Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I1 R1
|
24 |
670.1 |
22273598 |
98.8% |
22006314 |
140.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,015,479 |
A→G |
Y231H (TAC→CAC) |
ysgA ← |
putative dienelactone hydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,015,479 | 0 | A | G | 99.1%
| 3554.2
/ 5.8
| 855 | Y231H (TAC→CAC) | ysgA | putative dienelactone hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (3/5); new base G (433/412); total (437/418) |
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 870 total aligned reads displayed.
AATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGG > NC_000913/4015332‑4015626
|
tACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACg < 2:9407098/150‑1 (MQ=255)
ccaccCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGa > 1:9407600/1‑149 (MQ=255)
caccCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGAt < 1:9406389/149‑1 (MQ=255)
cccGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAAt > 2:9407613/1‑150 (MQ=255)
cGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAAtct > 1:9407622/1‑150 (MQ=255)
gTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATctct < 1:9406999/150‑1 (MQ=255)
gTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATctct < 2:9406854/150‑1 (MQ=255)
tCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTg > 2:9407636/1‑150 (MQ=255)
ttttCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTgcac < 1:9407443/137‑1 (MQ=255)
ttttCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCt > 1:9407643/1‑150 (MQ=255)
tttCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCtt > 2:9407652/1‑150 (MQ=255)
tctcATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTc > 1:9407660/1‑150 (MQ=255)
aTTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCa < 1:9406815/149‑1 (MQ=255)
aTTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCa < 1:9406582/149‑1 (MQ=255)
aTTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCAt > 1:9407677/1‑150 (MQ=255)
aGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCa < 2:9407071/144‑1 (MQ=255)
cGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTagcagc < 1:9406967/150‑1 (MQ=255)
aCTTCTTCCCACCATACTGCTTAAACCATTCCAGCNTACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGNGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTagca > 1:9407699/1‑146 (MQ=255)
aCTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGccc > 2:9407697/1‑150 (MQ=255)
aCTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGccc < 2:9406901/150‑1 (MQ=255)
aCTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGccc < 2:9407312/150‑1 (MQ=255)
cttcCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCa < 1:9406908/149‑1 (MQ=255)
cttcCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAg > 1:9407714/1‑150 (MQ=255)
tcCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAgc > 2:9407718/1‑149 (MQ=255)
accaTACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTg > 1:9407731/1‑150 (MQ=255)
aTACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGgcg < 2:9407128/150‑1 (MQ=255)
aTACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGgcg > 2:9407739/1‑150 (MQ=255)
aTACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGgcg < 1:9406652/150‑1 (MQ=255)
aCTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCa > 1:9407746/1‑150 (MQ=255)
tGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATCATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGgcgc < 2:9406807/147‑1 (MQ=255)
tGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTGTGCTTTCGCATTAGCAGCCCGc > 2:9407755/1‑135 (MQ=255)
cTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATg < 1:9407258/148‑1 (MQ=255)
ttAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGtt > 1:9407765/1‑150 (MQ=255)
tAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCCGCGCCTGGCGCATGGttt > 2:9407771/1‑150 (MQ=255)
aaaCCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGttt < 1:9406755/149‑1 (MQ=255)
aCCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCaa < 1:9406872/150‑1 (MQ=255)
ccATTCCAGCATACGCTGCCAACCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAAc > 2:9407786/1‑150 (MQ=255)
cATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACg > 1:9407789/1‑150 (MQ=255)
ttCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGct < 1:9406934/150‑1 (MQ=255)
tCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGctc > 1:9407804/1‑150 (MQ=255)
ccAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGctct > 2:9407813/1‑150 (MQ=255)
ccAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAACTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCACGGTTTCAACGctc < 1:9407345/149‑1 (MQ=255)
cAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCtctc > 1:9407817/1‑150 (MQ=255)
aCGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTg > 2:9407830/1‑147 (MQ=255)
gCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGa < 2:9407004/149‑1 (MQ=255)
tGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATg > 1:9407839/1‑150 (MQ=255)
ccagccaTCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCt > 2:9407847/1‑150 (MQ=255)
cagccaTCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTg < 1:9406719/150‑1 (MQ=255)
gccaTCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGt > 1:9407863/1‑149 (MQ=255)
gccaTCTTCTGCAGATGCGGCATGATACCTCGGGCGATAATCAGCGTTGATTGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCNGGCGCATGGTTTCAACGCTCTCGTGCGGAATGCTGt > 2:9407860/1‑149 (MQ=255)
ccaTCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTa < 2:9407034/150‑1 (MQ=255)
caTCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTAt > 2:9407873/1‑150 (MQ=255)
aTCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATc > 1:9407880/1‑150 (MQ=255)
ctGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGac > 1:9407895/1‑150 (MQ=255)
cAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGacca < 1:9407142/149‑1 (MQ=255)
aGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGaccacc < 2:9407262/150‑1 (MQ=255)
gATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTg < 2:9407223/73‑1 (MQ=255)
gATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGaccac > 2:9407908/1‑148 (MQ=255)
gCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCata < 2:9406752/149‑1 (MQ=255)
cGGCATGATAGCTCGGGCGATGATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCatat < 2:9406927/149‑1 (MQ=255)
cGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCNCGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCatat > 1:9407915/1‑149 (MQ=255)
ggCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATaa < 1:9406844/150‑1 (MQ=255)
gCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAg > 1:9407924/1‑150 (MQ=255)
aggATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCt < 2:9406614/90‑1 (MQ=255)
aTGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGcc > 2:9407934/1‑150 (MQ=255)
tGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCg < 1:9407023/150‑1 (MQ=255)
tGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCg < 1:9407177/150‑1 (MQ=255)
tAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCgaga < 1:9407052/150‑1 (MQ=255)
gCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGACTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGaa < 2:9406472/149‑1 (MQ=255)
cTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCg > 2:9407947/1‑144 (MQ=255)
cTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATc > 1:9407946/1‑150 (MQ=255)
gggCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCgg < 1:9407111/149‑1 (MQ=255)
gggCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCgg < 2:9407895/149‑1 (MQ=255)
gggCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCg < 1:257995/148‑1 (MQ=255)
ggCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGttt < 2:9406698/93‑1 (MQ=255)
gCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGgcgc < 2:9407560/150‑1 (MQ=255)
gCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGgcgc < 2:9407423/150‑1 (MQ=255)
gCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGgcgc > 1:9407960/1‑150 (MQ=255)
gATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCGCTGCTTTCGCATTCGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGt > 2:9407965/1‑150 (MQ=255)
tAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTa < 2:9407367/150‑1 (MQ=255)
tCAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGa < 2:9407192/150‑1 (MQ=255)
cAGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGtt > 2:9407978/1‑145 (MQ=255)
aGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGtt > 1:9407981/1‑144 (MQ=255)
aGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAg < 1:9407087/147‑1 (MQ=255)
aGCGTTGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATc < 2:9407290/150‑1 (MQ=255)
ttGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGtt < 1:9407202/150‑1 (MQ=255)
ttGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGt < 1:9407370/149‑1 (MQ=255)
tGAATGCATGCCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGtt > 1:9407994/1‑149 (MQ=255)
tgcatgcCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGat < 1:9407296/150‑1 (MQ=255)
gcatgcCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGata > 2:9408004/1‑150 (MQ=255)
catgcCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATGTAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGatat > 1:9408008/1‑150 (MQ=255)
catgcCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGatat < 2:9407169/150‑1 (MQ=255)
atgcCCGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGc < 2:9406971/116‑1 (MQ=255)
cccGGCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCaa < 1:9407237/149‑1 (MQ=255)
ggCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAgg > 2:9408024/1‑150 (MQ=255)
ggCGTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAg > 1:9408025/1‑149 (MQ=255)
cGTCCGGGAGCACGATAATCTCTGCTTTCGCATTagcag > 2:9408035/1‑39 (MQ=255)
gTCCGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgtt < 2:9407681/149‑1 (MQ=255)
cGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttgt > 1:9408054/1‑148 (MQ=255)
cGGGTGCACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGttt > 2:9408050/1‑150 (MQ=255)
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AATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGG > NC_000913/4015332‑4015626
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
