Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A25 F60 I1 R1
|
14 |
108.0 |
3679756 |
98.7% |
3631919 |
138.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,244,890 |
G→A |
A62A (GCC→GCT) |
malF ← |
maltose ABC transporter membrane subunit MalF |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,244,890 | 0 | G | A | 100.0%
| 398.9
/ NA
| 112 | A62A (GCC→GCT) | malF | maltose ABC transporter membrane subunit MalF |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (58/54); total (58/54) |
Only 100 of 114 total aligned reads displayed.
CTTCCTGCGCACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAGGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGA > NC_000913/4244754‑4245024
|
cTTCCTGCGCACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCt > 1:992854/1‑140 (MQ=255)
ttCCTGCGCACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCtt > 1:815987/1‑140 (MQ=255)
ttCCTGCGCACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCtt > 2:443408/1‑140 (MQ=255)
tCCTGCGCACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCttt > 2:1405921/1‑140 (MQ=255)
tCCTGCGCACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCttt > 2:559927/1‑140 (MQ=255)
ccTGCGCACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTa > 2:1387730/1‑140 (MQ=255)
gcgcACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGa > 1:1817975/1‑140 (MQ=255)
cACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTg > 2:684333/1‑140 (MQ=255)
aCGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTgg < 2:146559/140‑1 (MQ=255)
aCGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTgg < 2:886417/140‑1 (MQ=255)
aCGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTgg < 1:684333/140‑1 (MQ=255)
cGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGc > 1:694361/1‑140 (MQ=255)
cAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCACCAGGCGTAAGCTTTACGATTGGCGaaa > 2:1604416/1‑140 (MQ=255)
gTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAAtata < 1:739776/140‑1 (MQ=255)
gCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGc > 2:887920/1‑140 (MQ=255)
gTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCg > 1:1099964/1‑140 (MQ=255)
aGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCTTTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTg < 2:613014/140‑1 (MQ=255)
aGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTg < 2:110398/140‑1 (MQ=255)
ctgctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACt < 1:1387730/140‑1 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTg > 1:734215/1‑133 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTg < 2:734215/133‑1 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGaa > 2:1118073/1‑135 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGaa < 1:1118073/135‑1 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCaa > 1:806322/1‑140 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCaa > 2:1500777/1‑140 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCaa > 1:1024334/1‑140 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCaa > 1:21033/1‑140 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCaa > 2:397789/1‑140 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCaa > 1:1663901/1‑140 (MQ=255)
ctgTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCaa > 2:638998/1‑140 (MQ=255)
tAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAatat < 2:815987/140‑1 (MQ=255)
tAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAatat < 1:1365304/140‑1 (MQ=255)
tAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAatat < 1:638998/140‑1 (MQ=255)
ttGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAatat < 1:323192/137‑1 (MQ=255)
ttGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAatat > 2:323192/1‑137 (MQ=255)
ggTGGAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCg < 1:397789/140‑1 (MQ=255)
tGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCTGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTg > 1:1414050/1‑140 (MQ=255)
tGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTg > 2:348229/1‑140 (MQ=255)
tGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTg > 2:1427821/1‑140 (MQ=255)
aGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTa > 2:912426/1‑140 (MQ=255)
aGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTa > 2:620820/1‑140 (MQ=255)
aGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTa > 2:1423172/1‑140 (MQ=255)
aGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTa > 1:335621/1‑140 (MQ=255)
ggCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTaa < 1:1500777/140‑1 (MQ=255)
tGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGGGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCg < 2:1759991/140‑1 (MQ=255)
tGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCg < 2:1270105/140‑1 (MQ=255)
gCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGaa < 2:1037100/140‑1 (MQ=255)
gCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGaa < 2:1663901/140‑1 (MQ=255)
cGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAAc < 2:806322/140‑1 (MQ=255)
cGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAAc < 1:443408/140‑1 (MQ=255)
aTGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGaa < 1:1303081/137‑1 (MQ=255)
aTGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGaa > 2:1538734/1‑137 (MQ=255)
aTGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGaa > 2:1303081/1‑137 (MQ=255)
aTGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGaa < 1:1538734/137‑1 (MQ=255)
tGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAgg < 2:335621/140‑1 (MQ=255)
tGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAgg < 1:994174/140‑1 (MQ=255)
tGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAgg > 1:1059454/1‑140 (MQ=255)
ggTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGt > 2:1492095/1‑140 (MQ=255)
gTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTa < 1:1427821/140‑1 (MQ=255)
gCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTAtt > 2:1378560/1‑140 (MQ=255)
aCCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTcccc > 2:1541329/1‑140 (MQ=255)
agGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTtgtg > 2:1059736/1‑140 (MQ=255)
ggAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCg < 1:1405921/140‑1 (MQ=255)
agagGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCg < 2:464460/137‑1 (MQ=255)
agagGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCg < 2:252700/137‑1 (MQ=255)
agagGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCg > 1:464460/1‑137 (MQ=255)
agagGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCg > 1:252700/1‑137 (MQ=255)
agagGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTAc > 2:100083/1‑140 (MQ=255)
agGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTAc < 2:334685/138‑1 (MQ=255)
agGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTAc > 1:334685/1‑138 (MQ=255)
aCGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTaa < 2:401385/140‑1 (MQ=255)
aCGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTaa > 2:942442/1‑140 (MQ=255)
ataatCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAaaca < 1:1059736/140‑1 (MQ=255)
taatCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAaacaa < 2:21033/140‑1 (MQ=255)
cccATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAg > 2:87761/1‑140 (MQ=255)
tCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTCGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAAc > 1:1383009/1‑140 (MQ=255)
ccAGCCATTCCCGGGTAAACATAGCACCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAAcc < 1:1604416/140‑1 (MQ=255)
gCCATTCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACccac > 1:747674/1‑140 (MQ=255)
ttCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAAcc < 1:451082/133‑1 (MQ=255)
ttCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAAcc > 2:451082/1‑133 (MQ=255)
ttCCCGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACcagc < 1:1423172/140‑1 (MQ=255)
ccGGGTAAACATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAgg < 1:887920/140‑1 (MQ=255)
aaaCATAGCGCCAGTTGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGc < 1:907130/140‑1 (MQ=255)
aaaCATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGc < 2:34244/140‑1 (MQ=255)
aaaCATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGc < 2:1059454/140‑1 (MQ=255)
aaaCATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGc < 1:297638/140‑1 (MQ=255)
aaaCATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGc < 1:1541329/140‑1 (MQ=255)
aaCATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCa > 2:732297/1‑140 (MQ=255)
aCATAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTGAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAg > 2:1381113/1‑140 (MQ=255)
aTAGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGAc < 2:121354/140‑1 (MQ=255)
aGCGCCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCt > 1:331981/1‑140 (MQ=255)
gcgcCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTa > 1:1033975/1‑140 (MQ=255)
cgcCAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAg > 1:512894/1‑140 (MQ=255)
ccAGGCGTAAGCTTTACGATTGGCGAACATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTACCCATGTGCGTACATCAAAACAACAAGGTAACCCGCCAGCAGGCCGAGCAGACCTAGCa < 1:1779337/140‑1 (MQ=255)
ccAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCa < 2:635103/140‑1 (MQ=255)
ccAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCa < 1:732297/140‑1 (MQ=255)
ccAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCa < 1:348229/140‑1 (MQ=255)
ccAGGCGTAAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCa < 1:100083/140‑1 (MQ=255)
ggCGTTAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGc > 2:539398/1‑127 (MQ=255)
ggCGTTAGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGc < 1:539398/127‑1 (MQ=255)
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CTTCCTGCGCACGTTCAAAAGTCAGCTGGTTAGTGCTGCTGTAGTTGGTGAAGGCAATGGCGATGGTGCAGACCAGAGGGAAGAGGACGAATAATCCCATTCCAGCCATTCCCGGGTAAACATAGCGCCAGGCGTAGGCTTTACGATTGGCGAAAATATACAGCCCCGCTGAACTCAATATCAGCGTGGTAATGGCGAACAGGTATTCCCCTTGTGCGTACATTAAAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGA > NC_000913/4244754‑4245024
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
