Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F28 I1 R1
|
108 |
95.2 |
3177646 |
99.2% |
3152224 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,298,954 |
T→C |
G119G (GGT→GGC) |
ychE → |
putative inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,298,954 | 0 | T | C | 99.1%
| 392.6
/ ‑5.1
| 105 | G119G (GGT→GGC) | ychE | putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (51/53); total (51/54) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 109 total aligned reads displayed.
TCAATTGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGTGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTATGTTGTT > NC_000913/1298820‑1299090
|
tCAATTGATTCGTTCCGTACCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATtggcgtggt < 2:1357827/140‑1 (MQ=255)
ttGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGAATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCa < 1:4906/140‑1 (MQ=255)
tGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATAATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCAc > 2:1160926/1‑140 (MQ=255)
gATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACt > 1:1557498/1‑140 (MQ=255)
gATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACt < 1:113749/140‑1 (MQ=255)
gATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACt > 1:1275057/1‑140 (MQ=255)
ttCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTgg < 2:260257/140‑1 (MQ=255)
tCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGc > 1:896662/1‑140 (MQ=255)
tCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGc > 2:364437/1‑140 (MQ=255)
cGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCg < 2:630903/140‑1 (MQ=255)
cGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCg < 1:1415904/140‑1 (MQ=255)
ttCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGtt > 2:356923/1‑140 (MQ=255)
ttCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGtt > 1:926779/1‑140 (MQ=255)
ccGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGc > 2:1296139/1‑140 (MQ=255)
tCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTg < 2:1287927/140‑1 (MQ=255)
ccGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATg > 1:823942/1‑140 (MQ=255)
gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 1:683743/140‑1 (MQ=255)
gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 2:503824/140‑1 (MQ=255)
gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 1:1569149/140‑1 (MQ=255)
gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 2:492524/140‑1 (MQ=255)
gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 1:530909/140‑1 (MQ=255)
gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 2:332757/140‑1 (MQ=255)
gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGACAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 1:1251621/140‑1 (MQ=255)
ggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCg > 2:97221/1‑140 (MQ=255)
tATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGTGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGc < 1:1374058/140‑1 (MQ=255)
tATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGc < 1:644042/140‑1 (MQ=255)
aTCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGcc > 2:407065/1‑140 (MQ=255)
aTCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGcc > 2:315319/1‑140 (MQ=255)
cTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAgg < 1:1298962/140‑1 (MQ=255)
ggtggtGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAgggg > 1:1528824/1‑140 (MQ=255)
gtggtgACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGc > 2:78796/1‑140 (MQ=255)
tggtgACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCg < 1:189473/140‑1 (MQ=255)
ggtgACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGa < 2:823942/140‑1 (MQ=255)
ggtgACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGa < 1:393959/140‑1 (MQ=255)
gACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc > 2:1534061/1‑123 (MQ=255)
aCAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAg > 2:67821/1‑140 (MQ=255)
aaTAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGtt > 2:511919/1‑140 (MQ=255)
aaTAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGCGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGtt > 1:1519855/1‑140 (MQ=255)
tAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCt > 1:1463703/1‑140 (MQ=255)
cGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGGCAGGGGCGGTCAGCTCTAcc > 2:1058794/1‑140 (MQ=255)
cGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTAcc < 1:356923/140‑1 (MQ=255)
cGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTAcc < 1:993735/140‑1 (MQ=255)
cGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGGTCTAcc > 2:231242/1‑140 (MQ=255)
aTGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCAt > 1:464196/1‑140 (MQ=255)
tGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCACGGGCGATATGTTCCACCCTc > 1:1245757/1‑140 (MQ=255)
tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGGTCAGTTCTACCAACgc > 2:933239/1‑139 (MQ=255)
tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGt > 1:1550594/1‑140 (MQ=255)
tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGt > 1:742961/1‑140 (MQ=255)
tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGt > 1:1252337/1‑140 (MQ=255)
tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGt > 1:393993/1‑140 (MQ=255)
cGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTc < 2:1286912/140‑1 (MQ=255)
atgatCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTg > 2:217159/1‑140 (MQ=255)
atCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAATCCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTgggg < 1:984981/140‑1 (MQ=255)
atCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTgggg < 2:396465/140‑1 (MQ=255)
cAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTa < 1:724996/140‑1 (MQ=255)
cAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTa < 2:1463703/140‑1 (MQ=255)
gCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTAcg > 1:1476932/1‑140 (MQ=255)
cGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGGTCTACCATCGTCTGGGGGAcgc > 2:255680/1‑140 (MQ=255)
ggCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTAcgcg < 1:821350/140‑1 (MQ=255)
ggCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTAcgcg < 2:334436/140‑1 (MQ=255)
aGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTAt < 1:364437/140‑1 (MQ=255)
gCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATc < 1:407065/140‑1 (MQ=255)
gCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATc < 1:315319/140‑1 (MQ=255)
cTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGTGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATca < 2:1319771/140‑1 (MQ=255)
ggCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAg < 2:926779/140‑1 (MQ=255)
ggCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAg > 1:388750/1‑140 (MQ=255)
gCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGGTATCACAGc > 2:972883/1‑140 (MQ=255)
cGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCa < 2:9181/140‑1 (MQ=255)
cGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCa < 1:1212143/140‑1 (MQ=255)
cGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCa < 2:235281/140‑1 (MQ=255)
gATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAg > 2:1134812/1‑140 (MQ=255)
gATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAg > 1:1165235/1‑140 (MQ=255)
aaaCAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTa < 1:811072/140‑1 (MQ=255)
aaCAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTAt < 1:1160926/140‑1 (MQ=255)
aaCAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGtt > 2:448514/1‑140 (MQ=255)
aCAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGttt > 1:65257/1‑140 (MQ=255)
caagcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTg > 1:1345583/1‑140 (MQ=255)
caagcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTg > 2:1511939/1‑140 (MQ=255)
caagcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAGCTATCTGTTTg > 2:606325/1‑140 (MQ=255)
agcaagAAAAATCAGAATCCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGt < 1:933239/140‑1 (MQ=255)
gcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGtt > 1:298422/1‑140 (MQ=255)
gcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGGTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAGCTATCTGTTTGGtt > 1:676970/1‑140 (MQ=255)
aaaaaTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGTCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCttt < 2:1015949/140‑1 (MQ=255)
aaaaaTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCttt < 2:896662/140‑1 (MQ=255)
aaaaTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTtg < 2:464196/140‑1 (MQ=255)
aaaaTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTtg < 1:1587887/140‑1 (MQ=255)
aaaTCAGAAACCGCGGTACGTGAAAGCATTGACGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTtgt < 1:1357160/140‑1 (MQ=255)
aTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTgg < 1:1058794/140‑1 (MQ=255)
aGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTa < 2:1550594/140‑1 (MQ=255)
ccGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCa < 1:1134812/140‑1 (MQ=255)
cgGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTg < 1:1296139/140‑1 (MQ=255)
cgGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTg > 1:1040718/1‑140 (MQ=255)
ggTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGt < 2:1476932/140‑1 (MQ=255)
tACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTc < 1:217159/140‑1 (MQ=255)
aGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGCTCAGGTCTACCCTCGTCTGGGGGACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTTtg > 2:685013/1‑140 (MQ=255)
aGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTAtg < 2:1399422/140‑1 (MQ=255)
cATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTAtgtt > 1:1427742/1‑140 (MQ=255)
cATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTAtgtt > 2:489525/1‑140 (MQ=255)
ttGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTAtgttgt > 1:1027338/1‑140 (MQ=255)
tggcgtggtgCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTGCCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTATgttgtt < 2:1528824/140‑1 (MQ=255)
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TCAATTGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGTGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTATGTTGTT > NC_000913/1298820‑1299090
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
