Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F28 I1 R1
|
108 |
95.2 |
3177646 |
99.2% |
3152224 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,201,043 |
T→C |
intergenic (‑78/‑164) |
ygiF ← / → ygiM |
inorganic triphosphatase/putative signal transduction protein (SH3 domain) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,201,043 | 0 | T | C | 100.0%
| 399.9
/ NA
| 103 | intergenic (‑78/‑164) | ygiF/ygiM | inorganic triphosphatase/putative signal transduction protein (SH3 domain) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (59/44); total (59/44) |
Only 100 of 106 total aligned reads displayed.
CAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGTATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATC > NC_000913/3200909‑3201174
|
gCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTgcgc > 2:396608/1‑140 (MQ=255)
gCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTgcgc > 1:63178/1‑140 (MQ=255)
ccTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGcc > 2:684738/1‑140 (MQ=255)
cTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTGCTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCa < 2:546614/140‑1 (MQ=255)
cAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCaaa < 2:792547/140‑1 (MQ=255)
cAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCaaa < 1:154622/140‑1 (MQ=255)
aaCGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAAt > 2:829247/1‑140 (MQ=255)
cGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTg > 1:12310/1‑140 (MQ=255)
cTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATg > 1:14501/1‑140 (MQ=255)
ttAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACgg < 2:1528415/140‑1 (MQ=255)
aaCAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGc > 1:1055425/1‑140 (MQ=255)
tAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAAttt > 2:1566143/1‑140 (MQ=255)
tAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAAttt > 2:498499/1‑140 (MQ=255)
aaCTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGa > 2:25623/1‑140 (MQ=255)
aaCTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGa > 2:183500/1‑140 (MQ=255)
aaCTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGa > 1:193095/1‑140 (MQ=255)
aCTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGAc < 1:1451803/140‑1 (MQ=255)
tCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTaa < 1:474574/140‑1 (MQ=255)
tCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTaa < 1:26902/140‑1 (MQ=255)
ccTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTg < 2:1542624/140‑1 (MQ=255)
ccTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTg < 1:259532/140‑1 (MQ=255)
gAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAg < 2:697089/140‑1 (MQ=255)
aGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGc < 2:63178/140‑1 (MQ=255)
aGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGc < 2:182051/140‑1 (MQ=255)
aGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGc < 1:1186320/140‑1 (MQ=255)
gCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCa < 1:940680/140‑1 (MQ=255)
gCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCa < 1:966422/140‑1 (MQ=255)
ccATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAg < 2:69208/140‑1 (MQ=255)
tGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTgg > 1:328180/1‑140 (MQ=255)
tGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTgg > 1:1582656/1‑140 (MQ=255)
tGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTgg > 2:97017/1‑140 (MQ=255)
tGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTgg < 2:1354754/140‑1 (MQ=255)
tGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCG‑ACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGc > 2:5898/1‑140 (MQ=255)
ggCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGc > 2:750251/1‑140 (MQ=255)
gCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCa < 2:601336/140‑1 (MQ=255)
gCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCa < 1:844638/140‑1 (MQ=255)
gCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCa < 2:151168/140‑1 (MQ=255)
gCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCa < 1:619/140‑1 (MQ=255)
gCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCa > 2:903625/1‑140 (MQ=255)
tttACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGa > 1:932747/1‑140 (MQ=255)
tgcTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTGAATGCGATCTTGTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGGcc < 2:979875/138‑1 (MQ=255)
tACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGAcc > 2:1514299/1‑140 (MQ=255)
tATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGac > 2:812230/1‑140 (MQ=255)
aTCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGaca > 1:496797/1‑140 (MQ=255)
aTCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGaca > 2:598986/1‑140 (MQ=255)
aTCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGaca > 1:299172/1‑140 (MQ=255)
aTCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGaca > 2:1092734/1‑140 (MQ=255)
aTCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGaca > 2:7570/1‑140 (MQ=255)
aTCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACCGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGaca > 2:1007481/1‑140 (MQ=255)
tCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGacac > 2:179849/1‑140 (MQ=255)
tCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAAGTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGacac > 2:1253096/1‑140 (MQ=255)
ggTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGGCGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACag < 1:111609/140‑1 (MQ=255)
tATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAgg < 1:444549/140‑1 (MQ=255)
aTGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGa > 2:1366694/1‑140 (MQ=255)
aTGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGa > 2:149218/1‑140 (MQ=255)
tGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGAt > 1:449198/1‑140 (MQ=255)
caTAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGa > 2:905879/1‑140 (MQ=255)
caTAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGa < 1:25623/140‑1 (MQ=255)
aTAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGAt > 2:676866/1‑140 (MQ=255)
aTAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGAt > 1:393578/1‑140 (MQ=255)
aTAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCACCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGAt > 1:1285210/1‑140 (MQ=255)
tAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGAtt > 2:1132041/1‑140 (MQ=255)
aaGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTg < 1:829247/140‑1 (MQ=255)
gTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGAt > 1:1317418/1‑140 (MQ=255)
tGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATg > 2:634839/1‑140 (MQ=255)
gACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGt > 2:1295586/1‑140 (MQ=255)
aCGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTc > 1:911939/1‑140 (MQ=255)
cGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCg > 1:1159555/1‑140 (MQ=255)
cGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCg > 2:1069686/1‑140 (MQ=255)
gATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGa > 1:830317/1‑140 (MQ=255)
gATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGa < 2:299172/140‑1 (MQ=255)
aTGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGaa > 2:553562/1‑140 (MQ=255)
tGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAAt > 1:753460/1‑140 (MQ=255)
cGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCtt > 1:1027841/1‑140 (MQ=255)
gCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTg < 1:905879/140‑1 (MQ=255)
gCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTg < 1:97017/140‑1 (MQ=255)
aaCTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGt < 2:1582656/140‑1 (MQ=255)
cTTAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAg < 2:14501/140‑1 (MQ=255)
tAATGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCg < 1:682545/140‑1 (MQ=255)
aaTGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGa < 1:776497/140‑1 (MQ=255)
aTGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGac < 1:1440207/140‑1 (MQ=255)
aTGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGac > 2:154407/1‑140 (MQ=255)
aTGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGac < 1:183500/140‑1 (MQ=255)
tGCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGaca < 1:944882/140‑1 (MQ=255)
gCGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGacac < 2:193095/140‑1 (MQ=255)
cGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACt < 1:1253096/140‑1 (MQ=255)
cGATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATAGCCATGCAACGGTCAATTTGACGGGTGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACt < 2:1552056/140‑1 (MQ=255)
gATCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTg < 1:498499/140‑1 (MQ=255)
aTCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGTCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGa > 2:1179959/1‑140 (MQ=255)
aTCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGa > 1:649910/1‑140 (MQ=255)
aTCTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGa < 1:5898/140‑1 (MQ=255)
cTTTTTTGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATg > 1:312255/1‑140 (MQ=255)
ttttttGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGc < 2:1011659/140‑1 (MQ=255)
ttttttGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGc < 1:1079427/140‑1 (MQ=255)
tttttGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGcc > 2:1230924/1‑140 (MQ=255)
tttGTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCac > 2:1436502/1‑140 (MQ=255)
gTCAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCactac < 1:835947/140‑1 (MQ=255)
cAGTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCActacta > 2:1008341/1‑140 (MQ=255)
gTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATc > 2:724820/1‑140 (MQ=255)
gTAGATAGCATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGAACTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATc > 2:1559547/1‑140 (MQ=255)
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CAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATCGGTTATGTCACATAAGTGACGATGAACGGCGAACTTAATGCGATCTTTTTTGTCAGTAGATAGTATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATC > NC_000913/3200909‑3201174
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
