Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F48 I1 R1
|
55 |
131.7 |
4456318 |
99.2% |
4420667 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,247,284 |
G→T |
K211N (AAG→AAT) |
exuR → |
DNA‑binding transcriptional repressor ExuR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,247,284 | 0 | G | T | 99.1%
| 393.0
/ ‑6.2
| 110 | K211N (AAG→AAT) | exuR | DNA‑binding transcriptional repressor ExuR |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (53/56); minor base A (0/1); total (53/57) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 112 total aligned reads displayed.
GTGGACCCAGCGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAAGCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGC > NC_000913/3247149‑3247419
|
gtgGACCCAGCGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTgg < 1:1777612/140‑1 (MQ=255)
gtgGACCCAGCGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTgg < 2:188468/140‑1 (MQ=255)
gACCCAGCGTAGCCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCaa > 2:1461536/1‑140 (MQ=255)
aGCGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGAC‑‑CGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGgca < 1:657097/140‑1 (MQ=255)
gCGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGgc < 2:386198/140‑1 (MQ=255)
gCGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAAACTGGCAATGTGgc < 2:483327/140‑1 (MQ=255)
cGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGgca > 2:1449814/1‑140 (MQ=255)
aGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGgcagca > 1:1889661/1‑140 (MQ=255)
gTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCAt < 2:351012/140‑1 (MQ=255)
tAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTgg > 2:849197/1‑140 (MQ=255)
aaCCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGa < 1:576979/140‑1 (MQ=255)
aCCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGaa < 2:1122504/140‑1 (MQ=255)
aCCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGaa < 2:1699655/140‑1 (MQ=255)
aCCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGaa < 1:1461536/140‑1 (MQ=255)
aCCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGaa < 1:1301187/140‑1 (MQ=255)
aCCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGaa > 2:864632/1‑140 (MQ=255)
aCCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGaa < 2:911101/140‑1 (MQ=255)
accGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGaaa < 2:913891/139‑1 (MQ=255)
tACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGTTAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAacac > 1:485035/1‑140 (MQ=255)
tACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAacac < 2:806811/140‑1 (MQ=255)
tACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAacac > 1:484894/1‑140 (MQ=255)
tACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAacac > 1:296795/1‑140 (MQ=255)
tACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAacac < 2:326933/140‑1 (MQ=255)
tACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGAAATGTGGCAGCATCTGGAAAacac < 2:913239/140‑1 (MQ=255)
aCTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGCAAACAcc < 1:1449814/140‑1 (MQ=255)
aCTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACAcc < 1:2218453/140‑1 (MQ=255)
aCTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACAcc < 1:2220587/140‑1 (MQ=255)
cTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCa < 2:2164636/140‑1 (MQ=255)
ggAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAg > 2:1891048/1‑140 (MQ=255)
gAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGTTAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGa < 2:485035/140‑1 (MQ=255)
gAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATATGGCAATGTGGCAGCATCTGGAAAACACCAAGa < 2:713316/140‑1 (MQ=255)
aaaaaCTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGaa < 2:321139/128‑1 (MQ=255)
aaaaaCTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGaa > 1:321139/1‑128 (MQ=255)
aaCTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATg < 2:571383/140‑1 (MQ=255)
tGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCa > 1:104540/1‑140 (MQ=255)
tCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGcga > 2:723521/1‑140 (MQ=255)
gTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCgacgac > 2:2110503/1‑140 (MQ=255)
aCCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACtt > 1:2077451/1‑140 (MQ=255)
acGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTc < 2:296795/139‑1 (MQ=255)
cGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCg > 1:597129/1‑140 (MQ=255)
tCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGTTCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGTAACCAGCGACGACTTCGAg > 2:1871577/1‑140 (MQ=255)
tCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAg > 1:1706601/1‑140 (MQ=255)
tCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAg > 1:315924/1‑140 (MQ=255)
tCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAg > 1:2080208/1‑140 (MQ=255)
tCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAg > 2:1368044/1‑140 (MQ=255)
gATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGtt > 2:1702869/1‑140 (MQ=255)
tGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGc < 1:1368044/140‑1 (MQ=255)
ggTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGcc < 2:2149628/140‑1 (MQ=255)
gtgtGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCg > 2:50289/1‑140 (MQ=255)
gtgtGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCg > 2:1235677/1‑140 (MQ=255)
gtgtGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCg > 1:1871557/1‑140 (MQ=255)
gtgtGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCg < 1:981349/140‑1 (MQ=255)
tgtgATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGa < 2:1871557/140‑1 (MQ=255)
tgtgATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGa < 2:315924/140‑1 (MQ=255)
gtgATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGAc > 2:1328627/1‑140 (MQ=255)
gtgATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGAc < 1:98636/140‑1 (MQ=255)
gtgATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGAc < 2:403454/140‑1 (MQ=255)
tgatgaCCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGcc > 2:1584676/1‑136 (MQ=255)
tgatgaCCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGcc < 1:1584676/136‑1 (MQ=255)
gatgaCCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCg > 2:344224/1‑140 (MQ=255)
atgaTCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGc > 2:1560603/1‑140 (MQ=255)
aCCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGctat > 2:1670812/1‑140 (MQ=255)
cACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGctatct > 1:963722/1‑140 (MQ=255)
aCGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGctatcta > 1:243286/1‑140 (MQ=255)
agATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGctatctat < 2:952190/139‑1 (MQ=255)
gATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTAtt > 1:1041073/1‑140 (MQ=255)
gATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTAtt < 2:597129/140‑1 (MQ=255)
aaaTCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGcc < 1:1514266/140‑1 (MQ=255)
aaTCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCg > 2:2076807/1‑140 (MQ=255)
aaTCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCg > 2:1824326/1‑140 (MQ=255)
tCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAAc < 1:849197/140‑1 (MQ=255)
cAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAAcc < 1:1702869/140‑1 (MQ=255)
cAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAAcc < 1:1235677/140‑1 (MQ=255)
aaGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAAccc > 1:876723/1‑140 (MQ=255)
aaGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAAccc > 2:1114206/1‑140 (MQ=255)
aGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGaaaa < 2:510658/136‑1 (MQ=255)
aGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGaaaa > 1:510658/1‑136 (MQ=255)
aGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCg < 1:1670812/140‑1 (MQ=255)
aGGCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCg < 1:984524/140‑1 (MQ=255)
ggCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCgg > 2:2175080/1‑140 (MQ=255)
ggCGCTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCgg > 2:1846868/1‑140 (MQ=255)
cgcTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCggtg > 1:1189125/1‑140 (MQ=255)
gcTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCggtgg < 2:963722/140‑1 (MQ=255)
gcTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCggtgg > 2:109727/1‑140 (MQ=255)
gcTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCggtgg < 2:556884/140‑1 (MQ=255)
cTGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCggtggt > 1:1053591/1‑140 (MQ=255)
tGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGgtggtg < 1:864632/140‑1 (MQ=255)
tGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGgtggtg < 2:2077451/140‑1 (MQ=255)
tGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGgtggtg < 1:2032477/140‑1 (MQ=255)
tGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGgtggtg < 1:2110503/140‑1 (MQ=255)
tGATTCGCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGgtggtg < 2:243286/140‑1 (MQ=255)
tGATACGCAAAGATACTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTAGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGgtggtg < 2:1099979/140‑1 (MQ=255)
gCAAAGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCAtctc < 2:2157490/140‑1 (MQ=255)
aGATCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATa < 1:2076807/140‑1 (MQ=255)
aTCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACa > 1:1176086/1‑140 (MQ=255)
aTCCTCATGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACa > 1:1128958/1‑140 (MQ=255)
aTGCTGCTAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGccacc > 1:270381/1‑140 (MQ=255)
ctgctAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGc > 1:1982721/1‑140 (MQ=255)
ctAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGc < 2:104540/140‑1 (MQ=255)
ctAATCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGc > 2:135585/1‑140 (MQ=255)
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GTGGACCCAGCGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAAGCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGC > NC_000913/3247149‑3247419
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
