Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,040,706 |
G→T |
P40T (CCG→ACG) |
ygfX ← |
protein YgfX |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,040,706 | 0 | G | T | 100.0%
| 356.2
/ NA
| 104 | P40T (CCG→ACG) | ygfX | protein YgfX |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (51/53); total (51/53) |
Only 100 of 107 total aligned reads displayed.
CGATGCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGGGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGT > NC_000913/3040571‑3040837
|
cGATGCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACgtggtg > 1:2079619/1‑140 (MQ=255)
cGATGCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACgtggtg > 1:279026/1‑140 (MQ=255)
aTGCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTa > 1:601808/1‑140 (MQ=255)
aTGCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTa < 1:1237607/140‑1 (MQ=255)
gCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAAc > 2:1881998/1‑140 (MQ=255)
gCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAAc > 1:650823/1‑140 (MQ=255)
gCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAAc > 2:61470/1‑140 (MQ=255)
gCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAAc > 2:1057341/1‑140 (MQ=255)
gCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAAc > 2:707129/1‑140 (MQ=255)
cTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACt > 2:325542/1‑140 (MQ=255)
ccACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGa < 2:1182694/140‑1 (MQ=255)
ccACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGa < 2:1492702/140‑1 (MQ=255)
ccACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGa < 1:2079763/140‑1 (MQ=255)
cACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAg > 1:1808567/1‑140 (MQ=255)
cACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAg < 2:2006120/140‑1 (MQ=255)
cTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGcc < 2:2079619/140‑1 (MQ=255)
cTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGcc < 2:877010/140‑1 (MQ=255)
cTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGcc < 2:279026/140‑1 (MQ=255)
gCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAg > 2:499883/1‑140 (MQ=255)
cccTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAgg > 2:2091502/1‑140 (MQ=255)
cccTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAgg > 1:1161061/1‑140 (MQ=255)
cccTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAgg > 1:26250/1‑140 (MQ=255)
cccTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCACTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAgg > 1:1391811/1‑140 (MQ=255)
cTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGACCGCAATCAAACACCTCCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGc < 1:1679892/140‑1 (MQ=255)
cTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGc > 2:580538/1‑140 (MQ=255)
cTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGc < 1:707129/140‑1 (MQ=255)
cTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGc < 1:1112593/140‑1 (MQ=255)
tGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCAt < 2:601808/140‑1 (MQ=255)
gCCAACGCAAACGCCCGTCCGTCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg < 1:2034714/140‑1 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGc > 2:606020/1‑137 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGc < 1:606020/137‑1 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg > 1:2123400/1‑140 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg > 1:2125907/1‑140 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg > 1:275717/1‑140 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg > 2:596962/1‑140 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg < 2:258570/140‑1 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg < 1:61470/140‑1 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg > 1:340778/1‑140 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg < 1:1057341/140‑1 (MQ=255)
gCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATg < 2:340778/140‑1 (MQ=255)
cAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAg < 2:96684/140‑1 (MQ=255)
cAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAg < 1:833717/140‑1 (MQ=255)
cAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAg < 2:650823/140‑1 (MQ=255)
cGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTaa > 2:1728858/1‑140 (MQ=255)
aCGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGTATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATaa > 2:107985/1‑140 (MQ=255)
aCGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATaa < 1:2017786/140‑1 (MQ=255)
cGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCg < 2:363544/140‑1 (MQ=255)
gTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCgg > 2:1592210/1‑140 (MQ=255)
gTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCgg > 1:947364/1‑140 (MQ=255)
aTCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAAc < 1:1310168/140‑1 (MQ=255)
tCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGGAAAATAACAGCGGCAAcc < 2:1161061/140‑1 (MQ=255)
caacaaGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCa > 2:1189719/1‑140 (MQ=255)
gCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCAt > 2:166354/1‑140 (MQ=255)
gCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAACGGCAACCAGCCCAt > 2:1904597/1‑140 (MQ=255)
gAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGa < 1:166354/140‑1 (MQ=255)
aaTTTCCCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGa > 1:2073625/1‑140 (MQ=255)
aaTTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGaa > 2:1770784/1‑140 (MQ=255)
t‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAg < 1:445918/140‑1 (MQ=255)
ccccTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCa < 2:275717/140‑1 (MQ=255)
ccccTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCa < 1:2091502/140‑1 (MQ=255)
gCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCa < 2:752678/140‑1 (MQ=255)
ttAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACtg < 2:1549936/140‑1 (MQ=255)
aaTACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACtgtg < 1:1728858/140‑1 (MQ=255)
aTACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTgc > 1:2105617/1‑140 (MQ=255)
gccgcTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGCAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTgcgcgc > 1:526686/1‑140 (MQ=255)
ccgcTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGcc > 2:956658/1‑140 (MQ=255)
ctggctgCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAgg > 2:1653790/1‑140 (MQ=255)
ctggctgCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAgg > 2:316446/1‑140 (MQ=255)
ctggctgCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAgg > 2:793679/1‑140 (MQ=255)
ctggctgCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAgg > 1:471110/1‑140 (MQ=255)
ctggctgCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAgg > 1:1827346/1‑140 (MQ=255)
ctggctgCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAgg > 2:1029517/1‑140 (MQ=255)
tggctgCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGga > 1:820237/1‑140 (MQ=255)
tgCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGAcg < 1:1904597/140‑1 (MQ=255)
tgCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGAcg < 1:1770784/140‑1 (MQ=255)
gCGAACGCAATCAAACACCACCAGCGAAAGTAACCCCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGAcgc < 1:107985/140‑1 (MQ=255)
cGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGAcgcg < 1:292792/140‑1 (MQ=255)
cAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATc > 2:35761/1‑140 (MQ=255)
cAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGAt < 2:1391811/140‑1 (MQ=255)
cAAACACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGAt < 1:499883/140‑1 (MQ=255)
aaaaCACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGAt < 2:1949200/139‑1 (MQ=255)
aaCACCACCAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATATCAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTg < 2:1808567/140‑1 (MQ=255)
aaccaccAGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGcc < 2:947364/139‑1 (MQ=255)
caccaGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCcaca > 1:110090/1‑140 (MQ=255)
caccaGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCcaca < 1:1592210/140‑1 (MQ=255)
ccaGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAgg > 1:1875005/1‑140 (MQ=255)
ccaGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAgg > 1:134657/1‑140 (MQ=255)
ccaGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAgg > 1:1002256/1‑140 (MQ=255)
ccaGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAgg > 2:2094128/1‑140 (MQ=255)
caGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGa > 1:901721/1‑140 (MQ=255)
aGCGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGAc < 1:316446/140‑1 (MQ=255)
cGAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCa < 1:1029517/140‑1 (MQ=255)
gAAAGTAACACCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCAc < 2:1723693/140‑1 (MQ=255)
cacCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCgg > 1:283947/1‑140 (MQ=255)
acCATCCATAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGt > 1:1143112/1‑140 (MQ=255)
ccatccatAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGtt < 1:325542/140‑1 (MQ=255)
catccatAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTc < 1:793679/140‑1 (MQ=255)
atccatAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTcc < 1:1881998/140‑1 (MQ=255)
tccatAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCg > 1:925250/1‑140 (MQ=255)
ccatAACGTGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCgt > 1:63567/1‑140 (MQ=255)
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CGATGCTCCACTCCTGCCCTTGCCAACGCAAACGCCCGTCCATCAACAAGCGAATTT‑CCCCCTGGCGAGCATTAATACGCCGCTGGCTGCGAACGCAATCAAACACCACCAGCGAAAGTAACACCATCCATAACGGGGTGTAACTGAGTGGCCAGGGCATGAGTAAAATAACAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGT > NC_000913/3040571‑3040837
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
