Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A17 F60 I1 R1 17 25.6 870458 98.8% 860012 138.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,446,769 Δ11 bp coding (505‑515/906 nt) feaR ← DNA‑binding transcriptional activator FeaR

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1446769 1446779 11 18 [0] [0] 18 feaR DNA‑binding transcriptional activator FeaR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 14467680 (0.000)18 (0.710) 18/274 0.4 100% coding (516/906 nt) feaR DNA‑binding transcriptional activator FeaR
?NC_000913 1446780 = 0 (0.000)coding (504/906 nt) feaR DNA‑binding transcriptional activator FeaR

GATK/CNVnator alignment

N/A