Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F48 I1 R1	61	74.3	2613450	99.1%	2589928	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,153,929	C→A	L123M (CTG→ATG)	yghB →	DedA family protein YghB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,153,929	0	C	A	96.4%	187.0 / ‑2.6	56	L123M (CTG→ATG)	yghB	DedA family protein YghB
Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (40/14); total (41/15)
Fisher's exact test for biased strand distribution p-value = 4.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGC  >  NC_000913/3153796‑3154060

agcaAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTgg                                                                                                                               <  1:1234186/140‑1 (MQ=255)

          ggCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTgctggc                                                                                                                     >  1:32970/1‑140 (MQ=255)

               ctgGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGAc                                                                                                                >  1:1279662/1‑140 (MQ=255)

               ctgGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGAc                                                                                                                >  1:317666/1‑140 (MQ=255)

                         tataTTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGc                                                                                                      >  2:1091792/1‑140 (MQ=255)

                            atTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCAtt                                                                                                   >  1:595247/1‑140 (MQ=255)

                                aGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCAttgtcc                                                                                               >  2:1121894/1‑136 (MQ=255)

                                aGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTc                                                                                               >  2:245083/1‑140 (MQ=255)

                                aGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTc                                                                                               >  2:64126/1‑140 (MQ=255)

                                aGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTc                                                                                               >  2:940842/1‑140 (MQ=255)

                                  gggCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTcct                                                                                             >  2:69242/1‑139 (MQ=255)

                                  gggCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTcct                                                                                             >  1:510754/1‑139 (MQ=255)

                                  gggCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCg                                                                                             >  2:877076/1‑140 (MQ=255)

                                     cgcTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTat                                                                                          >  2:1182062/1‑139 (MQ=255)

                                     cgcTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTAc                                                                                          >  2:766637/1‑140 (MQ=255)

                                      gcTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACg                                                                                         <  1:766637/140‑1 (MQ=255)

                                         ggTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACgctg                                                                                      <  1:940842/140‑1 (MQ=255)

                                          gTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACgctgc                                                                                     >  2:897759/1‑140 (MQ=255)

                                           ttAGGAAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATTTCACCAGCGCGCCACCTGCATGTTTGCCCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACgctgct                                                                                    <  2:1159866/140‑1 (MQ=255)

                                                    aCCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCAt                                                                           >  2:977098/1‑140 (MQ=255)

                                                    aCCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCAt                                                                           >  2:890991/1‑140 (MQ=255)

                                                    aCCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCAt                                                                           >  2:295188/1‑140 (MQ=255)

                                                    aCCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCAt                                                                           >  2:584908/1‑140 (MQ=255)

                                                          aCGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCggg                                                                     >  1:167119/1‑140 (MQ=255)

                                                           cGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGa                                                                    <  1:245083/140‑1 (MQ=255)

                                                              tGAAAGGCTGGCTGGCACGGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAAtt                                                                 >  2:606130/1‑140 (MQ=255)

                                                              tGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAAtt                                                                 >  1:954299/1‑140 (MQ=255)

                                                              tGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAAtt                                                                 >  1:603291/1‑140 (MQ=255)

                                                               gAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAAttt                                                                >  2:944558/1‑140 (MQ=255)

                                                                  aGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCg                                                             <  2:1026467/140‑1 (MQ=255)

                                                                        gctggcACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGc                                                       >  2:995461/1‑140 (MQ=255)

                                                                        gctggcACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGc                                                       >  1:552534/1‑140 (MQ=255)

                                                                             cacaGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAAc                                                  >  1:247329/1‑140 (MQ=255)

                                                                             cacaGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAAc                                                  >  2:396009/1‑140 (MQ=255)

                                                                                  cTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAAccgccg                                             >  1:224726/1‑140 (MQ=255)

                                                                                  cTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAAccgccg                                             >  1:445162/1‑140 (MQ=255)

                                                                                  cTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAAccgccg                                             >  1:47384/1‑140 (MQ=255)

                                                                                  cTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAAccgccc                                             >  1:153070/1‑139 (MQ=255)

                                                                                    tCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCt                                           >  1:401338/1‑140 (MQ=255)

                                                                                    tCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCt                                           <  1:897759/140‑1 (MQ=255)

                                                                                      cTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGCATTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGACGGGAAATTCCCGGCTGCCAAACCGCCGCTTc                                         >  1:63968/1‑140 (MQ=255)

                                                                                       tGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTcc                                        <  1:944558/140‑1 (MQ=255)

                                                                                            aaTATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGttt                                   >  2:1152744/1‑140 (MQ=255)

                                                                                                 cACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTTCCCAACCGCCGCTTTCAGGTTTTTaa                              >  2:748801/1‑140 (MQ=255)

                                                                                                 cACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCaa                              <  2:954299/140‑1 (MQ=255)

                                                                                                  aCCAGCGCGCCCCCTGCTTTTTTGACCGCCACGGTATGCGGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAAc                             <  2:401338/140‑1 (MQ=255)

                                                                                                   ccAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACt                            >  1:235698/1‑140 (MQ=255)

                                                                                                   ccAGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACt                            >  2:1218305/1‑140 (MQ=255)

                                                                                                    aaGCCCGCCACCTGTATTTTGGACCGCCACGGTATGCTGGCGCTGCTGGCTGGCCGTTTTCTTGCATTGGTCCGTCCGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTg                           <  2:869903/139‑1 (MQ=255)

                                                                                                     aGCGCGCCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTgg                          >  1:719227/1‑140 (MQ=255)

                                                                                                       cgcgcCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGtt                        <  1:977098/140‑1 (MQ=255)

                                                                                                       cgcgcCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGtt                        >  2:941988/1‑140 (MQ=255)

                                                                                                         cgcCACCTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTaa                      <  1:1152744/140‑1 (MQ=255)

                                                                                                               ctgcgggTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCACCCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGAt                <  1:944202/134‑1 (MQ=255)

                                                                                                               cTGCATGTTTGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGAt                <  2:153070/140‑1 (MQ=255)

                                                                                                                       ttGACCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTgg        <  2:32970/140‑1 (MQ=255)

                                                                                                                          aCCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTc     >  2:311965/1‑140 (MQ=255)

                                                                                                                          aCCGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTc     >  2:553859/1‑140 (MQ=255)

                                                                                                                           ccGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCa    <  1:941988/140‑1 (MQ=255)

                                                                                                                            cGCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAg   <  2:224726/140‑1 (MQ=255)

                                                                                                                             gCCACGGTATGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGc  <  1:890991/140‑1 (MQ=255)

AGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGC  >  NC_000913/3153796‑3154060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A