Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A14 F60 I1 R1 20 85.9 2954762 98.8% 2919304 138.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,614,426 Δ66 bp coding (213‑278/1389 nt) sad ← NAD(+)‑dependent succinate semialdehyde dehydrogenase

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1614426 1614491 66 69 [0] [0] 69 sad NAD(+)‑dependent succinate semialdehyde dehydrogenase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16144250 (0.000)67 (0.800) 45/266 0.6 100% coding (279/1389 nt) sad NAD(+)‑dependent succinate semialdehyde dehydrogenase
?NC_000913 1614492 = 0 (0.000)coding (212/1389 nt) sad NAD(+)‑dependent succinate semialdehyde dehydrogenase

GATK/CNVnator alignment

N/A