Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A11 F28 I1 R1	134	60.5	2175152	94.0%	2044642	138.5

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,254,443	T→C	V42A (GTG→GCG)	yhaK →	bicupin‑related protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,254,443	0	T	C	100.0%	311.0 / NA	86	V42A (GTG→GCG)	yhaK	bicupin‑related protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (45/41); total (45/41)

AGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGTGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGCCAGCGC  >  NC_000913/3254307‑3254578

agGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCt                                                                                                                                      <  2:99129/140‑1 (MQ=255)

agGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCt                                                                                                                                      <  2:724689/140‑1 (MQ=255)

agGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCt                                                                                                                                      >  2:682979/1‑140 (MQ=255)

agGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCt                                                                                                                                      <  2:189094/140‑1 (MQ=255)

 ggTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCtt                                                                                                                                     >  1:225090/1‑140 (MQ=255)

  gTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTa                                                                                                                                    >  1:336098/1‑140 (MQ=255)

  gTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTa                                                                                                                                    >  2:480804/1‑140 (MQ=255)

   tCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTgcgc                                                                                                                                       >  1:141186/1‑136 (MQ=255)

   tCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTaa                                                                                                                                   >  1:680239/1‑140 (MQ=255)

     aaGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAAcc                                                                                                                                 >  1:679764/1‑140 (MQ=255)

        aaTTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAgg                                                                                                                              <  1:522608/140‑1 (MQ=255)

         aTTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCTGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGa                                                                                                                             <  2:830547/140‑1 (MQ=255)

          ttATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGaa                                                                                                                            >  1:1069051/1‑140 (MQ=255)

             tGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTg                                                                                                                         <  2:680239/140‑1 (MQ=255)

                           aCTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTgc                                                                                                           <  1:805942/140‑1 (MQ=255)

                           aCTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTgc                                                                                                           >  2:1081650/1‑140 (MQ=255)

                                  ggCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCttt                                                                                                    <  1:1081650/140‑1 (MQ=255)

                                   gCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTc                                                                                                   >  2:417707/1‑140 (MQ=255)

                                       tgtgGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGcc                                                                                               >  2:351185/1‑140 (MQ=255)

                                       tgtgGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGcc                                                                                               >  2:606745/1‑140 (MQ=255)

                                       tgtgGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGcc                                                                                               >  1:983187/1‑140 (MQ=255)

                                        gtgGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCcg                                                                                              <  1:317727/140‑1 (MQ=255)

                                         tgGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCcgc                                                                                             >  1:889224/1‑140 (MQ=255)

                                         tgGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCcgc                                                                                             <  1:682979/140‑1 (MQ=255)

                                         tgGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCcgc                                                                                             >  2:846974/1‑140 (MQ=255)

                                         tgGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCcgc                                                                                             >  1:88485/1‑140 (MQ=255)

                                                 cAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTAt                                                                                     >  2:843984/1‑140 (MQ=255)

                                                 cAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTAt                                                                                     >  1:465512/1‑140 (MQ=255)

                                                 cAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTAt                                                                                     >  2:527579/1‑140 (MQ=255)

                                                 cAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTAt                                                                                     >  2:824931/1‑140 (MQ=255)

                                                 cAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTAt                                                                                     >  1:765429/1‑140 (MQ=255)

                                                 cAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTAt                                                                                     >  1:885061/1‑140 (MQ=255)

                                                 cAGACTACGGATGGTTGCAGGCCCGGTATACTTTTCCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTAt                                                                                     >  1:54213/1‑140 (MQ=255)

                                                    aCTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATccc                                                                                  <  1:480804/140‑1 (MQ=255)

                                                        cGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAg                                                                              >  2:552490/1‑140 (MQ=255)

                                                          gATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTc                                                                            <  1:846974/140‑1 (MQ=255)

                                                            tGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGa                                                                          <  2:679764/140‑1 (MQ=255)

                                                              gTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGata                                                                        >  2:416194/1‑140 (MQ=255)

                                                              gTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGata                                                                        >  2:361186/1‑140 (MQ=255)

                                                                  cAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATAtttt                                                                    >  1:818705/1‑140 (MQ=255)

                                                                     gCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTaaa                                                                 >  1:174987/1‑140 (MQ=255)

                                                                       ccGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAAtg                                                               >  1:452912/1‑140 (MQ=255)

