Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A18 F48 I1 R1 70 76.3 2572620 98.7% 2539175 139.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,606,940 C→A L164M (CTG→ATG)  zntA → Zn(2(+))/Cd(2(+))/Pb(2(+)) exporting P‑type ATPase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,606,9400CA100.0% 246.3 / NA 69L164M (CTG→ATG) zntAZn(2(+))/Cd(2(+))/Pb(2(+)) exporting P‑type ATPase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (35/34);  total (35/34)

AAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCGATGGTGTTGCTG  >  NC_000913/3606803‑3607074
                                                                                                                                         |                                                                                                                                      
aagaaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATg                                                                                                                                      <  2:1026138/140‑1 (MQ=255)
        cAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGAt                                                                                                                              >  2:1041904/1‑140 (MQ=255)
          aGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTg                                                                                                                            <  2:52302/140‑1 (MQ=255)
             aTCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTc                                                                                                                         >  2:446642/1‑140 (MQ=255)
                aCGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTc                                                                                                                      <  1:534848/140‑1 (MQ=255)
                       aaaGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCAtt                                                                                                               >  2:994003/1‑140 (MQ=255)
                        aaGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTa                                                                                                              <  2:23525/140‑1 (MQ=255)
                           agaATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACgg                                                                                                           >  2:632428/1‑140 (MQ=255)
                              aTCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCTTTACGGTTg                                                                                                        >  1:1182046/1‑140 (MQ=255)
                               tCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGa                                                                                                       <  1:446642/140‑1 (MQ=255)
                                       tGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATcc                                                                                               <  1:1089130/140‑1 (MQ=255)
                                        gATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCg                                                                                              >  1:893785/1‑140 (MQ=255)
                                                  aTCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGTCCACGCTGGTTGGGATGTTCCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACtt                                                                                    <  1:638242/140‑1 (MQ=255)
                                                  aTCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACtt                                                                                    >  1:1086911/1‑140 (MQ=255)
                                                  aTCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACtt                                                                                    >  1:768068/1‑140 (MQ=255)
                                                   tCGTGATGATGGCAATCAGCTGGGGTCTTGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTc                                                                                   >  1:918167/1‑140 (MQ=255)
                                                   tCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTc                                                                                   >  1:1120855/1‑140 (MQ=255)
                                                   tCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTc                                                                                   >  2:615950/1‑140 (MQ=255)
                                                   tCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTc                                                                                   >  2:273112/1‑140 (MQ=255)
                                                    cGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCg                                                                                  <  1:831769/140‑1 (MQ=255)
                                                        atgatgGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCAt                                                                              >  2:702234/1‑140 (MQ=255)
                                                          gatgGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTg                                                                            <  2:1120855/140‑1 (MQ=255)
                                                          gatgGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATATACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTg                                                                            <  1:1041904/140‑1 (MQ=255)
                                                            tgGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGaa                                                                          >  2:981049/1‑140 (MQ=255)
                                                            tgGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGaa                                                                          >  2:767323/1‑140 (MQ=255)
                                                            tgGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGaa                                                                          >  1:145213/1‑140 (MQ=255)
                                                             ggCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGaaa                                                                         <  1:337097/140‑1 (MQ=255)
                                                             ggCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGaaa                                                                         <  1:969803/140‑1 (MQ=255)
                                                              gCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAAc                                                                        >  1:609660/1‑140 (MQ=255)
                                                              gCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAAc                                                                        >  1:738650/1‑140 (MQ=255)
                                                                           gTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTa                                                           <  2:768068/140‑1 (MQ=255)
                                                                           gTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTa                                                           >  1:822905/1‑140 (MQ=255)
                                                                            tCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAg                                                          <  2:312116/140‑1 (MQ=255)
                                                                             cTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGc                                                         <  2:1086911/140‑1 (MQ=255)
                                                                              tGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGcc                                                        >  2:400768/1‑140 (MQ=255)
                                                                              tGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGcc                                                        >  1:145335/1‑140 (MQ=255)
                                                                                gtgCAGTTCATTCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACTGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGc                                                      >  2:65255/3‑140 (MQ=255)
                                                                                gAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGc                                                      >  2:314619/1‑140 (MQ=255)
                                                                                gAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGc                                                      <  2:176813/140‑1 (MQ=255)
                                                                                     gTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTAttt                                                 >  2:1175329/1‑139 (MQ=255)
                                                                                     gTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTg                                                 <  2:145213/140‑1 (MQ=255)
                                                                                     gTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTg                                                 >  1:456891/1‑140 (MQ=255)
                                                                                        cAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCGGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTg                                              <  2:885074/140‑1 (MQ=255)
                                                                                        cAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTg                                              <  2:145335/140‑1 (MQ=255)
                                                                                        cAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTg                                              <  1:273112/140‑1 (MQ=255)
                                                                                        cAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTg                                              <  1:885911/140‑1 (MQ=255)
                                                                                        cAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTg                                              >  1:622485/1‑140 (MQ=255)
                                                                                         aaTCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGc                                             <  1:632428/140‑1 (MQ=255)
                                                                                          atcatcCGTTCGGGCAACTGGCGTTTATCGCGACCGCGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCa                                            <  1:174366/140‑1 (MQ=255)
                                                                                          atcatcCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCa                                            <  1:994003/140‑1 (MQ=255)
                                                                                          atcatcCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCa                                            <  2:918167/140‑1 (MQ=255)
                                                                                                cGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGttt                                      >  2:629995/1‑140 (MQ=255)
                                                                                                  ttCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTAt                                    >  2:651037/1‑140 (MQ=255)
                                                                                                    cGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTg                                  >  1:1207679/1‑140 (MQ=255)
                                                                                                        cAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGgcgc                              >  1:1036932/1‑140 (MQ=255)
                                                                                                        cAACTGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGgcgc                              <  1:1175329/140‑1 (MQ=255)
                                                                                                            tGGCGTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACg                          >  1:204472/1‑140 (MQ=255)
                                                                                                                gTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTg                      >  1:434020/1‑140 (MQ=255)
                                                                                                                gTTTATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTg                      <  2:1268870/140‑1 (MQ=255)
                                                                                                                   tATCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAg                   <  2:822905/140‑1 (MQ=255)
                                                                                                                    aTCGCGACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGc                  <  2:1036932/140‑1 (MQ=255)
                                                                                                                       gcgACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGc               <  1:722449/140‑1 (MQ=255)
                                                                                                                        cgACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCg              >  1:516587/1‑140 (MQ=255)
                                                                                                                        cgACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCg              >  1:1195687/1‑140 (MQ=255)
                                                                                                                        cgACCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCg              >  1:926406/1‑140 (MQ=255)
                                                                                                                          aCCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCGAt            <  1:809865/140‑1 (MQ=255)
                                                                                                                          aCCACGCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCGAt            >  1:60635/1‑140 (MQ=255)
                                                                                                                               gCTGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCGATGgtgt       <  2:926406/140‑1 (MQ=255)
                                                                                                                                 tGGTTGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCGATGGTGTtg     <  1:699098/140‑1 (MQ=255)
                                                                                                                                    ttGGGATGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCGATGGTGTtgctg  <  1:767323/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                      
AAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCGATGGTGTTGCTG  >  NC_000913/3606803‑3607074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A