Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I1 R1 106 90.3 3060316 99.2% 3035833 139.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 598,133 A→G T219A (ACC→GCC)  cusB → copper/silver export system membrane fusion protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913598,1330AG100.0% 216.6 / NA 58T219A (ACC→GCC) cusBcopper/silver export system membrane fusion protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (18/40);  total (18/40)

CGGCGACCCAGACTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCACCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGATGCCTCGCAGTT  >  NC_000913/597999‑598269
                                                                                                                                      |                                                                                                                                        
cGGCGACCCAGACTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGGTATTCGCCCCCCGATCGCCCCGCAAAAAAACCAGACTCGCCTTACGCCCAAAGCGCCCCTTGATGGCGTGGTCGCcccg                                                                                                                                     >  2:1329524/1‑140 (MQ=255)
cGGCGACCCAGACTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCcgcg                                                                                                                                     <  2:1458483/140‑1 (MQ=255)
     aCCCAGACTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATCCCGGCGGCGGGATTTCGTCCCCAGAACGCCACCCAAAAAATCCCGGCCCCCCTTTCGCCCAAAGCGCCCATTTACGGCGGGATCTCCGCCGTTGa                                                                                                                                >  2:1431279/1‑140 (MQ=255)
        cAGACTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAACGCCCATTGATGGCGTGATCGCCGCGTTTGATCt                                                                                                                             >  2:256874/1‑140 (MQ=255)
           aCTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTgcg                                                                                                                          <  2:859795/140‑1 (MQ=255)
           aCTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTgcg                                                                                                                          <  1:382464/140‑1 (MQ=255)
             tGAAGTCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTgcgcg                                                                                                                        <  2:1172054/140‑1 (MQ=255)
             tGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTgcgcg                                                                                                                        <  1:475847/140‑1 (MQ=255)
             tGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTgcgcg                                                                                                                        <  2:920487/140‑1 (MQ=255)
                     ttCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGgaatg                                                                                                                >  1:1031725/1‑140 (MQ=255)
                     ttCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGgaatg                                                                                                                >  1:1092368/1‑140 (MQ=255)
                         tGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAata                                                                                                            <  2:1301549/140‑1 (MQ=255)
                         tGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAata                                                                                                            <  1:784656/140‑1 (MQ=255)
                         tGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAACGCCCCTTGATGGCGTGGTCGCCCCGTTTGATCTGCGCGCGGGAAAGAata                                                                                                            >  2:956787/1‑140 (MQ=255)
                             cGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGc                                                                                                        <  2:405615/140‑1 (MQ=255)
                               gCTGCGACTGGCGGGAATGCCGGAGGCGGATATTTGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGGATGAATATCGccc                                                                                                      >  2:88933/1‑139 (MQ=255)
                               gCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCa                                                                                                      <  1:973099/140‑1 (MQ=255)
                               gCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCa                                                                                                      >  1:708048/1‑140 (MQ=255)
                                cTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCaa                                                                                                     <  1:1244979/140‑1 (MQ=255)
                                         gCGGGAATGCCGGAGGCGGATATTCGCCCCCCGATCGCCACGCAAAAAAACCAGACTCGCTTTACGCTCCAAGCGCCCCTTGATGGCGTGATCGCCCCGGTTGATCTGCGCGCGGGAATGAAAATCGCCAAAGAAAACgg                                                                                            >  2:1224673/1‑139 (MQ=255)
                                             gAATGCCGGAGGCGGATATTCGCCGCCCGATCGCCACGCAAAAAAACCCGACTCGCTTTACGCCCAAAGCGCCCCTTGATGGCGTGATCGCCCCGGTTGATCTGCGCCCGGGGAGGAAAATCGCCCAAGAAAACGTgggg                                                                                        >  2:791319/1‑138 (MQ=255)
                                                       ggCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTc                                                                              <  1:515092/140‑1 (MQ=255)
                                                       ggCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTc                                                                              <  1:414722/140‑1 (MQ=255)
                                                        gCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCa                                                                             <  1:1331129/140‑1 (MQ=255)
                                                        gCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCa                                                                             <  1:412685/140‑1 (MQ=255)
                                                             tatTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTa                                                                        <  2:1057932/140‑1 (MQ=255)
                                                             tatTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTa                                                                        <  1:85250/140‑1 (MQ=255)
                                                                 cgccgcTTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGa                                                                    <  2:1103859/140‑1 (MQ=255)
                                                                  gccgccTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGAc                                                                   <  1:588695/140‑1 (MQ=255)
                                                                  gccgccTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGAc                                                                   <  1:1329524/140‑1 (MQ=255)
                                                                  gccgccTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGAc                                                                   >  1:1322934/1‑140 (MQ=255)
