                                                                        atatTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGcc                                              >  1:534340/1‑140 (MQ=255)
                                                                                            tGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTGATTCCGGTTTCGCCAAAAGTTGCCGGCa                                          >  2:976703/1‑140 (MQ=255)
                                                                                               aGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCaaaa                                       <  1:1438230/140‑1 (MQ=255)
                                                                                                   aTTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACgct                                   >  2:406910/1‑140 (MQ=255)
                                                                                                   aTTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACgct                                   >  2:920099/1‑140 (MQ=255)
                                                                                                   aTTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACgct                                   >  1:45712/1‑140 (MQ=255)
                                                                                                    ttttAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACgctg                                  <  2:1078747/140‑1 (MQ=255)
                                                                                                     tttAACGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACgctgc                                 <  1:993333/140‑1 (MQ=255)
                                                                                                          cGTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGc                            <  1:1316579/140‑1 (MQ=255)
                                                                                                           gTCCACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGcc                           >  1:116018/1‑140 (MQ=255)
                                                                                                             ccACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCTCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAg                         <  1:178719/140‑1 (MQ=255)
                                                                                                              cACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGa                        <  1:980874/140‑1 (MQ=255)
                                                                                                              cACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGa                        <  1:1300200/140‑1 (MQ=255)
                                                                                                              cACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGa                        <  1:430641/140‑1 (MQ=255)
                                                                                                              cACTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGa                        <  1:270934/140‑1 (MQ=255)
                                                                                                                cTCACACCATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGACATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAg                      <  1:1468724/140‑1 (MQ=255)
                                                                                                                       cATTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATg               >  1:996940/1‑140 (MQ=255)
                                                                                                                        aTTGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATgg              >  2:492012/1‑140 (MQ=255)
                                                                                                                          tGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCa            <  2:707220/140‑1 (MQ=255)
                                                                                                                          tGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCa            <  1:363131/140‑1 (MQ=255)
                                                                                                                          tGCGCTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCa            >  2:13001/1‑140 (MQ=255)
                                                                                                                           gcgcTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCAc           >  2:7644/1‑140 (MQ=255)
                                                                                                                           gcgcTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCAc           >  1:378595/1‑140 (MQ=255)
                                                                                                                           gcgcTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCAc           <  1:92598/140‑1 (MQ=255)
                                                                                                                           gcgcTGGCGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCAc           >  1:1409130/1‑140 (MQ=255)
                                                                                                                            cgcTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCACg          <  2:499671/140‑1 (MQ=255)
                                                                                                                             gcTGGTGGGGGTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCACGc         >  1:1118245/1‑140 (MQ=255)
                                                                                                                                 gtggGGGTAAGCGACAAACCCGATAGTCCCAGCTATCGCGTGATGAAATATCTTCTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGCAGGGGCATGGCACGCTGGc     >  2:907935/1‑140 (MQ=255)
                                                                                                                                    ggggTAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCACGCTGGCAGa  <  2:590512/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                       
TCATTCATTCGTATTAGCTGCATGGTTGGCATGTCGGCTTTGTCGTACACTTTGTTAAACAGTCTGGAGGAAATAATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGCAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCACGCTGGCAGA  >  NC_000913/1027871‑1028142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A