Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A11 F48 I1 R1	62	93.4	3176452	99.2%	3151040	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,297,739	C→A	A134S (GCG→TCG)	yraQ ←	permease family protein YraQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,297,739	0	C	A	100.0%	255.1 / NA	74	A134S (GCG→TCG)	yraQ	permease family protein YraQ
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (32/42); total (32/42)

GCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACG  >  NC_000913/3297603‑3297873

gCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCcgacgc                                                                                                                                     >  2:26193/1‑140 (MQ=255)

   accaGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGAc                                                                                                                                  <  2:155389/140‑1 (MQ=255)

           aaTCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCg                                                                                                                          <  1:528160/140‑1 (MQ=255)

           aaTCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCg                                                                                                                          <  2:705534/140‑1 (MQ=255)

           aaTCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCg                                                                                                                          <  1:1425365/140‑1 (MQ=255)

             tCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGca                                                                                                                        <  1:1336630/140‑1 (MQ=255)

              cgccgcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGcac                                                                                                                       <  1:711864/140‑1 (MQ=255)

              agccgcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGATTGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGcac                                                                                                                       <  2:1281450/139‑1 (MQ=255)

               gccgcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGcaca                                                                                                                      >  2:1443931/1‑140 (MQ=255)

                ccgcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCAcag                                                                                                                     <  1:665627/140‑1 (MQ=255)

                ccgcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCAcag                                                                                                                     <  1:1241099/140‑1 (MQ=255)

                ccgcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCAcag                                                                                                                     <  1:859025/140‑1 (MQ=255)

                 cgcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCAcagc                                                                                                                    <  2:99357/140‑1 (MQ=255)

                  gcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCAcagca                                                                                                                   <  2:1383447/140‑1 (MQ=255)

                  gcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCAcagca                                                                                                                   >  1:599447/1‑140 (MQ=255)

                  acAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCAcagca                                                                                                                   <  2:1292081/139‑1 (MQ=255)

                      aaCCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTa                                                                                                               <  2:946925/140‑1 (MQ=255)

                      aaCCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTa                                                                                                               >  1:372230/1‑140 (MQ=255)

                      aaCCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTa                                                                                                               >  1:267871/1‑140 (MQ=255)

                       aCCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACTCCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTac                                                                                                              <  1:26193/140‑1 (MQ=255)

                       aCCCCAGCCGAGGACAAAGCCCACAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTac                                                                                                              <  2:942471/140‑1 (MQ=255)

                                   gACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCg                                                                                                  >  1:292784/1‑140 (MQ=255)

                                   gACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACAGGAGCCGCACAGCAGGTACACATCATGCCCg                                                                                                  <  2:1054055/140‑1 (MQ=255)

                                     cAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGc                                                                                                <  1:227867/140‑1 (MQ=255)

                                      aaaGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCa                                                                                               <  1:970947/140‑1 (MQ=255)

                                        aGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGTGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAAc                                                                                             >  1:1286721/1‑140 (MQ=255)

                                        aGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAAc                                                                                             >  1:1524195/1‑140 (MQ=255)

                                        aGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAAc                                                                                             >  1:629404/1‑140 (MQ=255)

                                        aGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAAc                                                                                             >  2:1117352/1‑140 (MQ=255)

                                            cATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGaaa                                                                                         <  1:727767/140‑1 (MQ=255)

                                             aTAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGaaaa                                                                                        <  1:532796/140‑1 (MQ=255)

                                               aaaCACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACa                                                                                      <  2:421104/140‑1 (MQ=255)

                                                 acacCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCTGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGc                                                                                    <  2:872720/140‑1 (MQ=255)

                                                 acacCACCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACTCATTCCCTAAGCGACCGGAGCCGAACAGCAGGAACACATCATGCCCGGCAACGAAAACAGc                                                                                    <  1:1491921/140‑1 (MQ=255)

                                                    ccAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGtt                                                                                 >  1:1190184/1‑140 (MQ=255)

                                                     cAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTc                                                                                >  1:181535/1‑140 (MQ=255)

                                                        cGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCca                                                                             >  1:519444/1‑140 (MQ=255)

