Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I1 R1 108 95.2 3177646 99.2% 3152224 139.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,457,034 C→T A202V (GCC→GTC)  paaE → phenylacetyl‑CoA 1,2‑epoxidase, reductase subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,457,0340CT100.0% 212.8 / NA 64A202V (GCC→GTC) paaEphenylacetyl‑CoA 1,2‑epoxidase, reductase subunit
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (32/32);  total (32/32)

CGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGCCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGTTTAATACG  >  NC_000913/1456901‑1457167
                                                                                                                                     |                                                                                                                                     
cGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCt                                                                                                                                 >  1:569816/1‑140 (MQ=255)
  ccAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCtta                                                                                                                               >  1:513151/1‑138 (MQ=255)
  ccAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCa                                                                                                                               >  1:611613/1‑140 (MQ=255)
     ggCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTa                                                                                                                            >  1:61160/1‑140 (MQ=255)
      gCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTaa                                                                                                                           >  1:238484/1‑140 (MQ=255)
          tGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAAtttt                                                                                                                       <  2:465721/140‑1 (MQ=255)
            gCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCg                                                                                                                     <  2:328205/140‑1 (MQ=255)
            gCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCg                                                                                                                     <  2:53643/140‑1 (MQ=255)
                aCCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGAGCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCtt                                                                                                                 >  1:1577982/1‑140 (MQ=255)
                 ccTGAAAGACAAATATCCTCAGCGTTTACAGGTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCttt                                                                                                                <  2:1518018/140‑1 (MQ=255)
                  cTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTa                                                                                                               >  2:505011/1‑140 (MQ=255)
                  cTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTa                                                                                                               >  1:312391/1‑140 (MQ=255)
                     aaaGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTatga                                                                                                            <  2:1137658/140‑1 (MQ=255)
                      aaGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTatgat                                                                                                           >  2:1451345/1‑140 (MQ=255)
                           aaaTATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGc                                                                                                      >  1:327645/1‑140 (MQ=255)
                            aaTATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCa                                                                                                     <  1:770097/140‑1 (MQ=255)
                                       cGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTgg                                                                                          >  1:1541256/1‑140 (MQ=255)
                                          ttACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTcc                                                                                       >  1:966380/1‑140 (MQ=255)
                                             cAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCcggc                                                                                    <  2:1545497/140‑1 (MQ=255)
                                               gttgttGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCcggcgg                                                                                  <  2:233261/140‑1 (MQ=255)
                                               gttgttGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCcggcgg                                                                                  <  1:1137383/140‑1 (MQ=255)
                                                 tgttgtGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGgcggcg                                                                                <  2:1230663/140‑1 (MQ=255)
                                                   ttgtGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCgat                                                                              >  2:306764/1‑140 (MQ=255)
                                                       gCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGatgatg                                                                          >  2:1515501/1‑140 (MQ=255)
                                                          ttttCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATgatggat                                                                       >  2:1573470/1‑140 (MQ=255)
                                                          ttttCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATgatggat                                                                       <  2:1217082/140‑1 (MQ=255)
                                                             tcagtcagGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGAc                                                                    >  2:1036572/1‑140 (MQ=255)
                                                                  cagGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGa                                                               <  2:499367/140‑1 (MQ=255)
                                                                     gAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAAc                                                            <  1:790016/140‑1 (MQ=255)
                                                                           cTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCtt                                                      >  2:778535/1‑140 (MQ=255)
                                                                           cTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCtt                                                      >  1:1576037/1‑140 (MQ=255)
                                                                            tCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTa                                                     <  1:886799/140‑1 (MQ=255)
                                                                               aCAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTaaaa                                                  <  1:505011/140‑1 (MQ=255)
                                                                               aCAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTaaaa                                                  >  2:279621/1‑140 (MQ=255)
                                                                                  gCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCa                                               <  2:1330587/140‑1 (MQ=255)
                                                                                  gCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCa                                               <  2:47928/140‑1 (MQ=255)
                                                                                  gCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCa                                               <  1:393334/140‑1 (MQ=255)
                                                                                   cGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCAc                                              >  1:260584/1‑140 (MQ=255)
                                                                                       cTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTggg                                          <  2:1541256/140‑1 (MQ=255)
                                                                                       cTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTggg                                          <  2:26690/140‑1 (MQ=255)
                                                                                       cTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTggg                                          <  2:966380/140‑1 (MQ=255)
                                                                                        tGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGa                                         >  1:142638/1‑140 (MQ=255)
                                                                                           ttCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATg                                      <  1:1538604/140‑1 (MQ=255)
                                                                                               cGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACGGCCTTAAAAGCACTGGGAATGCCAg                                  >  1:630657/1‑140 (MQ=255)
                                                                                               cGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAg                                  >  1:1131670/1‑140 (MQ=255)
                                                                                                gggCGTATTGACGGTGAAAAATTACAGTCGGTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGGGGCGATGATGGATGACGCGGAAGCCGCCTTAAAAGCACTGGGAATGCCAGa                                 <  2:1232513/140‑1 (MQ=255)
                                                                                                   cGTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATaa                              <  1:1515501/140‑1 (MQ=255)
                                                                                                    gTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATaaa                             >  2:1042940/1‑140 (MQ=255)
                                                                                                    gTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATaaa                             >  1:917436/1‑140 (MQ=255)
                                                                                                    gTATTGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATaaa                             >  1:657919/1‑140 (MQ=255)
                                                                                                        tGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCa                         <  2:238484/140‑1 (MQ=255)
                                                                                                        tGACGGTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCa                         <  1:1546310/140‑1 (MQ=255)
                                                                                                            ggTGAAAAATTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCa                     >  1:1270291/1‑140 (MQ=255)
                                                                                                                  aaaTTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGa               <  2:721743/140‑1 (MQ=255)
                                                                                                                   aaTTACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAg              <  1:699635/140‑1 (MQ=255)
                                                                                                                     ttACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCg            <  2:260584/140‑1 (MQ=255)
                                                                                                                     ttACAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCg            <  2:327645/140‑1 (MQ=255)
                                                                                                                        cAGTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGtt         >  2:1264346/1‑140 (MQ=255)
                                                                                                                          gTCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGTTTa       >  1:491389/1‑140 (MQ=255)
                                                                                                                           tCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGTTTaa      <  2:142638/140‑1 (MQ=255)
                                                                                                                           tCACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGCTTaa      <  1:1003736/140‑1 (MQ=255)
                                                                                                                            cACTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGTTTAAt     >  1:17151/1‑140 (MQ=255)
                                                                                                                             aCTTGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGTTTAATa    >  2:414903/1‑140 (MQ=255)
                                                                                                                               ttGGGGTCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGTTTAATACg  >  2:1094070/1‑140 (MQ=255)
                                                                                                                                     |                                                                                                                                     
CGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGCCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGTTTAATACG  >  NC_000913/1456901‑1457167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A