Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I1 R1
|
24 |
670.1 |
22273598 |
98.8% |
22006314 |
140.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,384,025 |
G→A |
A63T (GCT→ACT) |
yjeM → |
putative transporter YjeM |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,384,025 | 0 | G | A | 99.5%
| 3575.5
/ 0.8
| 822 | A63T (GCT→ACT) | yjeM | putative transporter YjeM |
| Reads supporting (aligned to +/- strand): ref base G (3/1); new base A (428/390); total (431/391) |
| Fisher's exact test for biased strand distribution p-value = 6.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.87e-01 |
Only 100 of 827 total aligned reads displayed.
ATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTGCTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTGGGTACCGTTCTC > NC_000913/4383878‑4384170
|
ttGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTAt > 1:10390728/1‑150 (MQ=255)
gatgatCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATc > 2:10390733/1‑149 (MQ=255)
tgatCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCa < 1:10390030/150‑1 (MQ=255)
tgatCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCa < 1:10390311/150‑1 (MQ=255)
tttACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGAAGCTACTTATCGCAaag > 1:10390748/1‑148 (MQ=255)
cTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAaagaagaag > 1:10390758/1‑150 (MQ=255)
ttCCGTATTTGGATGTGCCAATAGCCCATCGGCTTCTTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCGTAATGAGGGCTGAAATGGGAGCTACTTATCGCAaagaagaa < 2:10389614/148‑1 (MQ=255)
ccGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAgg < 2:10390308/148‑1 (MQ=255)
gTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCgg > 1:10390772/1‑149 (MQ=255)
tATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTa > 2:10390775/1‑150 (MQ=255)
tttGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTAt < 1:10389894/149‑1 (MQ=255)
tttGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTAt < 1:10390212/149‑1 (MQ=255)
ttGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATc > 1:10390790/1‑149 (MQ=255)
tGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTa > 2:10390792/1‑150 (MQ=255)
aTTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTc > 1:10390808/1‑150 (MQ=255)
tttGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTcc < 1:10389752/150‑1 (MQ=255)
ttGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAaagaagaag > 2:10390813/1‑135 (MQ=255)
tGCCAATCGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCt < 2:10390340/149‑1 (MQ=255)
tGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCt < 1:10389989/149‑1 (MQ=255)
ccAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGa < 1:10389212/150‑1 (MQ=255)
cAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGAt < 1:10389941/150‑1 (MQ=255)
agtAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGAt > 1:10390825/3‑149 (MQ=255)
aaTAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATg < 2:10390387/150‑1 (MQ=255)
aTAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTg > 2:10390831/1‑145 (MQ=255)
aGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGaa < 2:10390289/149‑1 (MQ=255)
ccATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGaataat < 1:10390394/150‑1 (MQ=255)
aTCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAg > 2:10390845/1‑150 (MQ=255)
tCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAg < 2:10390470/149‑1 (MQ=255)
cGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGa < 2:10390197/138‑1 (MQ=255)
cGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAgtg > 1:10390851/1‑150 (MQ=255)
cTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTc > 1:10390863/1‑149 (MQ=255)
cTTATTACTTAATGGCTTATAGNGCGATCCCCTTTTATATATTTTCTGCATTGTTATTCTATATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCg < 2:10390446/150‑1 (MQ=255)
ttattaCTTAATGGGTTATAGTGCGATGCCCTTTTATATATTTTCTGCATAGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAANAAGGCGGTATCTATTCCTGGATGAATAATAGTGTc > 2:10390866/1‑148 (MQ=255)
cTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCg > 2:10390880/1‑143 (MQ=255)
cTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACg > 1:10390879/1‑150 (MQ=255)
aTGGGTTGTAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGtttt < 2:10389763/150‑1 (MQ=255)
aTGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGttt < 1:10390267/149‑1 (MQ=255)
tGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTg < 1:10390230/150‑1 (MQ=255)
tGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCGTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCg > 2:10390894/1‑108 (MQ=255)
gTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCNCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTGTTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCt > 1:10390897/1‑150 (MQ=255)
taGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCa < 2:10390356/149‑1 (MQ=255)
gTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCAtt > 1:10390914/1‑149 (MQ=255)
gTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTg < 2:10390174/150‑1 (MQ=255)
gTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTg > 2:10390911/1‑150 (MQ=255)
cGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGt < 1:10390448/149‑1 (MQ=255)
cGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGt < 1:10390496/149‑1 (MQ=255)
cGATTCCCTTTTATATATTTTCTGCATTGTTACTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTa < 1:10390142/150‑1 (MQ=255)
gATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAATTGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCg > 2:10390931/1‑125 (MQ=255)
gATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTAc > 1:10390929/1‑150 (MQ=255)
aTTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACg < 2:10390079/150‑1 (MQ=255)
ccTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGttt < 1:10390564/149‑1 (MQ=255)
ccTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTa > 1:10390943/1‑150 (MQ=255)
cTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTAt < 1:10390124/150‑1 (MQ=255)
ttttATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCt > 1:10390957/1‑94 (MQ=255)
ttttATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGttt > 2:10390954/1‑147 (MQ=255)
ttATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCTGTATCTATTCCTGGATGATTAATAGTGTCGGACCACGTTTTGCCTTCATTgg > 2:10390967/1‑138 (MQ=255)
atatatTTTTTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGt > 2:10390981/1‑150 (MQ=255)
atatatTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTAGATGAATACTAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGt > 1:10390980/1‑150 (MQ=255)
atatTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGAcc < 2:10390036/116‑1 (MQ=255)
atatTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGt < 2:10389954/148‑1 (MQ=255)
tatTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGtttt < 2:10390149/150‑1 (MQ=255)
atTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGaat > 2:10391000/1‑100 (MQ=255)
atTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTc > 1:10390994/1‑150 (MQ=255)
ttttCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGttt < 2:10390504/147‑1 (MQ=255)
ttttCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTc < 1:10390046/149‑1 (MQ=255)
tttCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCct > 1:10391010/1‑150 (MQ=255)
tCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCctct > 2:10391019/1‑150 (MQ=255)
cTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCctct > 1:10391023/1‑149 (MQ=255)
cATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTGCTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGaataat > 2:10391038/1‑95 (MQ=255)
cATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTtata < 1:10390172/150‑1 (MQ=255)
cATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTtat < 1:10390428/149‑1 (MQ=255)
aTTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTatat < 2:10390262/150‑1 (MQ=255)
aTTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTatat > 1:10391042/1‑150 (MQ=255)
ttGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTatat > 2:10391048/1‑149 (MQ=255)
ttATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATatcatc > 1:10391060/1‑150 (MQ=255)
ttATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATatcat < 1:10390059/149‑1 (MQ=255)
tATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCt > 2:10391064/1‑150 (MQ=255)
tCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTg < 2:10389841/148‑1 (MQ=255)
tCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTg > 2:10391078/1‑148 (MQ=255)
cTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATGGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGa < 1:10390351/149‑1 (MQ=255)
tttATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATg > 1:10391083/1‑150 (MQ=255)
aTTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGt < 1:10390610/149‑1 (MQ=255)
ttCCGTTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGNAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTg < 2:10390237/149‑1 (MQ=255)
ttCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTCTCTATTCCTGGTTGAATAATAGTGTCGGACGACGTTTTGCCTTCATTGGTACGTTTAt > 2:10391096/1‑118 (MQ=255)
ttCCATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTgc < 2:10390587/150‑2 (MQ=255)
ccATTCGCCTTAATGATGGCTGAAATGGGGGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAg > 1:10391097/1‑149 (MQ=255)
ccATTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAaagaagaag < 2:10390217/52‑1 (MQ=255)
aTTCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTg > 2:10391110/1‑145 (MQ=255)
ttCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTAcc < 1:10390098/150‑1 (MQ=255)
ttCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTGGCCTTCATTg > 1:10391119/1‑103 (MQ=255)
tCGCCTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCt > 2:10391121/1‑150 (MQ=255)
cTTAATGATGGCTGAAATGGGAGTTACTTATCGGAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCt > 2:10391135/1‑131 (MQ=255)
cTTAATGATGGCTGAAATGGGAGCTACTTATCGCAAAGANGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGTACCACGTTTAGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCcgc < 2:10390621/150‑1 (MQ=255)
aaTGATGGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGa > 1:10391145/1‑149 (MQ=255)
tgatgGCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACTTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGATAg > 2:10391148/1‑150 (MQ=255)
gCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTgg > 1:10391162/1‑150 (MQ=255)
gCTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTg < 2:10390404/149‑1 (MQ=255)
cTGAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTAt < 2:10389988/44‑1 (MQ=255)
gAAATGGGAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTGGGTa > 2:10391165/1‑150 (MQ=255)
gAGCTACTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTGGGTACCGTtct > 1:10391179/1‑150 (MQ=255)
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ATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTGCTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTGGGTACCGTTCTC > NC_000913/4383878‑4384170
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
