Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,918,457	G→T	P310Q (CCG→CAG)	gudD ←	D‑glucarate dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,918,457	0	G	T	100.0%	425.5 / NA	123	P310Q (CCG→CAG)	gudD	D‑glucarate dehydratase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (77/46); total (77/46)

Only 100 of 133 total aligned reads displayed.

CGGCAACATGGGTAAACATCGCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCGGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAACCTTGCTCCG  >  NC_000913/2918320‑2918592

cggcAACATGGGTAAACATCGCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCtgg                                                                                                                                       >  1:1234139/1‑140 (MQ=255)

  gcAACATGGGTAAACATCGCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGat                                                                                                                                     >  1:1760801/1‑140 (MQ=255)

  gcAACATGGGTAAACATCGCCAGGGAAATATCGAAGTGGGTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGat                                                                                                                                     >  1:836438/1‑140 (MQ=255)

        tGGGTAAACATCGCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAAc                                                                                                                               <  1:1413322/140‑1 (MQ=255)

          ggTAAACATCGCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACgg                                                                                                                             <  1:1811797/140‑1 (MQ=255)

              aaCATCGCCAAGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTg                                                                                                                         <  1:865011/140‑1 (MQ=255)

                cATCGCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCa                                                                                                                       >  1:1266919/1‑140 (MQ=255)

                 aTCGCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAg                                                                                                                      >  1:2137866/1‑140 (MQ=255)

                    gCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGga                                                                                                                   >  1:444072/1‑140 (MQ=255)

                    gCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGga                                                                                                                   >  2:384372/1‑140 (MQ=255)

                    gCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGga                                                                                                                   <  2:1918644/140‑1 (MQ=255)

                    gCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGga                                                                                                                   >  2:1331036/1‑140 (MQ=255)

                    gCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGAGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGga                                                                                                                   >  2:1892447/1‑140 (MQ=255)

                     ccAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGgag                                                                                                                  >  1:813166/1‑140 (MQ=255)

                     ccAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGgag                                                                                                                  >  2:212960/1‑140 (MQ=255)

                     ccAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGgag                                                                                                                  <  1:1657020/140‑1 (MQ=255)

                                    aGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTTTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGgag                                                                                                                  >  2:864901/1‑125 (MQ=255)

                                        gttgttAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTgcc                                                                                               >  2:1789184/1‑140 (MQ=255)

                                        gttgttAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTgcc                                                                                               >  1:1459943/1‑140 (MQ=255)

                                        gttgttAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTgcc                                                                                               >  1:2134725/1‑140 (MQ=255)

                                         ttgttAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTgccg                                                                                              <  1:948280/140‑1 (MQ=255)

                                                  tgtgAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGt                                                                                     >  1:1644415/1‑140 (MQ=255)

                                                   gtgAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTg                                                                                    <  2:929543/140‑1 (MQ=255)

                                                    tgAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTgg                                                                                   <  2:1266919/140‑1 (MQ=255)

                                                    tgAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTgg                                                                                   >  1:2099193/1‑140 (MQ=255)

                                                    tgAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTgg                                                                                   >  1:413953/1‑140 (MQ=255)

                                                     aaaCCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTACAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGc                                                                                  <  2:813166/139‑1 (MQ=255)

                                                      aaCCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCg                                                                                 >  1:1147809/1‑140 (MQ=255)

                                                      aaCCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCg                                                                                 >  1:927824/1‑140 (MQ=255)

                                                      aaCCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCg                                                                                 >  2:429637/1‑140 (MQ=255)

                                                      aaCCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCg                                                                                 <  1:317113/140‑1 (MQ=255)

                                                      aaCCCCAGGACAGGCCAAATTCATGGCACATTTGCGCCACACGTTCCGAACCTTGCATTGTCCAGAAAGGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCg                                                                                 <  2:836438/140‑1 (MQ=255)

