Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A37 F60 I1 R1	21	79.1	2697330	98.7%	2662264	138.3

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	931,182	T→A	D290V (GAT→GTT)	trxB ←	thioredoxin reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	931,182	0	T	A	100.0%	267.8 / NA	78	D290V (GAT→GTT)	trxB	thioredoxin reductase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (42/36); total (42/36)

ATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGA  >  NC_000913/931045‑931316

aTGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAAcc                                                                                                                                      >  2:910904/1‑140 (MQ=255)

    tgtCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCa                                                                                                                                  >  1:1138941/1‑140 (MQ=255)

    tgtCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCa                                                                                                                                  >  1:946245/1‑140 (MQ=255)

    tgtCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCa                                                                                                                                  >  1:926284/1‑140 (MQ=255)

      tCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACg                                                                                                                                >  2:1230382/1‑140 (MQ=255)

      tCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACg                                                                                                                                >  2:955701/1‑140 (MQ=255)

      tCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACg                                                                                                                                >  2:714053/1‑140 (MQ=255)

            tcttTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCt                                                                                                                          >  1:897849/1‑140 (MQ=255)

             cttTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTg                                                                                                                         >  2:241683/1‑140 (MQ=255)

                    tttGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCaaa                                                                                                                  <  1:385346/140‑1 (MQ=255)

                       gTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGAc                                                                                                               <  1:910904/140‑1 (MQ=255)

                        ttACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACg                                                                                                              >  1:369728/1‑140 (MQ=255)

                             gATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAgg                                                                                                         >  2:981168/1‑140 (MQ=255)

                               tttGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAg                                                                                                          <  2:960001/137‑1 (MQ=255)

                               tttGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAg                                                                                                          >  1:960001/1‑137 (MQ=255)

                                 tGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATg                                                                                                     <  2:1325931/140‑1 (MQ=255)

                                  gTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGc                                                                                                    <  1:241683/140‑1 (MQ=255)

                                          attTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTgg                                                                                            >  2:600885/1‑140 (MQ=255)

                                           ttttGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTggg                                                                                           <  2:926284/140‑1 (MQ=255)

                                           ttttGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTggg                                                                                           <  2:1138941/140‑1 (MQ=255)

                                           ttttGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTggg                                                                                           <  2:86900/140‑1 (MQ=255)

                                             ttGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTg                                                                                         >  1:879370/1‑140 (MQ=255)

                                                cGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCa                                                                                      <  2:879370/140‑1 (MQ=255)

                                                cGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCa                                                                                      <  2:30617/140‑1 (MQ=255)

                                                cGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCa                                                                                      <  1:291839/140‑1 (MQ=255)

                                                  tCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCAtt                                                                                    >  1:1332931/1‑140 (MQ=255)

                                                    aGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTAc                                                                                  <  1:600885/140‑1 (MQ=255)

                                                     gCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTAcc                                                                                 <  1:1230382/140‑1 (MQ=255)

                                                     gCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTAcc                                                                                 <  1:1240486/140‑1 (MQ=255)

                                                     gCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTAcc                                                                                 <  1:955701/140‑1 (MQ=255)

                                                          aCCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGaa                                                                            >  1:518417/1‑140 (MQ=255)

                                                            cATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAAtt                                                                          <  2:1289370/140‑2 (MQ=255)

                                                            cATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATa                                                                          <  2:193216/140‑1 (MQ=255)

                                                              tCGAGGTAGCGTTCCGCTTCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcc                                                                        >  2:286913/1‑140 (MQ=255)

                                                              tCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcc                                                                        >  1:484523/1‑140 (MQ=255)

                                                              tCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcc                                                                        >  2:151166/1‑140 (MQ=255)

                                                               cGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAccc                                                                       >  1:499554/1‑140 (MQ=255)

                                                               cGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAccc                                                                       >  2:1168959/1‑140 (MQ=255)

                                                               cGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAc                                                                         <  2:615712/138‑1 (MQ=255)

