Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I1 R1
|
28 |
562.2 |
19051950 |
96.7% |
18423235 |
140.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,399,887 |
A→G |
Q212Q (CAA→CAG) |
miaA → |
tRNA dimethylallyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,399,887 | 0 | A | G | 99.0%
| 2560.0
/ 5.0
| 610 | Q212Q (CAA→CAG) | miaA | tRNA dimethylallyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/5); new base G (287/317); total (288/322) |
| Fisher's exact test for biased strand distribution p-value = 2.21e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 612 total aligned reads displayed.
TGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTACCTTGAAGGCG > NC_000913/4399740‑4400032
|
aTCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCa < 1:8743632/150‑1 (MQ=255)
ccACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCCtt > 2:8744174/1‑150 (MQ=255)
acaAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCAtt > 1:8744180/1‑148 (MQ=255)
aaaGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCGTCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGagc < 2:8743400/150‑1 (MQ=255)
aaGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGagca < 2:8743489/150‑1 (MQ=255)
ggCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGagcagc > 1:8744189/1‑150 (MQ=255)
cTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGt > 1:8744200/1‑150 (MQ=255)
ttCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGttt > 1:8744209/1‑150 (MQ=255)
tCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGttt < 1:8743363/149‑1 (MQ=255)
tCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGttt < 2:8744107/149‑1 (MQ=255)
cccGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGtttt > 1:8744219/1‑149 (MQ=255)
ggCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTGCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGagcag < 2:8743540/139‑1 (MQ=255)
gCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTtcat > 1:8744230/1‑147 (MQ=255)
gCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAg < 1:8743670/150‑1 (MQ=255)
cTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATg < 1:8743691/150‑1 (MQ=255)
tGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGt > 1:8744239/1‑150 (MQ=255)
gAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGt < 2:8743304/148‑1 (MQ=255)
gTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGc < 2:8743667/149‑1 (MQ=255)
ttttttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCtt > 1:8744251/1‑149 (MQ=255)
tttttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTc < 1:8743569/149‑1 (MQ=255)
tttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAg < 2:8743888/149‑1 (MQ=255)
ttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAg < 2:8743752/148‑1 (MQ=255)
ttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGt > 1:8744261/1‑150 (MQ=255)
ttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGt > 2:8744260/1‑150 (MQ=255)
cATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGtt < 1:8743608/149‑1 (MQ=255)
aTTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGtttt < 1:8743912/150‑1 (MQ=255)
ttCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGt < 2:8743714/145‑1 (MQ=255)
gggTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAg > 2:8744274/1‑149 (MQ=255)
ggTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAg > 1:8744278/1‑148 (MQ=255)
tAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGa < 2:8743790/150‑1 (MQ=255)
aaaaCTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAg > 1:8744286/1‑148 (MQ=255)
aaCTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAg > 2:8744292/1‑149 (MQ=255)
aaCTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGt < 1:8743811/150‑1 (MQ=255)
ttAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTc > 2:8744301/1‑147 (MQ=255)
ttAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCgg > 1:8744302/1‑150 (MQ=255)
tAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCgg < 1:8743771/149‑1 (MQ=255)
aCGGAAGTGACGCAAACGTCAGGAGACGCTCTACCGGATCAGGGGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGt < 1:8743826/143‑1 (MQ=255)
cGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTcc > 2:8744313/1‑144 (MQ=255)
ggAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCt > 1:8744316/1‑150 (MQ=255)
ggAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCt < 1:1840312/150‑1 (MQ=255)
ggAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCt < 2:8743865/150‑1 (MQ=255)
gAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCtt < 1:8743790/150‑1 (MQ=255)
aaCTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCAGGGCGCttt > 2:8744323/1‑150 (MQ=255)
cTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGNGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCttttt < 1:8743742/150‑1 (MQ=255)
tGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTg > 1:8744331/1‑150 (MQ=255)
tGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCAGCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTgg < 2:8743644/114‑1 (MQ=255)
aCGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGcc < 1:8743483/150‑1 (MQ=255)
cGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGccc > 2:8744333/1‑150 (MQ=255)
gCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGccc > 1:8744344/1‑149 (MQ=255)
gCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCg < 1:8743528/150‑1 (MQ=255)
cAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCga < 2:8743723/150‑1 (MQ=255)
aaaCGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGGGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGccc > 2:8744350/1‑147 (MQ=255)
gTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCgag > 1:8744357/1‑146 (MQ=255)
aGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGAttt > 1:8744366/1‑150 (MQ=255)
ggAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTg < 1:8743942/150‑1 (MQ=255)
gagaCGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCt > 2:8744366/1‑130 (MQ=255)
cGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATAc > 1:8744376/1‑150 (MQ=255)
tctACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTg < 2:8743625/68‑1 (MQ=255)
tctACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGa > 1:8744384/1‑150 (MQ=255)
tACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACt > 2:8744387/1‑150 (MQ=255)
aCCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACtt > 1:8744392/1‑150 (MQ=255)
ccGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACtt < 1:8743707/149‑1 (MQ=255)
cGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACt < 2:8743934/147‑1 (MQ=255)
cGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTg < 2:8743697/149‑1 (MQ=255)
tATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCt < 2:8743873/150‑1 (MQ=255)
tATCAGGTGCAGCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTTAGCAGCGTTGTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCttttt < 2:8743603/120‑1 (MQ=255)
tATCAGATGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGATGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGATTTTTGCCCGAGGATATTTGCATACCGACTTGCCt < 2:8744005/150‑1 (MQ=255)
aGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTcc < 2:8743773/149‑1 (MQ=255)
aGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCa > 1:8744403/1‑150 (MQ=255)
aGGTGCATCACTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCt > 2:8744402/1‑112 (MQ=255)
aTCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGt < 2:8743915/149‑1 (MQ=255)
tCAGTTCGCCATCGCCCCGGCGAGCAGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGACGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGtt > 2:8744411/1‑149 (MQ=255)
cAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGagca < 2:8743507/53‑1 (MQ=255)
aGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGc < 1:8744042/149‑1 (MQ=255)
aGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCg > 1:8744419/1‑150 (MQ=255)
ttCGCCATCGCCCCGGCGGGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTg > 2:8744425/1‑120 (MQ=255)
ttCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTc < 2:8743439/142‑1 (MQ=255)
cGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTgg < 2:8743837/149‑1 (MQ=255)
gCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTggg < 1:8744011/149‑1 (MQ=255)
ccATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGGGGAGATTTGCATACGGACTTGCCTTCCATTCg < 2:8743580/139‑1 (MQ=255)
ccATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCa > 1:8744435/1‑135 (MQ=255)
ccATCGCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGt > 2:8744432/1‑149 (MQ=255)
gCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCtttt > 2:8744445/1‑95 (MQ=255)
gCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCg < 2:8743951/149‑1 (MQ=255)
gCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGc < 1:8744170/150‑1 (MQ=255)
gCCCCGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTACATTCGTTACGTGGGTTATCGc > 1:8744446/1‑150 (MQ=255)
cccGGCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGcc < 2:8743984/149‑1 (MQ=255)
cGGCGAGCCGTGAACTGCTCCCTCAGCGCATTGAGCAGCGTTTTCATCAGATGTTTGCTTTAGGTTTTGTAGCAGAAGTCCGGGCGCTTTTTGCCCGTGGAGATTTGCATACGGACTTGCCTTCCATTCGTTTTGTGGGTTATTGc > 1:8744457/1‑146 (MQ=255)
ggCGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGAt < 1:8743655/150‑1 (MQ=255)
cGAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGAtgt < 1:8743976/150‑1 (MQ=255)
gAGCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGAtgtg < 1:8744096/150‑1 (MQ=255)
gAGCCGTGAACTGCTCCAGCAGTGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGCTCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGAtgtc > 2:8744461/1‑149 (MQ=255)
gCCGTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGt > 1:8744469/1‑150 (MQ=255)
ccatGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTc > 2:8744471/4‑150 (MQ=255)
gTGAACTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGCTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCtt < 1:8743847/150‑1 (MQ=255)
aaCTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTAcc > 1:8744481/1‑150 (MQ=255)
aCTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTACCt < 2:8743806/150‑1 (MQ=255)
aCTGCTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTACCt < 1:8743892/150‑1 (MQ=255)
cTCCATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTACCTTGaa < 2:8744228/150‑1 (MQ=255)
cATCAGCGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTACCTTGAAGGc > 1:8744489/1‑150 (MQ=255)
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TGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTACCTTGAAGGCG > NC_000913/4399740‑4400032
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
