Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,320,740	G→T	L170I (CTC→ATC)	phnH ←	carbon‑phosphorus lyase core complex subunit PhnH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,320,740	0	G	T	100.0%	386.7 / NA	113	L170I (CTC→ATC)	phnH	carbon‑phosphorus lyase core complex subunit PhnH
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (63/50); total (63/50)

Only 100 of 116 total aligned reads displayed.

TCTCTTGCAGGGCGTGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAA  >  NC_000913/4320603‑4320875

tctctTGCAGGGCGTGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCg                                                                                                                                       <  1:1448953/140‑1 (MQ=255)

         gggCGTGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGAt                                                                                                                              >  2:1558164/1‑140 (MQ=255)

          ggCGTGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATg                                                                                                                             >  2:504459/1‑140 (MQ=255)

            cGTGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCg                                                                                                                           >  1:1389932/1‑140 (MQ=255)

            cGTGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCg                                                                                                                           >  1:1207600/1‑140 (MQ=255)

            cGTGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCg                                                                                                                           >  1:1045971/1‑140 (MQ=255)

            cGTGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCg                                                                                                                           >  1:790543/1‑140 (MQ=255)

              tGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCggg                                                                                                                         >  2:908937/1‑140 (MQ=255)

              tGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCggg                                                                                                                         <  2:1577849/140‑1 (MQ=255)

              tGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCggg                                                                                                                         >  2:542734/1‑140 (MQ=255)

              tGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCggg                                                                                                                         >  2:1192150/1‑140 (MQ=255)

                ggcggcGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGgcg                                                                                                                       <  2:2129558/140‑1 (MQ=255)

                 gcggcgTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCAACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGgcgc                                                                                                                      <  1:192349/140‑1 (MQ=255)

                    gcgTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCg                                                                                                                   >  1:1115013/1‑140 (MQ=255)

                    gcgTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCg                                                                                                                   >  2:1329374/1‑140 (MQ=255)

                     cgTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGgcg                                                                                                                       <  1:1122790/135‑1 (MQ=255)

                     cgTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGgcg                                                                                                                       >  2:1122790/1‑135 (MQ=255)

                     cgTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCgg                                                                                                                  >  1:904171/1‑140 (MQ=255)

                     cgTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCgg                                                                                                                  >  2:2073457/1‑140 (MQ=255)

                       tCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTg                                                                                                                <  1:1685908/140‑1 (MQ=255)

                       tCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTg                                                                                                                <  2:2072226/140‑1 (MQ=255)

                            cGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTc                                                                                                           <  1:1676069/140‑1 (MQ=255)

                                ttCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGc                                                                                                       <  1:664145/140‑1 (MQ=255)

                                 tctcGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCa                                                                                                      <  2:1517341/140‑1 (MQ=255)

                                     gCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAAt                                                                                                  >  1:662327/1‑140 (MQ=255)

                                         ccTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCAc                                                                                              >  2:1230323/1‑140 (MQ=255)

                                            ttCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTcc                                                                                           >  1:1351887/1‑140 (MQ=255)

                                            ttCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTcc                                                                                           <  2:1489824/140‑1 (MQ=255)

                                            ttCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTcc                                                                                           >  1:251284/1‑140 (MQ=255)

                                              cACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCgg                                                                                         <  1:1329374/140‑1 (MQ=255)

                                                 ggCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAg                                                                                      >  1:1699330/1‑140 (MQ=255)

                                                   cAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCt                                                                                    >  1:1720984/1‑140 (MQ=255)

                                                   cAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCt                                                                                    >  2:2050680/1‑140 (MQ=255)

                                                    aaCGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTg                                                                                   >  2:1023914/1‑140 (MQ=255)

                                                     aCGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGc                                                                                  >  1:1019154/1‑140 (MQ=255)

                                                     aCGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGc                                                                                  >  1:1505110/1‑140 (MQ=255)

                                                      cGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCg                                                                                 >  1:205323/1‑140 (MQ=255)

                                                      cGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCg                                                                                 >  1:1097180/1‑140 (MQ=255)

                                                      cGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCg                                                                                 >  2:396623/1‑140 (MQ=255)

                                                      cGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCg                                                                                 <  1:1230323/140‑1 (MQ=255)

                                                       gTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCgg                                                                                <  1:504459/140‑1 (MQ=255)

                                                         aCATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAg                                                                              <  1:1231599/140‑1 (MQ=255)

                                                           aTCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCg                                                                            <  1:2050680/140‑1 (MQ=255)

                                                                 acacCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCAtt                                                                      >  1:940785/1‑140 (MQ=255)

                                                                  cacCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTc                                                                     >  1:1093440/1‑140 (MQ=255)

                                                                  cacCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTc                                                                     >  2:1765535/1‑140 (MQ=255)

                                                                  cacCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTc                                                                     >  1:2127184/1‑140 (MQ=255)

                                                                   acCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCg                                                                    <  2:1045971/140‑1 (MQ=255)

                                                                     cTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGtt                                                                  >  2:48251/1‑140 (MQ=255)

                                                                     cTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGtt                                                                  >  1:1702370/1‑140 (MQ=255)