                                                               cGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAc                                                                         >  1:615712/1‑138 (MQ=255)

                                                                   gTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACt                                                                   <  1:1168959/140‑1 (MQ=255)

                                                                   gTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACt                                                                   <  2:36390/140‑1 (MQ=255)

                                                                   gTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACt                                                                   <  2:946245/140‑1 (MQ=255)

                                                                     aGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTa                                                                                   >  1:822357/1‑122 (MQ=255)

                                                                     aGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTa                                                                                   <  2:822357/122‑1 (MQ=255)

                                                                     aGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCAt                                                                               >  2:851874/1‑126 (MQ=255)

                                                                     aGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCAt                                                                               <  1:851874/126‑1 (MQ=255)

                                                                       cGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTAc                                                               >  2:579376/1‑140 (MQ=255)

                                                                       cGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTAc                                                               >  2:610358/1‑140 (MQ=255)

                                                                            cGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACt                                                                   >  2:884049/1‑131 (MQ=255)

                                                                            cGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACt                                                                   <  1:884049/131‑1 (MQ=255)

                                                                             gCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGAt                                                         <  2:499554/140‑1 (MQ=255)

                                                                                          ccATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTttcc                                            <  2:678686/140‑1 (MQ=255)

                                                                                            aTGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAg                                                     >  2:931482/1‑129 (MQ=255)

                                                                                            aTGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAg                                                     <  1:931482/129‑1 (MQ=255)

                                                                                                    tGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCt                                  >  2:134478/1‑140 (MQ=255)

                                                                                                    tGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCt                                  >  1:1178517/1‑140 (MQ=255)

                                                                                                    tGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCt                                  >  1:287511/1‑140 (MQ=255)

                                                                                                    tGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCt                                  <  1:29727/140‑1 (MQ=255)

                                                                                                    tGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCt                                  >  2:1154758/1‑140 (MQ=255)

                                                                                                    tGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCt                                  >  2:1329686/1‑140 (MQ=255)

                                                                                                    tGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCt                                  >  2:39669/1‑140 (MQ=255)

                                                                                                           gCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTc                           >  1:832971/1‑140 (MQ=255)

                                                                                                           gCCGAAGTAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTc                           >  2:1214345/1‑140 (MQ=255)

                                                                                                                aGTAATGGCCTGGCGATAAATGTTAACCATCACGTCGCCTGCGGCAAAGACGCCAGGCATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGaaaa                      >  2:714325/1‑140 (MQ=255)

                                                                                                                  tAATGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATc                    >  2:1168112/1‑140 (MQ=255)

                                                                                                                    aTGGCCTGGCGATAAATGTGACCCATCCCGTCGCCTGCGGCAAAGACGCAAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGc                  <  2:1178517/140‑1 (MQ=255)

                                                                                                                    aTGGCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGc                  <  2:287511/140‑1 (MQ=255)

                                                                                                                      ggCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAg                <  2:518417/140‑1 (MQ=255)

                                                                                                                      ggCCTGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCCTCGAAAATCGCAg                >  1:1284329/1‑140 (MQ=255)

                                                                                                                          tGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCg                   <  2:617659/133‑1 (MQ=255)

                                                                                                                          tGGCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCg                   >  1:617659/1‑133 (MQ=255)

                                                                                                                            gCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAg                >  2:751288/1‑134 (MQ=255)

                                                                                                                            gCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAg                <  1:751288/134‑1 (MQ=255)

                                                                                                                            gCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCg          >  2:731654/1‑140 (MQ=255)

                                                                                                                            gCGATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCg          <  1:731654/140‑1 (MQ=255)

                                                                                                                              gATAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCggg        <  2:1087250/140‑1 (MQ=255)

                                                                                                                                tAAATGTGAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCt      <  2:897849/140‑1 (MQ=255)

                                                                                                                                    tgtgAACCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGa  <  2:92951/140‑1 (MQ=255)

ATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGA  >  NC_000913/931045‑931316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A