                                                                   ccgccTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGAcc                                                                  <  2:258046/140‑1 (MQ=255)
                                                                   ccgccTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGAcc                                                                  <  2:351017/140‑1 (MQ=255)
                                                                   ccgccTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGAcc                                                                  <  1:1431279/140‑1 (MQ=255)
                                                                   ccgccTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGAcc                                                                  <  2:651180/140‑1 (MQ=255)
                                                                   ccgccTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGAcc                                                                  <  1:1282808/140‑1 (MQ=255)
                                                                      ccTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCgg                                                               >  2:61088/1‑140 (MQ=255)
                                                                        tGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGgtg                                                             <  2:222026/140‑1 (MQ=255)
                                                                        tGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGgtg                                                             <  1:1247991/140‑1 (MQ=255)
                                                                          aTCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGtgtg                                                           >  1:1034138/1‑140 (MQ=255)
                                                                                 cGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCAct                                                    >  1:598468/1‑140 (MQ=255)
                                                                                  gCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCActg                                                   >  1:589558/1‑140 (MQ=255)
                                                                                      aaaaTCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACtgctgc                                               <  2:120214/140‑1 (MQ=255)
                                                                                            cAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATccc                                         >  2:1330934/1‑140 (MQ=255)
                                                                                              gACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCgg                                       <  2:863724/140‑1 (MQ=255)
                                                                                              gACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCgg                                       <  2:1031725/140‑1 (MQ=255)
                                                                                              gACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCgg                                       <  1:479267/140‑1 (MQ=255)
                                                                                               aCTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGa                                      <  1:713751/140‑1 (MQ=255)
                                                                                                   gCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCt                                  <  2:1048484/140‑1 (MQ=255)
                                                                                                        aCGCTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGc                             <  2:708048/140‑1 (MQ=255)
                                                                                                           cTCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCctg                          >  1:953600/1‑140 (MQ=255)
                                                                                                            tCAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCctgg                         <  1:1060580/140‑1 (MQ=255)
                                                                                                             cAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCctggc                        >  2:290289/1‑140 (MQ=255)
                                                                                                             cAAAGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCctggc                        >  1:1044688/1‑140 (MQ=255)
                                                                                                               aaGCGCCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCctggctg                      >  2:105620/1‑140 (MQ=255)
                                                                                                                 gcgcCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGt                    <  2:589558/140‑1 (MQ=255)
                                                                                                                   gcCCATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGa                  >  2:252630/1‑140 (MQ=255)
                                                                                                                    cccATTGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCCGGCTGGTGaa                 >  1:83653/1‑140 (MQ=255)
                                                                                                                        ttGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGAt             >  1:606640/1‑140 (MQ=255)
                                                                                                                        ttGATGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGAt             >  1:502544/1‑140 (MQ=255)
                                                                                                                            tGGCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGATGCCt         <  2:1092368/140‑1 (MQ=255)
                                                                                                                             ggCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGATGCCTc        <  2:158744/140‑1 (MQ=255)
                                                                                                                             ggCGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGATGCCTc        <  2:1322934/140‑1 (MQ=255)
                                                                                                                               cGTGATCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGATGCCTCGc      <  1:722644/140‑1 (MQ=255)
                                                                                                                                   aTCGCCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACGCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGGTGCCTCGCAGtt  >  1:221563/1‑140 (MQ=255)
                                                                                                                                      |                                                                                                                                        
CGGCGACCCAGACTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCACCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGATGCCTCGCAGTT  >  NC_000913/597999‑598269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A