                                                                     cTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGtt                                                                  >  1:1940058/1‑140 (MQ=255)

                                                                     cTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGGCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGtt                                                                  >  1:1671362/1‑140 (MQ=255)

                                                                       ccACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGttct                                                                >  1:1033664/1‑140 (MQ=255)

                                                                       ccACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGttct                                                                >  1:1025799/1‑140 (MQ=255)

                                                                        cacaTGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGttctt                                                               <  2:1671362/140‑1 (MQ=255)

                                                                          caTGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCg                                                             >  2:1017959/1‑140 (MQ=255)

                                                                             gAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCa                                                          <  1:1471374/140‑1 (MQ=255)

                                                                             gAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCa                                                          <  1:542734/140‑1 (MQ=255)

                                                                             gAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCa                                                          <  2:1720984/140‑1 (MQ=255)

                                                                               gTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCa                                                          <  1:101605/138‑1 (MQ=255)

                                                                               gTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCa                                                          >  2:101605/1‑138 (MQ=255)

                                                                               gTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAAt                                                        >  2:432368/1‑140 (MQ=255)

                                                                                  gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCCCTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAcc                                                     <  1:1075620/140‑1 (MQ=255)

                                                                                  gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAcc                                                     <  2:1093440/140‑1 (MQ=255)

                                                                                  gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAcc                                                     <  2:271900/140‑1 (MQ=255)

                                                                                  gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAcc                                                     >  1:1346341/1‑140 (MQ=255)

                                                                                  gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAcc                                                     <  1:1192150/140‑1 (MQ=255)

                                                                                  gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAcc                                                     >  1:325927/1‑140 (MQ=255)

                                                                                  gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAcc                                                     <  2:1033664/140‑1 (MQ=255)

                                                                                  gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAcc                                                     <  1:1004370/140‑1 (MQ=255)

                                                                                  gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAcc                                                     <  2:1207600/140‑1 (MQ=255)

                                                                                       cgGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCAc                                                >  1:1119780/1‑140 (MQ=255)

                                                                                       cgGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCAc                                                >  1:189591/1‑140 (MQ=255)

                                                                                       cgGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCAGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCAc                                                >  1:663927/1‑140 (MQ=255)

                                                                                               ccAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTGAgg                                        <  1:388661/140‑1 (MQ=255)

                                                                                               ccAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAgg                                        <  2:1351887/140‑1 (MQ=255)

                                                                                               ccAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAgg                                        <  1:396623/140‑1 (MQ=255)

                                                                                                 agcagGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGgcg                                      <  2:940785/140‑1 (MQ=255)

                                                                                                    agGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCaa                                   >  2:1109285/1‑140 (MQ=255)

                                                                                                      gcgcTCGCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACa                                 <  2:2107543/140‑1 (MQ=255)

                                                                                                            gCCACAGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCAGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTc                           <  2:663927/140‑1 (MQ=255)

                                                                                                            accACGGTTCAGGAAAAGGTCGATGCCGAGCGGGAACGGATGAGGACGCACGGTGAGTTCGTACAGAATGCTCTCCGGCAGCTGCGGAGCAATCATACGTTCTTCGGCAATACCAGCAGCAGTAAGGCGCAACATGCGtg                           <  2:797243/139‑2 (MQ=255)

                                                                                                                 aGGTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTccgccc                      >  2:1168053/1‑139 (MQ=255)

                                                                                                                   gTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTccg                         <  2:906816/135‑1 (MQ=255)

                                                                                                                   gTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTccg                         >  1:906816/1‑135 (MQ=255)

                                                                                                                   gTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCt                    <  2:189591/140‑1 (MQ=255)

                                                                                                                   gTCAGGATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCt                    <  2:1870366/140‑1 (MQ=255)

                                                                                                                        gATCAGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGc               >  1:1809593/1‑140 (MQ=255)

                                                                                                                            aGGTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGc           <  2:904171/140‑1 (MQ=255)

                                                                                                                             ggacGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCg          >  1:1240517/4‑140 (MQ=255)

                                                                                                                             ggTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGATCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCg          >  2:1889607/1‑140 (MQ=255)

                                                                                                                             ggTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCg          >  1:1043222/1‑140 (MQ=255)

                                                                                                                             ggTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCg          >  2:1818722/1‑140 (MQ=255)

                                                                                                                             ggTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCg          >  1:954796/1‑140 (MQ=255)

                                                                                                                             ggTCGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCg          >  2:955010/1‑140 (MQ=255)

                                                                                                                              gTCGATGCCATTAGGGAGCGGATGCGGGCGATTGGTGAGTTCGTGAAGAATGCGATCGGGCAGCTGCGGGGCGATCTTTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGa         <  2:251284/140‑1 (MQ=255)

                                                                                                                                cGATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGAcc       <  1:993555/140‑1 (MQ=255)

                                                                                                                                 gATGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCt      <  2:1043222/140‑1 (MQ=255)

                                                                                                                                  aTGCCGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTg     >  1:330460/1‑140 (MQ=255)

                                                                                                                                     ccGATCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTaa  <  1:2073457/140‑1 (MQ=255)

TCTCTTGCAGGGCGTGGGCGGCGTCGATCGCCTTCTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAA  >  NC_000913/4320603‑4320875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A