Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F60 I1 R1
|
20 |
85.9 |
2954762 |
98.8% |
2919304 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,578,997 |
G→T |
P114H (CCT→CAT) |
mcrB ← |
5‑methylcytosine‑specific restriction enzyme subunit McrB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,578,997 | 0 | G | T | 100.0%
| 458.1
/ NA
| 127 | P114H (CCT→CAT) | mcrB | 5‑methylcytosine‑specific restriction enzyme subunit McrB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (65/62); total (65/62) |
Only 100 of 127 total aligned reads displayed.
ATAACACTCTTGCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTAGGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAAT > NC_000913/4578862‑4579132
|
aTAACACTCTTGCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGata < 2:16546/140‑1 (MQ=255)
aTAACACTCTTGCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATCTTTTATGata < 2:268202/140‑1 (MQ=255)
tAACACTCTTGCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGatat < 2:1040051/140‑1 (MQ=255)
acTCTTGCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATacac > 1:1411913/1‑140 (MQ=255)
acTCTTGCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATacac > 1:1234343/1‑140 (MQ=255)
ctctTGCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACAcc > 2:811964/1‑140 (MQ=255)
ttGCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGa > 2:4553/1‑140 (MQ=255)
gCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAg > 1:888570/1‑140 (MQ=255)
ccAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGt < 1:918124/140‑1 (MQ=255)
aTTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATActct > 1:628175/1‑140 (MQ=255)
tataGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCg < 2:832318/140‑1 (MQ=255)
ataGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGa < 1:541522/140‑1 (MQ=255)
ataGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGa < 2:1411913/140‑1 (MQ=255)
ataGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGa < 1:811964/140‑1 (MQ=255)
taGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGAt < 1:851647/140‑1 (MQ=255)
gTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGttt > 2:115320/1‑140 (MQ=255)
ttGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGtttt > 2:935664/1‑140 (MQ=255)
tgtCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCt > 1:396316/1‑140 (MQ=255)
tCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGa > 1:285048/1‑140 (MQ=255)
ccAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGaa > 2:1473179/1‑140 (MQ=255)
gCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAagag < 1:59840/140‑1 (MQ=255)
cATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAgaga > 2:31327/1‑140 (MQ=255)
cATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAgaga > 2:566101/1‑140 (MQ=255)
cATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAgaga > 1:1043820/1‑140 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCTAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGc > 1:562173/1‑140 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTa > 2:618802/1‑123 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTa < 1:618802/123‑1 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGaa > 2:779081/1‑136 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGaa < 1:779081/136‑1 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGc > 1:145476/1‑140 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGc > 2:450249/1‑140 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGc > 2:835404/1‑140 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGc > 2:947439/1‑140 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGc > 2:17522/1‑140 (MQ=255)
agGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGc > 2:1080401/1‑140 (MQ=255)
cAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCAt < 1:566101/140‑1 (MQ=255)
cAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCAt < 1:1473179/140‑1 (MQ=255)
aaTCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTg > 1:533552/1‑140 (MQ=255)
gtgtAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCAtg < 2:376643/140‑1 (MQ=255)
gtgtAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCAtg < 2:396316/140‑1 (MQ=255)
tCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTc > 2:1202217/1‑140 (MQ=255)
tCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTc > 1:1059015/1‑140 (MQ=255)
aaTACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCAt < 1:444576/140‑1 (MQ=255)
ccTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCAtg < 1:959165/127‑1 (MQ=255)
ccTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCAtg > 2:959165/1‑127 (MQ=255)
ccTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCgtg < 2:888570/140‑1 (MQ=255)
cTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCgtgt < 2:533552/140‑1 (MQ=255)
tgtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCAt < 2:314549/124‑1 (MQ=255)
tgtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTc < 1:778450/131‑1 (MQ=255)
tgtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTc > 2:778450/1‑131 (MQ=255)
tgtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTc > 2:652274/1‑140 (MQ=255)
tgtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTc > 1:787459/1‑140 (MQ=255)
tgtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTc > 1:1195871/1‑140 (MQ=255)
tgtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTc < 2:787459/140‑1 (MQ=255)
gtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCg > 2:611995/1‑140 (MQ=255)
gtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCg > 2:4845/1‑140 (MQ=255)
gtgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCg > 2:1124264/1‑140 (MQ=255)
tgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACGCCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCgt < 2:355716/135‑1 (MQ=255)
tgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCgt > 1:355716/1‑135 (MQ=255)
tgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGc > 1:1241552/1‑140 (MQ=255)
tgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGc > 2:144814/1‑140 (MQ=255)
tgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGc > 2:1333826/1‑140 (MQ=255)
tgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGc > 1:1049743/1‑140 (MQ=255)
tgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCAAGTGGTTCATTCgt < 1:706081/135‑1 (MQ=255)
tgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCAAGTGGTTCATTCgt > 2:706081/1‑135 (MQ=255)
tgAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTNTAGGTATGTCTGAAGNNAACTGCCATTGGGCATGTGGTTCATTCGTGTCGc > 2:222772/1‑140 (MQ=255)
gagaCTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCt > 1:368021/1‑140 (MQ=255)
agaCTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCtt > 1:248717/1‑140 (MQ=255)
gaCTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTta < 2:628175/140‑1 (MQ=255)
gaCTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTta < 1:450249/140‑1 (MQ=255)
tttGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCa < 1:947439/140‑1 (MQ=255)
tttGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCa < 1:1159123/140‑1 (MQ=255)
ttGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCAt < 1:1202217/140‑1 (MQ=255)
gCGTAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAATTACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAAc > 1:1317161/1‑140 (MQ=255)
tAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCaa < 2:1090007/140‑1 (MQ=255)
tAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCaa < 2:183665/140‑1 (MQ=255)
tAATAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCaa > 1:1090007/1‑140 (MQ=255)
aaTAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAAc < 1:17522/140‑1 (MQ=255)
aTAGGACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACt > 1:144619/1‑140 (MQ=255)
gACTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATaa < 1:462458/123‑1 (MQ=255)
aCTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCGACtcatca > 1:1456171/1‑140 (MQ=255)
aCTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACtcatca > 1:1048100/1‑140 (MQ=255)
cTGTCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCaa > 1:62993/1‑140 (MQ=255)
tCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCaaa < 1:737654/138‑1 (MQ=255)
tCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCaaa > 2:737654/1‑138 (MQ=255)
tCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAAt > 1:185940/1‑140 (MQ=255)
tCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAAt < 2:62993/140‑1 (MQ=255)
tCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAAt > 1:2399/1‑140 (MQ=255)
tCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAAt < 2:185940/140‑1 (MQ=255)
tCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAAt < 1:4553/140‑1 (MQ=255)
tCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAAt < 1:1139771/140‑1 (MQ=255)
tCCGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAAt < 2:1195871/140‑1 (MQ=255)
cGTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCt > 2:1415976/1‑140 (MQ=255)
gTATTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCtt < 2:1049743/140‑1 (MQ=255)
aTTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCGAAACCAACTCATCAAAATCTTta < 1:757838/140‑1 (MQ=255)
aTTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCaaa > 1:901564/1‑133 (MQ=255)
aTTTTTTATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCaaa < 2:901564/133‑1 (MQ=255)
tttATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTataat < 2:1456171/140‑1 (MQ=255)
tttATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTataat < 1:115320/140‑1 (MQ=255)
ttATGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTataat < 2:490023/139‑1 (MQ=255)
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ATAACACTCTTGCCAGAATTAAATATTAATTTATAGTCGTTGATTATGTTGTCCAGCATAGAGGCAAATCGGGTGTAATCAATACCCTGTGAGACTTTTTGGGAACAGGCGTAATAGGACTGTCCGTATTTTTTAGGATATACACCCGAAGTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAAT > NC_000913/4578862‑4579132
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