                                                                          gTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAAtgtg                                                             >  2:521645/1‑139 (MQ=255)

                                                                          gTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAAtgtg                                                             <  1:521645/139‑1 (MQ=255)

                                                                            ataCTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGAtt                                                          <  1:824931/140‑1 (MQ=255)

                                                                            ataCTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGAtt                                                          <  2:839403/140‑1 (MQ=255)

                                                                            ataCTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGAtt                                                          <  1:361186/140‑1 (MQ=255)

                                                                               cTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCtg                                                       <  2:983187/140‑1 (MQ=255)

                                                                                 ttttCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTTATTCtgga                                                     <  2:933934/140‑1 (MQ=255)

                                                                                 ttttCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCtgga                                                     <  2:452912/140‑1 (MQ=255)

                                                                                 ttttCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCtgga                                                     >  1:515782/1‑140 (MQ=255)

                                                                                   ttCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCtggatg                                                   <  2:818705/140‑1 (MQ=255)

                                                                                    tCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCtggatgg                                                  <  2:465512/140‑1 (MQ=255)

                                                                                      cTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGgag                                                <  1:843984/140‑1 (MQ=255)

                                                                                      cTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGgag                                                <  1:120725/140‑1 (MQ=255)

                                                                                      cTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGgag                                                <  2:889224/140‑1 (MQ=255)

                                                                                      cTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGgag                                                <  1:606745/140‑1 (MQ=255)

                                                                                         tGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAg                                             <  2:632427/140‑1 (MQ=255)

                                                                                           gACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCa                                           <  2:246141/140‑1 (MQ=255)

                                                                                           gACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCa                                           <  2:765429/140‑1 (MQ=255)

                                                                                                tactTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGgag                                                >  2:153837/1‑130 (MQ=255)

                                                                                                tactTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTa                                      <  1:527579/140‑1 (MQ=255)

                                                                                                tactTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGACTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGgag                                                <  1:153837/130‑1 (MQ=255)

                                                                                                 actTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTAt                                     <  1:417707/140‑1 (MQ=255)

                                                                                                     cGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATcgcg                                 <  2:515782/140‑1 (MQ=255)

                                                                                                        cccGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATa                              >  2:941503/1‑140 (MQ=255)

                                                                                                         ccGAAATTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAg                             <  1:351185/140‑1 (MQ=255)

                                                                                                            aaaTTGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGa                          >  2:892227/1‑140 (MQ=255)

                                                                                                               ttGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAgg                       <  1:892227/140‑1 (MQ=255)

                                                                                                               ttGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAgg                       <  1:735162/140‑1 (MQ=255)

                                                                                                               ttGTTAGGCTATGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAgg                       <  2:885061/140‑1 (MQ=255)

                                                                                                                          tGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCTGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTc            >  1:960793/1‑140 (MQ=255)

                                                                                                                          tGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCTAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTc            >  2:928765/1‑140 (MQ=255)

                                                                                                                          tGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAgg                       >  1:919307/1‑129 (MQ=255)

                                                                                                                          tGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAgg                       <  2:919307/129‑1 (MQ=255)

                                                                                                                          tGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTc            >  1:89735/1‑140 (MQ=255)

                                                                                                                          tGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTc            >  2:591515/1‑140 (MQ=255)

                                                                                                                          tGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTc            >  2:834493/1‑140 (MQ=255)

                                                                                                                          tGCCTCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTc            >  2:1076367/1‑140 (MQ=255)

                                                                                                                              tCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGc        <  2:225090/140‑1 (MQ=255)

                                                                                                                              tCCCTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGc        <  2:89735/140‑1 (MQ=255)

                                                                                                                                ccTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGCCa      >  1:529678/1‑140 (MQ=255)

                                                                                                                                ccTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGCCa      >  2:685475/1‑140 (MQ=255)

                                                                                                                                ccTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGCCa      >  2:593007/1‑140 (MQ=255)

                                                                                                                                 cTGCGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGCCAg     <  1:685475/140‑1 (MQ=255)

                                                                                                                                    cGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGCCAgcgc  >  1:566030/1‑140 (MQ=255)

                                                                                                                                    cGTGCGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGCCAgcgc  >  1:1082652/1‑140 (MQ=255)

AGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGTGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGCCAGCGC  >  NC_000913/3254307‑3254578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A