Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,904,749 |
C→A |
Q283H (CAG→CAT) |
bglF ← |
beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,904,749 | 0 | C | A | 100.0%
| 473.4
/ NA
| 137 | Q283H (CAG→CAT) | bglF | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (68/69); total (68/69) |
Only 100 of 143 total aligned reads displayed.
CAGCGGGATCATGGTGTCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGG > NC_000913/3904614‑3904883
|
cAGCGGGATCATGGTGTCGTAGCCCAGTACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGAt < 1:871437/140‑1 (MQ=255)
cAGCGGGATCATGGTGTCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGAt < 1:1875997/140‑1 (MQ=255)
cGGGATCATGGTGTCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCGAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGTAACCGCAGGATaaa > 1:2022068/1‑140 (MQ=255)
cGGGATCATGGTGTCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATaaa > 1:779708/1‑140 (MQ=255)
cGGGATCATGGTGTCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATaaa > 2:598398/1‑140 (MQ=255)
ggATCATGGTGTCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGc < 2:516717/140‑1 (MQ=255)
ggATCATGGTGTCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGc < 2:2011963/140‑1 (MQ=255)
tGGTGTCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAgaga > 2:1096544/1‑140 (MQ=255)
tCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAAcc > 2:1703018/1‑140 (MQ=255)
tCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAAcc > 2:964779/1‑140 (MQ=255)
tCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAAcc > 2:2036069/1‑140 (MQ=255)
cGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACcg < 1:189805/140‑1 (MQ=255)
cGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACcg < 2:2072956/140‑1 (MQ=255)
gTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACcgg > 2:158157/1‑140 (MQ=255)
tAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACcggc > 1:304502/1‑140 (MQ=255)
tAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGAGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACcggc > 1:1589639/1‑140 (MQ=255)
gCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACcggcgg > 1:1428307/1‑140 (MQ=255)
ccAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCa < 2:2039377/140‑1 (MQ=255)
gCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATc > 2:1160801/1‑140 (MQ=255)
cACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCa > 1:1641911/1‑140 (MQ=255)
cACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCa > 2:2070974/1‑140 (MQ=255)
aCGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGTCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAg < 1:128069/140‑1 (MQ=255)
tGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCa < 1:373432/131‑1 (MQ=255)
tGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCg < 1:672959/140‑1 (MQ=255)
tGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCg > 2:2110763/1‑140 (MQ=255)
tGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCg > 2:69830/1‑140 (MQ=255)
tGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCg < 1:206422/140‑1 (MQ=255)
tGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCg < 2:2073986/140‑1 (MQ=255)
tGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCg > 2:1683853/1‑140 (MQ=255)
gAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCAATACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGc < 1:165654/140‑1 (MQ=255)
tATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATc < 1:1766314/140‑1 (MQ=255)
ttGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCa > 2:1609468/1‑140 (MQ=255)
ttGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACAGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCa > 1:746599/1‑140 (MQ=255)
tACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGtt > 2:888764/1‑140 (MQ=255)
tACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGtt > 1:481623/1‑140 (MQ=255)
acacAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTg > 2:340547/1‑140 (MQ=255)
cacaGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGa > 1:1737804/1‑140 (MQ=255)
acaGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGAt > 1:36997/1‑140 (MQ=255)
acaGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGAt > 2:785196/1‑140 (MQ=255)
acaGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGAt > 1:2121308/1‑140 (MQ=255)
acaGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGAt > 1:2100713/1‑140 (MQ=255)
acaGCGGCACCAGGCCCCAGTGCAGTCCGAACATAACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGAt > 2:1535337/1‑140 (MQ=255)
aaGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATa < 2:382365/139‑1 (MQ=255)
aGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAg > 2:215774/1‑140 (MQ=255)
gCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTTGCTTATCCAGGTTGATAGc > 2:1434991/1‑140 (MQ=255)
gCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATc > 1:1426947/1‑128 (MQ=255)
gCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATc < 2:1426947/128‑1 (MQ=255)
gCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGc > 1:636706/1‑140 (MQ=255)
gCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGc > 1:1462363/1‑140 (MQ=255)
gCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGc > 2:1997208/1‑140 (MQ=255)
gCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGc > 2:437719/1‑140 (MQ=255)
gCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGc > 2:1470226/1‑140 (MQ=255)
cGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCg > 1:471299/1‑140 (MQ=255)
cGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCg > 1:1955464/1‑140 (MQ=255)
gCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGc < 2:1867090/140‑1 (MQ=255)
aCCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGccc < 2:2121308/140‑1 (MQ=255)
ccAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGcccc < 2:1428307/140‑1 (MQ=255)
aGGCCCCAGTGCAGTCCGAACATGCCGAAGAATTGCCACAAGCCGCCCACTACCTTGTCCGCAACTGCAGGAACCGAATTCTGTAACTACTGATATCCAGCTGCAATCAGTTCGCTTACCCACGTTGATATCTGCCccac < 2:2022068/140‑1 (MQ=255)
ggCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCccacc > 2:722215/1‑140 (MQ=255)
ccccAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACcag < 1:340547/140‑1 (MQ=255)
cccAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACcagc < 2:1737804/140‑1 (MQ=255)
aGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGa > 2:1278089/1‑140 (MQ=255)
aGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGa > 1:1764233/1‑140 (MQ=255)
aGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGa > 2:11208/1‑140 (MQ=255)
gTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGaa > 1:1684542/1‑140 (MQ=255)
aGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGt > 2:1955789/1‑140 (MQ=255)
aGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGt < 1:1160801/140‑1 (MQ=255)
aGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGt < 2:1489344/140‑1 (MQ=255)
tCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTg < 1:176733/139‑1 (MQ=255)
tCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGa > 2:1448138/1‑140 (MQ=255)
tCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGa < 1:1781648/140‑1 (MQ=255)
tCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGa < 1:722215/140‑1 (MQ=255)
agAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACg < 2:1641911/139‑1 (MQ=255)
gAACATGACGAAGATTTGCCAGAAGCCGGCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGGTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACgg < 1:1703018/140‑1 (MQ=255)
aCATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGgt < 2:1848420/140‑1 (MQ=255)
aCGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGAt < 1:1096544/140‑1 (MQ=255)
aCGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGAt < 2:1764233/140‑1 (MQ=255)
cGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATa < 1:849769/140‑1 (MQ=255)
gAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATaa < 1:437719/140‑1 (MQ=255)
gATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCa < 1:753582/140‑1 (MQ=255)
gATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCa < 1:2070974/140‑1 (MQ=255)
aTTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCCCCAGCAGAAAGGTGACGTGTGTGATAACCAt < 2:1766910/140‑1 (MQ=255)
aTTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCAt < 1:764721/140‑1 (MQ=255)
aTTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCAt < 1:1470226/140‑1 (MQ=255)
tttGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATc < 1:2012215/140‑1 (MQ=255)
ttGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCa < 2:2024822/140‑1 (MQ=255)
gCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGATATAACCGGCTGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGa < 1:1522274/140‑1 (MQ=255)
cAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACa < 2:36997/140‑1 (MQ=255)
cAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACa < 2:1224602/140‑1 (MQ=255)
ccgccCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCaa < 1:1448138/140‑1 (MQ=255)
gccCATTACCGCGCCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATg > 1:1164102/1‑140 (MQ=255)
cgcCCGCAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGaaa > 2:1574800/1‑140 (MQ=255)
cAAATGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAtttttt > 2:313292/1‑139 (MQ=255)
aaTGCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGAt < 2:481623/140‑1 (MQ=255)
gCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGc < 2:560326/140‑1 (MQ=255)
gCAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGc < 1:2150409/140‑1 (MQ=255)
cAGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGcc < 2:779708/140‑1 (MQ=255)
aGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCg > 2:611300/1‑140 (MQ=255)
aGGAACCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCg > 1:1287871/1‑140 (MQ=255)
aCCGCATGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACgg < 2:2132145/140‑1 (MQ=255)
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CAGCGGGATCATGGTGTCGTAGCCCAGCACGGTGAAGTTATTGATACACAGCGGCACCAGGCCCCAGTGCAGTCCGAACATGACGAAGATTTGCCAGAAGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGG > NC_000913/3904614‑3904883
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
