Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,219,701 |
G→T |
A70S (GCG→TCG) |
patA → |
putrescine aminotransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,219,701 | 0 | G | T | 98.9%
| 301.2
/ ‑3.1
| 92 | A70S (GCG→TCG) | patA | putrescine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (48/43); total (49/43) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.03e-01 |
GAACGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAAGCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAAACAACCGC > NC_000913/3219564‑3219839
|
gAACGTTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCAGGCGGGGATTACGGAGACGTAGAGTGGCAATCg < 1:766849/140‑1 (MQ=255)
aaCGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCgg > 2:1574391/1‑140 (MQ=255)
aaCGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCgg < 1:1574391/140‑1 (MQ=255)
aCGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTATCGCCGGCGGGGATTACGGAGCCGTAGAGTGGTAATCggg < 1:1403837/140‑1 (MQ=255)
aCGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCggg < 2:976865/140‑1 (MQ=255)
aCGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCggg < 2:68837/140‑1 (MQ=255)
aCGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCggg < 2:343523/140‑1 (MQ=255)
cGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGa > 1:508699/1‑140 (MQ=255)
gatGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAAAGAGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCggg < 2:750187/138‑1 (MQ=255)
aTCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTa > 1:1277838/1‑140 (MQ=255)
aTCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTa > 1:205994/1‑140 (MQ=255)
aTCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTa > 1:1775570/1‑140 (MQ=255)
tGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATa < 1:1764528/140‑1 (MQ=255)
agaTGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCtt > 2:1366270/1‑140 (MQ=255)
gaTGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCttt > 2:28203/1‑139 (MQ=255)
gaTGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCttt > 2:633186/1‑139 (MQ=255)
gaTGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTg > 1:482469/1‑140 (MQ=255)
aTGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGt > 1:1810012/1‑140 (MQ=255)
aTGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGt > 2:916279/1‑140 (MQ=255)
aTGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGt > 2:1779316/1‑140 (MQ=255)
aTGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGCAGAGTGGCAATCGGGAAGTTTAAATACGCTTGt > 2:776885/1‑140 (MQ=255)
tGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTc < 1:1017117/140‑1 (MQ=255)
aaaGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGa < 1:28203/140‑1 (MQ=255)
aaaGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGa < 2:1926142/140‑1 (MQ=255)
aCTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACAccc < 2:1347003/140‑1 (MQ=255)
aCTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGCGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATTCGCTTGTCGACAccc < 2:176678/140‑1 (MQ=255)
ttAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAg > 1:1950151/1‑140 (MQ=255)
ccGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCATTCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGcc < 1:1817465/140‑1 (MQ=255)
cGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCa > 1:1822655/1‑140 (MQ=255)
agagGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAgg < 2:1810012/140‑1 (MQ=255)
agagGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAgg < 2:1948459/140‑1 (MQ=255)
agGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACTGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCa > 2:1790306/1‑136 (MQ=255)
agGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCa < 1:1790306/136‑1 (MQ=255)
ggTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGt < 1:916279/140‑1 (MQ=255)
aTTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAgg < 2:992854/133‑1 (MQ=255)
aTTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAgg > 1:992854/1‑133 (MQ=255)
aTTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTAt > 1:732686/1‑140 (MQ=255)
aTTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTAt > 1:302750/1‑140 (MQ=255)
ttGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATc < 1:1096075/140‑1 (MQ=255)
tGAATACTTCAA‑‑AGAGCATGGCAGTCAGGGGTTTTTAGAGTATCGCAAATCTGTTTCCGCCGGCGTGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACTCTTGTCGACACCCAGGGCCAGGAGTTTATCg < 2:1751449/140‑1 (MQ=255)
gAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGa < 2:2069009/140‑1 (MQ=255)
gAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGa < 2:508699/140‑1 (MQ=255)
gAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGa < 2:1544746/140‑1 (MQ=255)
gAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGa < 2:1152600/140‑1 (MQ=255)
aaTACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGCAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGAc > 2:1540558/1‑140 (MQ=255)
cTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGcc > 1:1261726/1‑140 (MQ=255)
ttCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGTGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCt > 2:490917/1‑140 (MQ=255)
ttCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCt > 2:957257/1‑140 (MQ=255)
ttCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCt > 2:1372833/1‑140 (MQ=255)
cAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTgg > 2:2085484/1‑140 (MQ=255)
cAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTgg < 1:957257/140‑1 (MQ=255)
cAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCAAGGGCCAGGAGTTTATCGACTGCCTgg > 2:1693697/1‑140 (MQ=255)
aa‑‑aGAGCATGTCAATCAGGGGTTTTTAGAGTACCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTggg < 2:1138988/140‑1 (MQ=255)
agagCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAg > 2:1090361/1‑140 (MQ=255)
agagCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAg > 1:2107729/1‑140 (MQ=255)
cATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGttt > 2:2089393/1‑140 (MQ=255)
cATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGttt > 1:582856/1‑140 (MQ=255)
aTGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGtttt > 1:303387/1‑140 (MQ=255)
aTGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGtttt > 1:573089/1‑140 (MQ=255)
aTGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGtttt > 2:1948320/1‑140 (MQ=255)
tCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGa < 2:1540378/140‑1 (MQ=255)
tCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAAttt > 1:142581/1‑140 (MQ=255)
tCCGGGGTTGTTAGAGTATCGCAAATCTGTTACCGCCGTCGGGTAGTACTGCTCCATCGAGTGCCAATTTGGAGGTATAAATACGCTTTTCTTCACCCTAGCCCAGCCGTGTTTCGGGTTCTTGGGAGGGTTTTGAAttt > 2:2023776/1‑140 (MQ=255)
ggTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAAc > 1:930688/1‑140 (MQ=255)
tAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTgggg < 1:318973/140‑1 (MQ=255)
tAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTgggg < 2:271483/140‑1 (MQ=255)
gTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCAcc > 2:2135109/1‑140 (MQ=255)
tATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCg < 2:878378/140‑1 (MQ=255)
tATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGGGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATCTTCAACGTGGGGCACCg > 2:1563538/1‑140 (MQ=255)
aTCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGt > 2:785778/1‑140 (MQ=255)
cAAATCTGTTACCGCCGGCGGGGTTTACGAAGCTGTAGTGTTGCAATCGGGAAGTATAAACACAGGTATCGACACACAGGGTCCGGAGGTTATTGACTTCCTTGGATGCTTTGGAATTTTTAACGTGGGGCGCCTAAATc > 2:1433455/1‑140 (MQ=255)
cAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCAAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATc < 1:1693697/140‑1 (MQ=255)
cTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGtt < 2:1950151/140‑1 (MQ=255)
cTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGtt < 1:471213/140‑1 (MQ=255)
cTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGtt < 2:10437/140‑1 (MQ=255)
gTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTtgt > 2:589206/1‑140 (MQ=255)
gTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTtgt > 2:1365728/1‑140 (MQ=255)
ttACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTtgtg > 1:116919/1‑140 (MQ=255)
ttACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTtgtg > 1:306520/1‑140 (MQ=255)
cggcggGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTccg < 1:2135109/140‑1 (MQ=255)
cggcggGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTccg < 2:26624/140‑1 (MQ=255)
ggcggGGATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTccgc < 2:142581/140‑1 (MQ=255)
ggggATTACGGAGCCGTAGAGTGGCAATCGGGAAGTGTAAATACGCTTGACGACGCCCAGGGCCAGGAGTTTATCGGCTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGt < 2:3070/140‑1 (MQ=255)
gggATTACGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTa < 2:633085/140‑1 (MQ=255)
aCGGAGCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAAt < 2:302750/140‑1 (MQ=255)
gCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACt < 1:1728609/140‑1 (MQ=255)
gCCGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACt > 1:850344/1‑140 (MQ=255)
ccGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACtt > 1:761727/1‑140 (MQ=255)
cGTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCAGCCGTACAGAATCAACttt > 2:653262/1‑139 (MQ=255)
gTAGAGTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGc < 2:1261726/140‑1 (MQ=255)
gTAGAGTGGCAATCGGGAAGTTTAAATACGATTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGc < 1:1366270/140‑1 (MQ=255)
gTGGCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAaac < 1:1948320/140‑1 (MQ=255)
gTGGCAATCGGGAAGTTTAAATACGCTTGTAGACCCCCAGGGACAGGAGTTTATCGACTGCCTGGGAGGTTTTGGACTTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAaac < 1:2023776/140‑1 (MQ=255)
gCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAaacaac > 1:1589237/1‑140 (MQ=255)
gCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAaacaac > 1:142369/1‑140 (MQ=255)
gCAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAaacaac > 1:1963796/1‑140 (MQ=255)
cAATCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAAACAAcc < 2:1963796/140‑1 (MQ=255)
aGCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGCTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAAACAACCGc > 1:1990162/1‑140 (MQ=255)
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GAACGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAA‑‑AGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAAGCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAAACAACCGC > NC_000913/3219564‑3219839
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