                                                        ccccAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGAt                                                                               <  1:1331036/140‑1 (MQ=255)

                                                        ccccAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGAt                                                                               <  1:385665/140‑1 (MQ=255)

                                                         cccAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATc                                                                              <  1:2149638/140‑1 (MQ=255)

                                                          ccAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCa                                                                             >  1:679681/1‑140 (MQ=255)

                                                           cAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCat                                                                            <  2:2134725/140‑1 (MQ=255)

                                                            aGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCata                                                                           >  2:1076334/1‑140 (MQ=255)

                                                            aGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCata                                                                           <  1:1560487/140‑1 (MQ=255)

                                                              gTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATAtt                                                                         >  2:304563/1‑140 (MQ=255)

                                                                cAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTgg                                                                       <  1:1041561/140‑1 (MQ=255)

                                                                  ggCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGtt                                                                     >  2:543892/1‑140 (MQ=255)

                                                                   gCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGttt                                                                    >  2:1745341/1‑139 (MQ=255)

                                                                   gCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGttt                                                                    >  1:300445/1‑139 (MQ=255)

                                                                   gCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTg                                                                    >  1:1842059/1‑140 (MQ=255)

                                                                   gCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTg                                                                    >  2:188490/1‑140 (MQ=255)

                                                                   gCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTg                                                                    >  1:1681461/1‑140 (MQ=255)

                                                                   gCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTg                                                                    >  2:442330/1‑140 (MQ=255)

                                                                   gCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTg                                                                    >  2:302523/1‑140 (MQ=255)

                                                                   gCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTg                                                                    >  1:1233982/1‑140 (MQ=255)

                                                                     cAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCa                                                                  <  1:1073353/140‑1 (MQ=255)

                                                                     cAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCa                                                                  <  2:444072/140‑1 (MQ=255)

                                                                     aaaaTTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCa                                                                  <  2:608099/139‑1 (MQ=255)

                                                                     aaaaTTCATGGCACATATGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGTGGGATATCAGCGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCa                                                                  <  2:1075777/139‑1 (MQ=255)

                                                                     aaaaTTAATGGCACATTTGCGCCACACGTAGCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGTTATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGTCGCCAGTCGGTGGCGATCATATTGATTGct                                                                  <  2:932178/139‑2 (MQ=255)

                                                                      aaaTTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAg                                                                 <  2:927824/140‑1 (MQ=255)

                                                                          tCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCgg                                                             <  2:679681/140‑1 (MQ=255)

                                                                             tGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAg                                                          >  1:1192686/1‑140 (MQ=255)

                                                                             tGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAg                                                          >  1:1781189/1‑140 (MQ=255)

                                                                             tGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAg                                                          >  1:2055767/1‑140 (MQ=255)

                                                                             tGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAg                                                          >  1:719924/1‑140 (MQ=255)

                                                                                   aTTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGt                                                    >  2:565983/1‑140 (MQ=255)

                                                                                        cgcCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTcgcgc                                               >  1:114630/1‑140 (MQ=255)

                                                                                          ccaccggTACCGACCCTTGAATTGTCAAGAAAGGCGGACCCGCGTGCTGGATATCAACGGATTGCGGGGAGAGCGTAGGGCCCATTTCCCGCCAGTGGGTGGGGATCATATTGGTTGCAGTCGGTAGCCCTGTCGCGCGa                                             <  2:1844665/134‑1 (MQ=255)

                                                                                              acGTCCCGAACCTTGCATTGTCCAGAAATGCGGATCGGACCGCTAGATATCAACGGATTGCAGGGAGAGCGTAAGGACCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCCGTCGGTAGACCTGTCGCGCGACGGa                                         <  2:1681461/140‑1 (MQ=255)

                                                                                                  aCCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAActc                                     >  1:1033532/1‑140 (MQ=255)

                                                                                                     gAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGc                                  <  2:1686300/140‑1 (MQ=255)

