Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
134 |
60.5 |
2175152 |
94.0% |
2044642 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
1,297,367 |
(ACA)4→3 |
coding (753‑755/2676 nt) |
adhE ← |
aldehyde‑alcohol dehydrogenase |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
1297356 |
1297358 |
3 |
75 [0] |
[0] 75 |
adhE |
aldehyde‑alcohol dehydrogenase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
1297359 = | 0 (0.000) | 66 (1.190) |
46/252 |
0.1 |
100% |
coding (763/2676 nt) |
adhE |
aldehyde‑alcohol dehydrogenase |
| ? | NC_000913 |
= 1297355 |
0 (0.000) | coding (767/2676 nt) |
adhE |
aldehyde‑alcohol dehydrogenase |
GATK/CNVnator alignment
N/A
