Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F48 I1 R1
|
61 |
131.2 |
4447032 |
99.1% |
4407008 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,353,248 |
G→T |
P268Q (CCG→CAG) |
yhcC ← |
radical SAM family oxidoreductase YhcC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,353,248 | 0 | G | T | 100.0%
| 537.9
/ NA
| 149 | P268Q (CCG→CAG) | yhcC | radical SAM family oxidoreductase YhcC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (69/80); total (69/80) |
Only 100 of 151 total aligned reads displayed.
CCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCTTTCGCCATAATG > NC_000913/3353111‑3353385
|
ccTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCtgg > 1:832861/1‑140 (MQ=255)
ccTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGgcg > 1:245154/1‑140 (MQ=255)
ccTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGgcg < 2:1485418/140‑1 (MQ=255)
cTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGgcgc < 1:2098076/140‑1 (MQ=255)
cTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTgg < 1:206368/140‑1 (MQ=255)
ttGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGaa > 2:1141166/1‑140 (MQ=255)
tGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGaaa > 2:91691/1‑140 (MQ=255)
tGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGaaa > 1:1879824/1‑140 (MQ=255)
gAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATg < 1:1565839/140‑1 (MQ=255)
gAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATg < 2:1777353/140‑1 (MQ=255)
gAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATg < 2:832861/140‑1 (MQ=255)
aGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGc < 1:1299915/140‑1 (MQ=255)
aGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGc < 2:419674/140‑1 (MQ=255)
ggTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCg > 1:1932803/1‑140 (MQ=255)
aGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCggtg > 1:319694/1‑140 (MQ=255)
gCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCggtgg < 2:259413/140‑1 (MQ=255)
ccACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCggtggt > 2:1532957/1‑140 (MQ=255)
ccACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCggtgg > 2:1592939/1‑139 (MQ=255)
ccACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCggtgg < 1:1592939/139‑1 (MQ=255)
ccACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGACAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCggtggt > 2:1659113/1‑140 (MQ=255)
ggACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAt < 1:1012680/140‑1 (MQ=255)
gACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATc < 1:1125174/140‑1 (MQ=255)
cccAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTc > 1:1346187/1‑140 (MQ=255)
cAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCg < 2:1879824/140‑1 (MQ=255)
cAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCg < 1:2166515/140‑1 (MQ=255)
cAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCg < 1:1757553/140‑1 (MQ=255)
aTCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTa > 2:2020375/1‑140 (MQ=255)
aTCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTa > 2:384689/1‑140 (MQ=255)
ccTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATgg < 1:375879/140‑1 (MQ=255)
tGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCg > 1:1012055/1‑140 (MQ=255)
gTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGa < 1:449348/140‑1 (MQ=255)
cATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCAtt > 2:386351/1‑140 (MQ=255)
cATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCAtt > 1:2108502/1‑140 (MQ=255)
tGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCAtttt > 2:1701424/1‑139 (MQ=255)
tGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTtc > 1:322297/1‑140 (MQ=255)
tGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTtc > 1:1661190/1‑140 (MQ=255)
gTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTtct > 2:627746/1‑140 (MQ=255)
gTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTtct > 2:1948807/1‑140 (MQ=255)
tcattcaGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTcc < 2:1323951/140‑1 (MQ=255)
cattcaGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCg > 2:2096162/1‑140 (MQ=255)
attcaGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCgg < 2:223156/140‑1 (MQ=255)
acaGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa < 1:1659113/138‑1 (MQ=255)
aTAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa < 2:1554331/140‑1 (MQ=255)
aTAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa > 2:708064/1‑140 (MQ=255)
aTAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa > 2:656468/1‑140 (MQ=255)
aTAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa > 1:588364/1‑140 (MQ=255)
aTAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa > 2:342061/1‑140 (MQ=255)
aGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGc < 1:91691/140‑1 (MQ=255)
gCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCg < 1:1701424/140‑1 (MQ=255)
cGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGTGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCgt > 2:1365095/1‑140 (MQ=255)
cGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCgt > 1:1904905/1‑140 (MQ=255)
ccAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTaa < 2:1346187/140‑1 (MQ=255)
aGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtc > 2:2197195/1‑140 (MQ=255)
gCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcc > 2:24131/1‑140 (MQ=255)
cTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcct > 1:873103/1‑140 (MQ=255)
cTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcct > 2:2150240/1‑140 (MQ=255)
cTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcct > 1:1123290/1‑140 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 1:2020375/140‑1 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 2:1904691/140‑1 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 1:223562/140‑1 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 2:690155/140‑1 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 2:1590977/140‑1 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 1:492677/140‑1 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 2:247862/140‑1 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 1:1141166/140‑1 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 1:600705/140‑1 (MQ=255)
tCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 2:588364/140‑1 (MQ=255)
cGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctcc > 2:91136/1‑140 (MQ=255)
gACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCa > 2:23439/1‑140 (MQ=255)
aCCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAg > 1:301232/1‑140 (MQ=255)
ccATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc > 1:1517236/1‑136 (MQ=255)
ccATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 2:1517236/136‑1 (MQ=255)
ccATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtcctc < 1:1967997/136‑1 (MQ=255)
ccATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGt > 2:988442/1‑140 (MQ=255)
ccATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGt > 1:1879427/1‑140 (MQ=255)
cATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGtt < 1:384689/140‑1 (MQ=255)
tCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGTGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCaa < 1:1365095/140‑1 (MQ=255)
tCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCaa < 2:215329/140‑1 (MQ=255)
tCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCaa < 1:2134388/140‑1 (MQ=255)
cGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATAc < 1:2096162/140‑1 (MQ=255)
ccATCGATTTTCGCACCACAGCGGAGCTAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGt > 1:2062615/1‑140 (MQ=255)
ccATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGt > 2:1671435/1‑140 (MQ=255)
cGATTTTCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCaa > 2:504919/1‑140 (MQ=255)
ttttCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACg < 2:1995344/140‑1 (MQ=255)
ttttCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACg < 2:2099008/140‑1 (MQ=255)
tCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGccc < 1:656468/140‑1 (MQ=255)
tCGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGccc < 1:2197195/140‑1 (MQ=255)
cGCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGcccc < 1:983393/140‑1 (MQ=255)
gCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCg < 2:322297/140‑1 (MQ=255)
gCACCACAGCGGAGCAAGCAGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCg < 1:767616/140‑1 (MQ=255)
gcaagcaGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCttt < 1:94455/140‑1 (MQ=255)
gcaagcaGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCttt < 2:571722/140‑1 (MQ=255)
gcaagcaGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCttt < 2:873103/140‑1 (MQ=255)
agcagcagcGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCttt < 2:1414578/137‑1 (MQ=255)
caagcaGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCTTTc > 2:1432393/1‑140 (MQ=255)
caagcaGCGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCTTTc > 2:1961517/1‑140 (MQ=255)
gcagcGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGATGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCTTTCGcc > 1:152994/1‑140 (MQ=255)
cagcGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCTTTCGCCa < 1:91136/140‑1 (MQ=255)
cagcGTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCTTTCGCCa < 1:276847/140‑1 (MQ=255)
gTCTGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTT‑CCAGGCTTTCGCCATAAtg < 2:1272997/140‑1 (MQ=255)
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CCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATCCTCCAGTTCAATACCGTTCAAACGCCCCGCTTCCCAGGCTTTCGCCATAATG > NC_000913/3353111‑3353385
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