                                                                                                        ccTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCAt                               <  2:1033532/140‑1 (MQ=255)

                                                                                                        ccTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCAt                               >  2:1676970/1‑140 (MQ=255)

                                                                                                        ccTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCAt                               <  1:1587607/140‑1 (MQ=255)

                                                                                                        ccTTGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCAt                               <  2:2099193/140‑1 (MQ=255)

                                                                                                        ccTTGCATTGGCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCAt                               <  2:1234139/140‑1 (MQ=255)

                                                                                                           tGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCAc                            >  1:30085/1‑140 (MQ=255)

                                                                                                           tGCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCAc                            >  2:79870/1‑140 (MQ=255)

                                                                                                            gCATTGTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACt                           >  2:1704564/1‑140 (MQ=255)

                                                                                                                 gTCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACg                      >  1:1833941/1‑140 (MQ=255)

                                                                                                                  tCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCTCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGc                     <  2:1233982/140‑1 (MQ=255)

                                                                                                                  tCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGc                     >  1:82406/1‑140 (MQ=255)

                                                                                                                  tCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGc                     >  1:1086143/1‑140 (MQ=255)

                                                                                                                  tCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGc                     >  2:1809143/1‑140 (MQ=255)

                                                                                                                  tCCAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGc                     >  1:2111504/1‑140 (MQ=255)

                                                                                                                   ccAGAAATGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGcc                    <  1:858562/140‑1 (MQ=255)

                                                                                                                        aaTGCGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGgag               <  1:1699100/140‑1 (MQ=255)

                                                                                                                            cGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGgag               <  1:997607/136‑1 (MQ=255)

                                                                                                                            cGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAAc           >  2:1370626/1‑140 (MQ=255)

                                                                                                                            cGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAAc           >  2:1731904/1‑140 (MQ=255)

                                                                                                                            cGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAAc           >  2:1886961/1‑140 (MQ=255)

                                                                                                                            cGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAAc           >  1:243349/1‑140 (MQ=255)

                                                                                                                            cGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAAc           >  2:1878310/1‑140 (MQ=255)

                                                                                                                            cGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAAc           >  1:469459/1‑140 (MQ=255)

                                                                                                                            cGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAAc           >  2:1977535/1‑140 (MQ=255)

                                                                                                                            cGGATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAAc           >  1:593258/1‑140 (MQ=255)

                                                                                                                             ggATCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAGCTCTGCCATCACTTCACGCCCGGAGAAAcc          <  2:1450889/140‑1 (MQ=255)

                                                                                                                                tCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAACCTTg       <  2:1182892/140‑1 (MQ=255)

                                                                                                                                tCCGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAACCTTg       <  1:1076334/140‑1 (MQ=255)

                                                                                                                                 ccGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAACCTTGc      >  1:679052/1‑140 (MQ=255)

                                                                                                                                  cGCCAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAACCTTGCt     <  1:672858/140‑1 (MQ=255)

                                                                                                                                     cAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAACCTTGCTCCg  <  2:82406/140‑1 (MQ=255)

                                                                                                                                     cAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAACCTTGCTCCg  <  1:79870/140‑1 (MQ=255)

                                                                                                                                     cAGCTGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAACCTTGCTCCg  <  2:1003990/140‑1 (MQ=255)

CGGCAACATGGGTAAACATCGCCAGGGAAATATCGAAGTGGTTGTTAGAGTGTGAACCCCAGGTCAGGCCAAATTCATGGCACATTTGCGCCACACGTACCGAACCTTGCATTGTCCAGAAATGCGGATCCGCCAGCGGGATATCAACGGATTGCAGGGAGAGCGTATGGCCCATTTGCCGCCAGTCGGTGGCGATCATATTGGTTGCAGTCGGTAGACCTGTCGCGCGACGGAACTCTGCCATCACTTCACGCCCGGAGAAACCTTGCTCCG  >  NC_000913/2918320‑2918592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A