Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F28 I1 R1	106	90.3	3060316	99.2%	3035833	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,183,161	T→C	E164G (GAA→GGA)	yegX ←	putative hydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,183,161	0	T	C	100.0%	214.7 / NA	58	E164G (GAA→GGA)	yegX	putative hydrolase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (22/36); total (22/36)

TGAAATAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTTCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCT  >  NC_000913/2183024‑2183297

tGAAATAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGtcct                                                                                                                                        >  1:1099663/1‑140 (MQ=255)

tGAAATAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGtcct                                                                                                                                        >  2:1371670/1‑140 (MQ=255)

tGAAATAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGtcct                                                                                                                                        >  2:508786/1‑140 (MQ=255)

  aaaTAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTATCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGtccttc                                                                                                                                      >  2:78645/1‑140 (MQ=255)

  aaaTAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGtccttc                                                                                                                                      >  1:1087676/1‑140 (MQ=255)

   aaTAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTccttct                                                                                                                                     <  1:69516/140‑1 (MQ=255)

   aaTAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTccttct                                                                                                                                     <  2:371907/140‑1 (MQ=255)

   aaTAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTccttct                                                                                                                                     <  1:1423826/140‑1 (MQ=255)

       gCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGt                                                                                                                                 >  2:1154776/1‑140 (MQ=255)

        cccGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTc                                                                                                                                >  2:1016040/1‑140 (MQ=255)

          cGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCa                                                                                                                              >  2:898609/1‑140 (MQ=255)

          cGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCa                                                                                                                              >  2:128672/1‑140 (MQ=255)

          cGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCa                                                                                                                              >  1:211112/1‑140 (MQ=255)

            ccAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGc                                                                                                                            >  1:1215264/1‑140 (MQ=255)

             cAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCa                                                                                                                           >  2:1273414/1‑140 (MQ=255)

                aTTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACgg                                                                                                                        >  1:610751/1‑140 (MQ=255)

                   ggTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAg                                                                                                                     >  1:1117064/1‑140 (MQ=255)

                         aTAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAAt                                                                                                               <  1:129559/140‑1 (MQ=255)

                         aTAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAAt                                                                                                               >  2:749264/1‑140 (MQ=255)

                         aTAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAACACGGCAGGGAAAt                                                                                                               <  2:1223308/140‑1 (MQ=255)

                          tAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATc                                                                                                              >  1:1236036/1‑140 (MQ=255)

                             aaaaCGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGcc                                                                                                           <  1:1049065/140‑1 (MQ=255)

                               aaCGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCtt                                                                                                         >  1:1257563/1‑140 (MQ=255)

                               aaCGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCtt                                                                                                         >  1:666047/1‑140 (MQ=255)

                               aaCGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCtt                                                                                                         <  1:1034104/140‑1 (MQ=255)

                                   gCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGTCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTga                                                                                                     >  1:1089441/1‑140 (MQ=255)

                                   gCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTga                                                                                                     >  1:843727/1‑140 (MQ=255)

                                    cTCCTGAGTAAATAATCGGCTTTTCCCCCGTACTTTTTTCGCCCATTTTTAGCCACTGACTTACCTGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTgag                                                                                                    <  2:1499531/140‑1 (MQ=255)

                                              aataatCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCg                                                                                          <  2:678706/140‑1 (MQ=255)

                                                   tCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGc                                                                                     <  1:1334024/140‑1 (MQ=255)

                                                   tCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGc                                                                                     <  1:674896/140‑1 (MQ=255)

                                                   tCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGc                                                                                     <  2:148829/140‑1 (MQ=255)

                                                    cGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCa                                                                                    >  1:788078/1‑140 (MQ=255)

                                                     ggCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAg                                                                                   >  2:676421/1‑140 (MQ=255)

                                                          tttCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAaata                                                                              <  1:154245/140‑1 (MQ=255)

                                                            tCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAaataat                                                                            <  2:1117064/140‑1 (MQ=255)

                                                                    cTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCctg                                                                    <  1:32633/140‑1 (MQ=255)

                                                                      tttttCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCctgaa                                                                  >  1:7941/1‑140 (MQ=255)

                                                                      tttttCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCctgaa                                                                  <  2:217533/140‑1 (MQ=255)

                                                                      tttttCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTGGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCctgaa                                                                  <  1:973734/140‑1 (MQ=255)

                                                                          tCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCctgaactga                                                              <  2:1236036/140‑1 (MQ=255)

                                                                           cGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCctgaactgaa                                                             <  1:898718/140‑1 (MQ=255)

                                                                           cGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCctgaactgaa                                                             <  1:516248/140‑1 (MQ=255)

                                                                            gACCATTTTTAGCCACTGACTTTCCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCGCCGTTTGCAGAAATAATCTCGCCTGAACTGAAg                                                            <  2:708310/140‑1 (MQ=255)

                                                                            gACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAg                                                            <  2:1362049/140‑1 (MQ=255)

                                                                                        ccACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACg                                                <  1:676421/140‑1 (MQ=255)

                                                                                          aCTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACggg                                              <  2:1099663/140‑1 (MQ=255)

                                                                                          aCTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACggg                                              <  2:666047/140‑1 (MQ=255)

                                                                                           cTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACgggg                                             <  1:898609/140‑1 (MQ=255)

                                                                                           cTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACgggg                                             >  1:948699/1‑140 (MQ=255)

                                                                                           cTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACgggg                                             <  2:375026/140‑1 (MQ=255)

                                                                                           cTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACgggg                                             <  2:720645/140‑1 (MQ=255)

                                                                                           cTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACgggg                                             <  2:1257563/140‑1 (MQ=255)

                                                                                             gACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGgag                                           <  1:508786/140‑1 (MQ=255)

                                                                                                ttACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGaaa                                        <  2:610751/140‑1 (MQ=255)

                                                                                                  tcccGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAaata                                      <  1:519365/139‑1 (MQ=255)

                                                                                                  aCCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAaata                                      <  1:1040599/140‑1 (MQ=255)

                                                                                                  aCCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAaata                                      <  1:1276295/140‑1 (MQ=255)

                                                                                                  aCCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAaata                                      <  2:1087676/140‑1 (MQ=255)

                                                                                                       cTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGAt                                 <  2:530679/140‑1 (MQ=255)

                                                                                                       cTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGAt                                 >  2:722503/1‑140 (MQ=255)

                                                                                                        ttGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATa                                >  1:223169/1‑140 (MQ=255)

                                                                                                        ttGCGTAATTCTTTTGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATa                                >  1:1069287/1‑140 (MQ=255)

                                                                                                                    tttGCCGATAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACgcag                    <  2:1215264/140‑1 (MQ=255)

                                                                                                                            tAATTTTCCCCGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCAt            <  1:537197/140‑1 (MQ=255)

                                                                                                                               ttttCCCCGTCCTTCTCCGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCAtttt         <  2:843727/140‑1 (MQ=255)

                                                                                                                                      cGTCCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCGCCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATGCGCCCCACGCAGCAGGCCATTTTCGCGGCt  <  1:78645/140‑1 (MQ=255)

TGAAATAGCCCGCCAGATTGGTGTGATAAAAAACGGCTCCTGAGTAAATAATCGGCTTTTTCCCCGTACTTTTTTCGACCATTTTTAGCCACTGACTTACCCGCTTGCGTAATTCTTTTGCCGATAATTTTCCCCGTTCTTCTACGTCCAGCACGGCAGGGAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCT  >  NC_000913/2183024‑2183297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A