                                                        cGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCca                                                                             >  1:1317208/1‑140 (MQ=255)

                                                          tCGCCGGGATTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGGTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACG‑AAACAGCGTTCCcagca                                                                          >  2:562215/1‑140 (MQ=255)

                                                            gCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCcagcag                                                                         >  1:402365/1‑140 (MQ=255)

                                                            gCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCcagcac                                                                         >  2:842966/1‑139 (MQ=255)

                                                                        acCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCTACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGaaa                                                             <  2:1140079/140‑1 (MQ=255)

                                                                         acGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAg                                                            <  2:519444/139‑1 (MQ=255)

                                                                          cGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAgc                                                           <  1:1288241/140‑1 (MQ=255)

                                                                           ggATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAgtg                                                          >  1:510055/1‑138 (MQ=255)

                                                                           ggATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAgcg                                                          >  1:1585096/1‑140 (MQ=255)

                                                                           ggATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAgcg                                                          >  2:190050/1‑140 (MQ=255)

                                                                              ttGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAACAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGa                                                       <  2:1507045/140‑1 (MQ=255)

                                                                                   cATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGcc                                                  <  1:64012/140‑1 (MQ=255)

                                                                                   cATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGcc                                                  <  1:1089789/140‑1 (MQ=255)

                                                                                      ccAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCaa                                               <  1:277674/140‑1 (MQ=255)

                                                                                      ccAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCaa                                               <  2:372230/140‑1 (MQ=255)

                                                                                      ccAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCaa                                               <  2:267871/140‑1 (MQ=255)

                                                                                        aGAATGCCAGCGCACCGCCCATCGACACCGGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGc                                             <  2:154977/140‑1 (MQ=255)

                                                                                         gAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCg                                            <  1:468667/140‑1 (MQ=255)

                                                                                           aTGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTa                                          >  2:434370/1‑140 (MQ=255)

                                                                                            tGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTAc                                         >  1:1086378/1‑140 (MQ=255)

                                                                                            tGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTAc                                         >  2:389205/1‑140 (MQ=255)

                                                                                               cAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGca                                      >  1:1318551/1‑140 (MQ=255)

                                                                                               cAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGca                                      >  1:1043723/1‑140 (MQ=255)

                                                                                               cAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGca                                      >  2:809171/1‑140 (MQ=255)

                                                                                               cAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCCCGAAAGCGCGATTGCCCAAGCGTACGca                                      >  1:1284678/1‑140 (MQ=255)

                                                                                                aGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGcaa                                     >  2:1258594/1‑140 (MQ=255)

                                                                                                    cACCGCCAATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCGTGCGCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCaacaac                                 <  2:651793/140‑1 (MQ=255)

                                                                                                      ccGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCa                               >  1:1440618/1‑140 (MQ=255)

                                                                                                       cGCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAg                              >  1:948354/1‑140 (MQ=255)

                                                                                                        gCCCATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGt                             >  2:463246/1‑140 (MQ=255)

                                                                                                           cATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGTGCGATTGCCCAAGCGTACGCAACAACCAGTCAc                          <  2:510055/140‑1 (MQ=255)

                                                                                                           cATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCAc                          <  1:1258594/140‑1 (MQ=255)

                                                                                                           cATCGACACCTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCAc                          <  2:184429/140‑1 (MQ=255)

                                                                                                                    cTGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCa                 <  2:292784/140‑1 (MQ=255)

                                                                                                                     tGTTGGCGACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAg                >  1:412030/1‑140 (MQ=255)

                                                                                                                            gACGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAGAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGa         <  1:1443931/140‑1 (MQ=255)

                                                                                                                              cGCATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAAt       >  2:136554/1‑140 (MQ=255)

                                                                                                                                cATTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCa     <  2:912225/140‑1 (MQ=255)

                                                                                                                                 aTTCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCaa    <  2:1440618/140‑1 (MQ=255)

                                                                                                                                   tCCCGACGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACg  <  1:1363884/140‑1 (MQ=255)

GCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACG  >  NC_000913/3297603‑3297873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A