Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A31 F60 I1 R1
|
19 |
77.8 |
2638074 |
98.7% |
2603779 |
138.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
1,299,499 |
Δ1,199 bp |
|
insH21 |
insH21 |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
1299499–1300697 |
1300697 |
1–1199 |
74 [0] |
[0] 76 |
insH21 |
insH21 |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 1299498 | 0 (0.000) | 70 (0.940) |
51/266 |
0.2 |
100% |
intergenic (+253/‑33) |
ychE/insH21 |
putative inner membrane protein/IS5 transposase and trans‑activator |
| ? | NC_000913 |
1300698 = |
0 (0.000) | intergenic (+151/‑484) |
insH21/oppA |
IS5 transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein |
GATK/CNVnator alignment
N/A
