Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
106 |
90.3 |
3060316 |
99.2% |
3035833 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,528,811 |
C→T |
D456N (GAC→AAC) |
ligA ← |
DNA ligase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,528,811 | 0 | C | T | 100.0%
| 253.8
/ NA
| 73 | D456N (GAC→AAC) | ligA | DNA ligase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (34/39); total (34/39) |
TCCAGCGCGTTAACCACGTTTTGTGCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTCGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGTCAGAACCACAT > NC_000913/2528675‑2528947
|
tCCAGCGCGTTAACCACGTTTTGTGCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGcc < 1:1145166/140‑1 (MQ=255)
tCCAGCGCGTTAACCACGTTTTGTGCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGcc < 2:564092/140‑1 (MQ=255)
gcgcGTTAACCACGTTTTGTGCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCAtt < 2:1451651/140‑1 (MQ=255)
gcgcGTTAACCACGTTTTGTGCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCAtt < 2:770775/140‑1 (MQ=255)
cgcgTTAACCACGTTTTGTGCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTc > 2:785740/1‑140 (MQ=255)
gTTAACCACGTTTTGTGCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGt < 1:1507978/140‑1 (MQ=255)
aaCCACGTTTTGTGCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCaa > 1:1063617/1‑140 (MQ=255)
gtgCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCa < 1:676319/140‑1 (MQ=255)
gCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCAcg < 1:740142/140‑1 (MQ=255)
gATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCAcggcg > 2:140575/1‑140 (MQ=255)
gATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCAcggcg < 2:71794/140‑1 (MQ=255)
aTTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCAcggcgg < 2:1063617/140‑1 (MQ=255)
aTTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCAcggcgg < 1:204793/140‑1 (MQ=255)
cATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAgt > 2:1102315/1‑140 (MQ=255)
aTACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAgtg > 1:271218/1‑140 (MQ=255)
tCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAg < 1:549402/140‑1 (MQ=255)
tCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAg < 1:424689/140‑1 (MQ=255)
ccAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGc < 2:395434/140‑1 (MQ=255)
ccAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGc < 2:1369201/140‑1 (MQ=255)
cAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCg < 1:860141/140‑1 (MQ=255)
cAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCg < 2:1492981/140‑1 (MQ=255)
gTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGCCGGGAAACAAAGTGTTTCAGCGAc < 2:1120956/140‑1 (MQ=255)
gTCCGGTCAGTTTGCCTGCGGAGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGAc > 1:769607/1‑140 (MQ=255)
tCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGAct > 1:440211/1‑140 (MQ=255)
tCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGAct > 1:120776/1‑140 (MQ=255)
tCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGAct > 2:930779/1‑140 (MQ=255)
ggTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCtt > 1:233892/1‑140 (MQ=255)
tCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTa > 1:1424913/1‑140 (MQ=255)
tCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTa > 2:535675/1‑140 (MQ=255)
ttGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTg > 2:1433754/1‑140 (MQ=255)
gCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTgcg < 2:538832/140‑1 (MQ=255)
gTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCa > 2:1124252/1‑140 (MQ=255)
aGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAAt < 2:1194390/140‑1 (MQ=255)
ttGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAg < 2:54150/140‑1 (MQ=255)
ttGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAg < 2:899397/140‑1 (MQ=255)
ttGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAg < 2:324232/140‑1 (MQ=255)
gAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGc < 1:844447/140‑1 (MQ=255)
gAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGc < 1:287387/140‑1 (MQ=255)
gATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCg > 1:362159/1‑140 (MQ=255)
aTCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCgg > 1:1231006/1‑140 (MQ=255)
aTCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCgg > 2:861917/1‑140 (MQ=255)
cTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTa < 1:445041/140‑1 (MQ=255)
ccGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAg > 1:1334911/1‑140 (MQ=255)
gAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCgg > 1:77375/1‑140 (MQ=255)
gTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGc < 2:120776/140‑1 (MQ=255)
tATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCa > 2:1243912/1‑140 (MQ=255)
ggACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAAcc < 1:1102315/140‑1 (MQ=255)
gACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCg < 2:1183016/140‑1 (MQ=255)
gACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCg > 1:705203/1‑140 (MQ=255)
atatTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCtt < 2:1486568/140‑1 (MQ=255)
tatTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTc > 1:1303609/1‑140 (MQ=255)
atTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCa > 2:409752/1‑140 (MQ=255)
atTCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCa > 2:317628/1‑140 (MQ=255)
ttCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCTGGCAACCGCTTCAc > 2:1093079/1‑140 (MQ=255)
ttCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCAc > 2:280976/1‑140 (MQ=255)
ttCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCAc > 2:1463789/1‑140 (MQ=255)
ttCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCAc > 1:316063/1‑140 (MQ=255)
ttCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCAc > 1:336270/1‑140 (MQ=255)
ttCTTTTTCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCAc > 1:865899/1‑140 (MQ=255)
ttCAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTccc > 1:1083920/1‑139 (MQ=255)
cAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCcaca < 1:694353/140‑1 (MQ=255)
cAACCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCcaca < 2:865899/140‑1 (MQ=255)
aaCCAGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCacac > 1:48875/1‑140 (MQ=255)
aGCTGATCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTc < 1:1133959/140‑1 (MQ=255)
aTCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGt < 2:1081425/140‑1 (MQ=255)
tCGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGTc > 2:55566/1‑140 (MQ=255)
cGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGTCa < 1:930779/140‑1 (MQ=255)
cGATGATTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGTCa < 2:1231006/140‑1 (MQ=255)
atgatTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCCGCGCACCGCAAATCAGGCCACCGGTACAGCGGCCAACCGCTTCACCTTCCACCCACTCAACGTCAGa > 2:1309401/1‑140 (MQ=255)
atTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGTCAGAAcc < 2:1129932/140‑1 (MQ=255)
atTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGTCAGAAcc < 2:77375/140‑1 (MQ=255)
atTTTGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGTCAGAAcc < 2:271218/140‑1 (MQ=255)
tGTTGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGTCAGAACCACAt < 1:140575/140‑1 (MQ=255)
|
TCCAGCGCGTTAACCACGTTTTGTGCCGATTTTGGCCCCATACGCTCCAGTCCGGTCAGTTTGCCTGCGGTGAGTTTGAACAGATCTGCCGGAGTATGGACATATTCTTTTTCAACCAGCTGATCGATGATTTTGTCGCCCATTCCGTCAACATCCATCGCACGGCGGGAAACAAAGTGTTTCAGCGACTCTTTACGCTGCGCACCGCAAATCAGGCCACCGGTACAGCGGGCAACCGCTTCACCTTCCACACGCTCAACGTCAGAACCACAT > NC_000913/2528675‑2528947
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
