Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F28 I1 R1
|
126 |
72.5 |
2472046 |
99.4% |
2457213 |
138.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,936,765 |
T→C |
G394G (GGT→GGC) |
fucI → |
L‑fucose isomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,936,765 | 0 | T | C | 100.0%
| 299.1
/ NA
| 82 | G394G (GGT→GGC) | fucI | L‑fucose isomerase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (45/37); total (45/37) |
TCACCAGCTCACCGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGTTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCGAATGGTGCCCGGCGATCCACGAA > NC_000913/2936630‑2936900
|
tCACCAGCTCACTGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTctg > 2:899643/1‑140 (MQ=255)
tCACCAGCTCACCGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTctg > 1:529846/1‑140 (MQ=255)
tCACCAGCTCACCGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTctg < 1:194575/140‑1 (MQ=255)
aGCTCACCGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTgcg < 2:667589/140‑1 (MQ=255)
gCTCACCGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTgcgc < 2:478724/140‑1 (MQ=255)
gCTCACCGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTgcgc > 2:733558/1‑140 (MQ=255)
cGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACg > 2:345536/1‑140 (MQ=255)
ggCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACgg < 1:479544/140‑1 (MQ=255)
ggCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACgg < 2:529846/140‑1 (MQ=255)
ggCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACgg < 1:427167/140‑1 (MQ=255)
gCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACgg > 2:356795/1‑139 (MQ=255)
gCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACgg < 1:356795/139‑1 (MQ=255)
gCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGt > 2:675904/1‑140 (MQ=255)
cTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGt > 1:949463/1‑140 (MQ=255)
tCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTa < 1:435295/140‑1 (MQ=255)
tATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAaacaa < 1:899643/140‑1 (MQ=255)
tttGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAAcg > 1:538323/1‑140 (MQ=255)
tGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAAcgcg > 2:583895/1‑140 (MQ=255)
cGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACa > 2:356701/1‑140 (MQ=255)
gATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAg < 1:736535/140‑1 (MQ=255)
aTGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGc > 1:378166/1‑140 (MQ=255)
gtgCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGa > 1:107140/1‑140 (MQ=255)
aCTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCcg > 2:54002/1‑140 (MQ=255)
cTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCcga > 1:122402/1‑140 (MQ=255)
cTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCcga > 1:49133/1‑140 (MQ=255)
ggTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCcgacg > 1:1218804/1‑140 (MQ=255)
gTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCcgacga < 2:78242/140‑1 (MQ=255)
gTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCcgacga > 2:454438/1‑140 (MQ=255)
gTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCcgacga < 1:345536/140‑1 (MQ=255)
tCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGAt > 1:1065091/1‑140 (MQ=255)
tCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGAt < 1:480102/140‑1 (MQ=255)
cACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATg > 1:1180004/1‑140 (MQ=255)
aCCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGa > 1:1102537/1‑140 (MQ=255)
aCCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGa > 1:927304/1‑140 (MQ=255)
cAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAg < 2:107140/140‑1 (MQ=255)
cAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAg < 1:356701/140‑1 (MQ=255)
cAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAg < 2:378166/140‑1 (MQ=255)
aaGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGc > 1:371685/1‑138 (MQ=255)
aaGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGc < 2:371685/138‑1 (MQ=255)
aaGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCca > 1:567836/1‑140 (MQ=255)
aaGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCca > 1:810023/1‑140 (MQ=255)
aaGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCca > 1:1170378/1‑140 (MQ=255)
gCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCcaca > 1:869166/1‑140 (MQ=255)
aTTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTg < 2:810023/140‑1 (MQ=255)
tGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTggg > 1:328590/1‑140 (MQ=255)
aGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGaa < 2:1170378/140‑1 (MQ=255)
aGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGaa < 2:567836/140‑1 (MQ=255)
aGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGaa > 2:475199/1‑140 (MQ=255)
cGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAAt < 1:475199/140‑1 (MQ=255)
tAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAAtctct < 2:122402/140‑1 (MQ=255)
tAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAAtctct < 2:328590/140‑1 (MQ=255)
ggggCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCcaca < 2:124040/123‑1 (MQ=255)
ggggCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCcaca > 1:124040/1‑123 (MQ=255)
ggggCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGc > 1:178577/1‑140 (MQ=255)
gggCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGc < 1:1027285/139‑1 (MQ=255)
gggCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGc > 2:1027285/1‑139 (MQ=255)
ggCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCaa > 1:871963/1‑140 (MQ=255)
ggCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCaa > 1:379326/1‑140 (MQ=255)
atggaCTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCt > 2:283567/1‑140 (MQ=255)
atggaCTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCt > 2:947550/1‑140 (MQ=255)
gaCTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGTACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGc > 1:1060910/1‑140 (MQ=255)
aCTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGcc > 1:394725/1‑140 (MQ=255)
aCTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGcc > 2:44730/1‑140 (MQ=255)
aCTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGcc > 2:934829/1‑140 (MQ=255)
aCTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGcc > 1:797616/1‑140 (MQ=255)
cTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCt < 1:947550/140‑1 (MQ=255)
cTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCt < 1:44730/140‑1 (MQ=255)
gCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTcgc < 1:944228/140‑1 (MQ=255)
gCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTcgc < 2:927304/140‑1 (MQ=255)
gCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTcgc < 2:869166/140‑1 (MQ=255)
gCAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTcgc < 2:1102537/140‑1 (MQ=255)
cAGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTcgcc > 1:763984/1‑140 (MQ=255)
aGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTcgccg < 2:1180004/140‑1 (MQ=255)
aGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTcgccg < 2:871963/140‑1 (MQ=255)
aGAACACGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTcgccg < 2:379326/140‑1 (MQ=255)
cacGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTAc > 1:9697/1‑140 (MQ=255)
cGGCATCATCCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCg > 2:1220473/1‑140 (MQ=255)
ggCATCATCCATTTGATCAACTCCTGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCt > 2:117308/1‑128 (MQ=255)
ggCATCATCCATTTGATCAACTCCTGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCt < 1:117308/128‑1 (MQ=255)
tcCATTTGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCTGCTACCGAATGGTGc > 1:364350/1‑140 (MQ=255)
tttGATCACCCCCGGCTTTGCTGCGCTGGAGGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCGAATGGTGCCCgg < 1:583895/140‑1 (MQ=255)
tGATCAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCGAATGGTGCCCGGCg < 1:454438/140‑1 (MQ=255)
cAACTCCGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCGAATGGTGCCCGGCGATcc < 2:49133/140‑1 (MQ=255)
cAACCCCGGCTGTGTTGCGCTGGCCGGTTCCTGTAAACAACGCAACAGCAAGGGTAACCCGACGATGAAGCCACACTGGGAAATCCCTCAGCAAGAGGCTGCCGCTTGCCTCGCCGCTACCGAATGGTGCCCGGCGATcc < 2:797616/140‑1 (MQ=255)
ccGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCGAATGGTGCCCGGCGATCCACGaa < 2:538323/140‑1 (MQ=255)
ccGGCTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCGAATGGTGCCCGGCGATCCACGaa < 2:9697/140‑1 (MQ=255)
|
TCACCAGCTCACCGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGTTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCGAATGGTGCCCGGCGATCCACGAA > NC_000913/2936630‑2936900
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
