Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F28 I1 R1 143 68.4 2327250 99.3% 2310959 138.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,039,205 G→A P180L (CCG→CTG)  xerD ← site‑specific recombinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,039,2050GA100.0% 260.8 / NA 72P180L (CCG→CTG) xerDsite‑specific recombinase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (33/39);  total (33/39)

TCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACGGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAGCATGGCTTTAT  >  NC_000913/3039080‑3039340
                                                                                                                             |                                                                                                                                       
tCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGa                                                                                                                                 <  2:11815/134‑1 (MQ=255)
tCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGa                                                                                                                                 >  1:11815/1‑134 (MQ=255)
  tGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCttt                                                                                                                         >  2:820152/1‑140 (MQ=255)
  tGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCttt                                                                                                                         >  1:1054430/1‑140 (MQ=255)
     cgcgTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTttgtt                                                                                                                      <  1:779701/140‑1 (MQ=255)
        gTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGcc                                                                                                                   <  2:553915/140‑1 (MQ=255)
         tCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCt                                                                                                                  >  1:801725/1‑140 (MQ=255)
          cATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCtt                                                                                                                 <  2:679022/140‑1 (MQ=255)
                 tgcGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTCCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAAt                                                                                                          <  2:1118436/140‑1 (MQ=255)
                  gcgcACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATg                                                                                                         >  2:895787/1‑140 (MQ=255)
                     cACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCaa                                                                                                           <  1:655803/135‑1 (MQ=255)
                     cACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCaa                                                                                                           >  2:655803/1‑135 (MQ=255)
                     cACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGAcc                                                                                                      >  2:982687/1‑140 (MQ=255)
                      aCGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGAccc                                                                                                     <  1:969563/140‑1 (MQ=255)
                          tggctggGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCtt                                                                                                                 >  2:134500/1‑124 (MQ=255)
                          tggctggGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCtt                                                                                                                 <  1:134500/124‑1 (MQ=255)
                          tggctggGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCa                                                                                                            >  1:965941/1‑129 (MQ=255)
                          tggctggGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCa                                                                                                            <  2:965941/129‑1 (MQ=255)
                            gctggGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTCCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCa                                                                                               <  2:669735/140‑1 (MQ=255)
                                      aacaCGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTGCCAATGACCCGTACCACGCCCTGACg                                                                                     >  1:812046/1‑140 (MQ=255)
                                      aacaCGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACg                                                                                     >  1:79364/1‑140 (MQ=255)
                                         acGTCAATTAACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAg                                                                                  <  1:820152/140‑1 (MQ=255)
                                          cGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAgg                                                                                 <  1:4426/140‑1 (MQ=255)
                                           gtaaaTTGACACCCATTTCACCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGc                                                                                <  2:812046/137‑1 (MQ=255)
                                           gTCAATTGACCCACCATCCAGCAGCCACGGACGCCCATGTCCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGc                                                                                <  2:1086653/140‑1 (MQ=255)
                                                ttGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGata                                                                           >  1:729959/1‑140 (MQ=255)
                                                 tGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGatat                                                                          <  1:118744/140‑1 (MQ=255)
                                                     ccacCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACt                                                                      <  1:591875/139‑1 (MQ=255)
                                                         cATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCAtt                                                                  >  2:145173/1‑140 (MQ=255)
                                                          aTTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTg                                                                 >  2:190044/1‑140 (MQ=255)
                                                             cagcagCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCa                                                              >  1:285137/1‑140 (MQ=255)
                                                              agcagcCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAg                                                             >  2:904842/1‑140 (MQ=255)
                                                               gcagcCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGt                                                            <  2:729959/140‑1 (MQ=255)
                                                                cagcCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACt                                                                      <  2:595365/129‑1 (MQ=255)
                                                                cagcCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACt                                                                      >  1:595365/1‑129 (MQ=255)
                                                                   ccACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGa                                                        >  1:715188/1‑140 (MQ=255)
                                                                   ccACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAATCCGa                                                        >  1:682505/1‑140 (MQ=255)
                                                                    cACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGAc                                                       <  1:982687/140‑1 (MQ=255)
                                                                    cACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGAc                                                       <  1:273934/140‑1 (MQ=255)
                                                                    cACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGAc                                                       <  1:190044/140‑1 (MQ=255)
                                                                    cACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGAc                                                       <  1:145173/140‑1 (MQ=255)
                                                                    cACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGAc                                                       <  1:1002849/140‑1 (MQ=255)
                                                                    cACGGACGCCCATGTTCCAGATAGGTTTCCAGCAAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGAc                                                       <  2:948651/140‑1 (MQ=255)
                                                                    cACGGACGCCATTTATCAAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGAc                                                       <  2:715188/140‑1 (MQ=255)
                                                                             ccATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCaga                                              >  2:302035/1‑140 (MQ=255)
                                                                             ccATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCaga                                              >  2:1003396/1‑140 (MQ=255)
                                                                              cATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCagag                                             <  2:79364/140‑1 (MQ=255)
                                                                                   tCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACg                                        <  1:1003396/140‑1 (MQ=255)
                                                                                   tCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACg                                        <  1:302035/140‑1 (MQ=255)
                                                                                     cAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCa                                      >  2:297943/1‑140 (MQ=255)
                                                                                        aTAGGTTTCCGGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGcc                                   <  1:482800/140‑1 (MQ=255)
                                                                                        aTAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGcc                                   <  1:993698/140‑1 (MQ=255)
                                                                                          aGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCg                                 <  1:674996/140‑1 (MQ=255)
                                                                                           ggTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACg                                        >  1:734997/1‑132 (MQ=255)
                                                                                           ggTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACg                                        <  2:734997/132‑1 (MQ=255)
                                                                                           ggTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCgg                                <  1:895787/140‑1 (MQ=255)
                                                                                            gTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGt                               >  2:1069234/1‑140 (MQ=255)
                                                                                            gTTTCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGt                               >  2:10401/1‑140 (MQ=255)
                                                                                               tCCAGCCAGTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGc                            >  1:691387/1‑140 (MQ=255)
                                                                                                ccagccagTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCa                           <  1:904842/140‑1 (MQ=255)
                                                                                                  agccagTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATa                         >  1:991294/1‑140 (MQ=255)
                                                                                                   gccagTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATac                        <  1:719992/140‑1 (MQ=255)
                                                                                                   gccagTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATac                        >  1:758990/1‑140 (MQ=255)
                                                                                                    ccagTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATaca                       <  1:10401/140‑1 (MQ=255)
                                                                                                    ccagTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATaca                       <  2:991294/140‑1 (MQ=255)
                                                                                                      agTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATacaac                     >  1:146712/1‑140 (MQ=255)
                                                                                                      agTAAACCGCCTCTTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATacaac                     >  1:1075821/1‑140 (MQ=255)
                                                                                                                ctctTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAGCa           <  2:1075821/140‑1 (MQ=255)
                                                                                                                  ctTCACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAGCATg         >  2:777606/1‑140 (MQ=255)
                                                                                                                     cACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAg             <  2:72537/133‑1 (MQ=255)
                                                                                                                     cACCTAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAg             >  1:72537/1‑133 (MQ=255)
                                                                                                                         tAACAGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAGCATGGCTTTAt  >  1:1150806/1‑140 (MQ=255)
                                                                                                                             |                                                                                                                                       
TCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTCCAGATAGGTTTCCAGCCAGTAAACCGCCTCTTCACCTAACGGCACCAGACGCTCTTTGTTGCCTTTACCAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAGCATGGCTTTAT  >  NC_000913/3039080‑3039340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A