Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F28 I1 R1
|
162 |
93.0 |
3098984 |
99.0% |
3067994 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,806,470 |
T→C |
V34A (GTG→GCG) |
pfkB → |
6‑phosphofructokinase II |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,806,470 | 0 | T | C | 100.0%
| 328.9
/ NA
| 88 | V34A (GTG→GCG) | pfkB | 6‑phosphofructokinase II |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (62/26); total (62/26) |
GTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGTGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGATGAAAATGTCCCC > NC_000913/1806336‑1806606
|
gTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCg > 1:926621/1‑140 (MQ=255)
aaaTCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGggc > 2:1254970/1‑140 (MQ=255)
aaaTCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGggc > 2:67020/1‑140 (MQ=255)
aaaTCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGggc > 1:677428/1‑140 (MQ=255)
aTCAGCCTATAGGAGGGAACGATGGTACGTATCTATACGCTGACACTTGCGCCCTCCCTCGAGAGCGCAACAATTACCCCGCAAATTTAACCCGAAGGAAACCTGCGCTGTACCCCACCGGCGTTCGAACCCgggctcgc > 2:875494/1‑135 (MQ=255)
tCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGggcggc < 1:715735/140‑1 (MQ=255)
gCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGggcggcggc > 1:709179/1‑140 (MQ=255)
gCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGggcggcggc > 2:418153/1‑140 (MQ=255)
gaAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGc > 2:329670/1‑140 (MQ=255)
aaTGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTATCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGccc > 2:1175774/1‑140 (MQ=255)
aaTGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGccc > 1:369571/1‑140 (MQ=255)
tgatgGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCcgc > 1:596906/1‑140 (MQ=255)
tgatgGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCcgc > 2:736818/1‑140 (MQ=255)
tgatgGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCcgc > 1:1373123/1‑140 (MQ=255)
tgatgGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCcgc > 1:802495/1‑140 (MQ=255)
tgGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGcc > 1:890090/1‑140 (MQ=255)
tACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCAtt > 2:372192/1‑140 (MQ=255)
tATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGccc < 1:744116/140‑1 (MQ=255)
tATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGccc < 2:621312/140‑1 (MQ=255)
tATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGccc > 2:182780/1‑140 (MQ=255)
tATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGccc < 1:30884/140‑1 (MQ=255)
tATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGccc > 2:811560/1‑140 (MQ=255)
tataCGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCt > 1:408155/1‑140 (MQ=255)
taCGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTg > 1:230299/1‑140 (MQ=255)
taCGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTg > 1:1457114/1‑140 (MQ=255)
tGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGGGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGc < 1:203676/140‑1 (MQ=255)
tGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGc > 1:263665/1‑140 (MQ=255)
tGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGc > 1:1521764/1‑140 (MQ=255)
tGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGc > 1:291547/1‑140 (MQ=255)
tGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGc > 1:1152136/1‑140 (MQ=255)
tGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGc > 2:1266191/1‑140 (MQ=255)
tGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGc > 2:1481457/1‑140 (MQ=255)
tGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCCGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGc > 2:1031551/1‑140 (MQ=255)
gACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCa > 2:903987/1‑140 (MQ=255)
gACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCa > 2:935060/1‑140 (MQ=255)
gACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCa > 1:987595/1‑140 (MQ=255)
gACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCa > 1:1465474/1‑140 (MQ=255)
gACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCa > 1:826126/1‑140 (MQ=255)
acacTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAg > 2:1076092/1‑140 (MQ=255)
acacTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAg > 2:311949/1‑140 (MQ=255)
acacTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAg > 1:634630/1‑140 (MQ=255)
acacTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAg > 1:379862/1‑140 (MQ=255)
acacTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAg > 2:386272/1‑140 (MQ=255)
tGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCca > 2:430210/1‑140 (MQ=255)
cgcCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCcaca > 1:1180268/1‑140 (MQ=255)
cccTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGc > 2:1437807/1‑140 (MQ=255)
tctctcGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGAt > 2:529201/1‑140 (MQ=255)
ctctcGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGAATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATc > 2:949547/1‑140 (MQ=255)
tctcGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCt > 1:427489/1‑140 (MQ=255)
gATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTccc < 1:1254970/140‑1 (MQ=255)
gATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTccc > 1:13201/1‑140 (MQ=255)
gcgcAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCcggcg > 1:786697/1‑140 (MQ=255)
cgcAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCcggcgg > 1:15883/1‑140 (MQ=255)
cgcAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCcggcgg > 2:651319/1‑140 (MQ=255)
cgcAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCcggcgg > 1:664868/1‑140 (MQ=255)
cgcAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCcggcgg > 2:1529835/1‑140 (MQ=255)
cgcAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCCGCATCAACGTCGCCCGCGCCATTGTCCATCTTGGAGGCAGTGCCACAGCGATCTTCCcggcgg > 1:735181/1‑140 (MQ=255)
cgcAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGACGGCGTCATCAACGTGCCCCACGCCATTGCCCATCTTGGAGGCAGAGCCACAGAGATCTTCCcggcgg > 2:605728/1‑140 (MQ=255)
gcAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCggg > 2:199773/1‑140 (MQ=255)
gcAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGCGGGCGACGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCggg > 1:1394518/1‑140 (MQ=255)
aacaaTTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCTACAGCGATCTTCCCGGCGGGTg > 1:775436/1‑140 (MQ=255)
aacaaTTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCggggg > 1:486122/1‑138 (MQ=255)
aacaaTTACCCCGCAAATTTATCCCGAAAGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTg > 1:566129/1‑140 (MQ=255)
caaTTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGgc > 2:1030468/1‑140 (MQ=255)
aaTTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGgcg < 1:811560/140‑1 (MQ=255)
aaTTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGgcg < 1:182780/140‑1 (MQ=255)
tACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGa < 1:372192/140‑1 (MQ=255)
tACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGa < 1:935060/140‑1 (MQ=255)
ccccGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGAcc < 2:926621/140‑1 (MQ=255)
cccGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGGGGcgcggacc > 2:958865/1‑136 (MQ=255)
cAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGa > 2:315294/1‑140 (MQ=255)
aTTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAaca > 2:1132457/1‑140 (MQ=255)
ttATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACAcc < 2:263665/140‑1 (MQ=255)
ttATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACAcc < 1:1529835/140‑1 (MQ=255)
ttATCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACAcc < 2:677428/140‑1 (MQ=255)
tCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTgg > 1:286827/1‑140 (MQ=255)
tCCCGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGCGGCGCGACCGGCGAAAACCTgg > 1:1181898/1‑140 (MQ=255)
cccGAAGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGt < 2:727319/140‑1 (MQ=255)
aaGGAAAACTGCGCTGTACCGCACCGGCGTTCGAACCCCGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCa < 1:1031551/140‑1 (MQ=255)
cTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGc < 1:1481457/140‑1 (MQ=255)
cTGCGCTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGc < 2:596906/140‑1 (MQ=255)
gcgcTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCG‑‑GAACACCTGGTTTCACTGTTGGCGGAt < 1:529201/140‑1 (MQ=255)
cgcTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGa < 1:736818/140‑1 (MQ=255)
gcTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGAt < 2:814067/140‑1 (MQ=255)
gcTGTACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGAt > 2:841298/1‑140 (MQ=255)
tACCGCACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCTACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGATGaaa < 2:775436/140‑1 (MQ=255)
cACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGATGAAAATGTc < 2:1465474/140‑1 (MQ=255)
cACCGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGATGAAAATGTc < 1:1437807/140‑1 (MQ=255)
ccGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGATGAAAATGTccc < 1:1132457/140‑1 (MQ=255)
cGGCGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGATGAAAATGTcccc < 2:408155/140‑1 (MQ=255)
|
GTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGTGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGATGAAAATGTCCCC > NC_000913/1806336‑1806606
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
