Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I1 R1
|
24 |
670.1 |
22273598 |
98.8% |
22006314 |
140.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,518,040 |
A→G |
C66R (TGC→CGC) |
fecI ← |
RNA polymerase sigma factor FecI |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,518,040 | 0 | A | G | 99.2%
| 2676.9
/ 4.1
| 637 | C66R (TGC→CGC) | fecI | RNA polymerase sigma factor FecI |
| Reads supporting (aligned to +/- strand): ref base A (1/4); new base G (325/306); total (326/311) |
| Fisher's exact test for biased strand distribution p-value = 2.06e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01 |
Only 100 of 651 total aligned reads displayed.
GAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCAGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTCAGCCAGCTTTTCAACCAGCCGTGATGTGTGCCA > NC_000913/4517894‑4518185
|
gaggagTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCggag > 2:10747069/1‑150 (MQ=255)
aggagTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCgga > 1:10747074/1‑148 (MQ=255)
agTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGaggaag < 2:10746189/150‑1 (MQ=255)
ttGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGaggaagg < 1:10746188/149‑1 (MQ=255)
ttGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGaggaag > 1:10747086/1‑148 (MQ=255)
gTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAg < 1:10746421/149‑1 (MQ=255)
aGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGaggaa < 2:10746859/143‑1 (MQ=255)
gggTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAg > 2:10747096/1‑150 (MQ=255)
gTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGa > 1:10747103/1‑150 (MQ=255)
ctcGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTGCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGTAGGAAGGAGCGAGGATc > 2:10747111/1‑150 (MQ=255)
gAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATcgcg > 1:10747118/1‑150 (MQ=255)
gAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATc < 1:10746665/147‑1 (MQ=255)
aGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCgg < 1:10746949/150‑1 (MQ=255)
ttGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAt > 1:10747126/1‑150 (MQ=255)
tGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAtc > 2:10747133/1‑150 (MQ=255)
ggCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAtc < 1:10747095/149‑1 (MQ=255)
ggCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAtc < 2:10746391/149‑1 (MQ=255)
ggCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCAGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACNGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAtc < 1:10746602/149‑1 (MQ=255)
cTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAtcgtc < 1:10746442/150‑1 (MQ=255)
cTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAtcgtc < 1:10746358/150‑1 (MQ=255)
cTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAtcgtc > 1:10747138/1‑150 (MQ=255)
tttCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAtcgtc > 1:10747144/1‑149 (MQ=255)
ttCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGAGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGAt > 2:10747154/1‑144 (MQ=255)
cgTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGc < 1:10746322/150‑1 (MQ=255)
gTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGc < 1:10746231/149‑1 (MQ=255)
gTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCg > 1:10747162/1‑150 (MQ=255)
cTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGttt > 2:10747171/1‑149 (MQ=255)
cTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTc < 1:10746293/150‑1 (MQ=255)
cTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTc < 1:10746117/150‑1 (MQ=255)
cAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGc > 1:10747177/1‑150 (MQ=255)
gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGa < 1:10746379/150‑1 (MQ=255)
tGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGAc < 2:10746635/150‑1 (MQ=255)
tGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCAGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGAc > 2:10747183/1‑150 (MQ=255)
aaGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCa < 1:10746526/150‑1 (MQ=255)
gcgcTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTa > 1:10747195/1‑150 (MQ=255)
gcgcTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTa > 2:10747196/1‑150 (MQ=255)
gcTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGTGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCgaga < 2:10746158/130‑1 (MQ=255)
cTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTAc < 2:10746245/148‑1 (MQ=255)
cccccTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTc < 2:10746694/133‑1 (MQ=255)
cccccTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCg < 1:10746697/148‑1 (MQ=255)
cccccTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGc > 1:10747210/1‑149 (MQ=255)
cccccTCCGGCATAAGCGCCAGCATCTCCACATACGCTTTTTCCAGCGCGNTTCGGCGAAACAGGTCCACCATCACGCGTTCGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCTTCGAGAGCGTTTCGCTGACCATTACCCg < 2:10746673/148‑1 (MQ=255)
ccccTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTg < 2:10746334/136‑1 (MQ=255)
cccTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCaa > 2:10747214/1‑149 (MQ=255)
ccTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCaaaa < 1:10746046/150‑1 (MQ=255)
tCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCaaaa > 1:10747224/1‑148 (MQ=255)
ggCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAgt > 2:10747236/1‑149 (MQ=255)
gCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAgtgt < 1:10746455/150‑1 (MQ=255)
cATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTc < 1:10746739/150‑1 (MQ=255)
aTAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTcc > 1:10747239/1‑150 (MQ=255)
aGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTgg < 1:10746829/150‑1 (MQ=255)
aGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTgg > 2:10747246/1‑150 (MQ=255)
cgcCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTggg < 2:10746499/149‑1 (MQ=255)
gcCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCt < 2:10746536/119‑1 (MQ=255)
ccAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTc > 2:10747258/1‑142 (MQ=255)
ccAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCa < 2:10746590/149‑1 (MQ=255)
cAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAAt > 1:10747261/1‑150 (MQ=255)
cATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGt > 2:10747268/1‑149 (MQ=255)
aTCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCa > 1:10747276/1‑150 (MQ=255)
aTCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCa < 1:10746403/150‑1 (MQ=255)
tctcCAGATACGCTTTTTCCAGGGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCaaa < 1:10746794/128‑1 (MQ=255)
ctcCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATc > 2:10747285/1‑150 (MQ=255)
tcCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCt > 1:10747288/1‑150 (MQ=255)
cAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTg < 1:10746475/149‑1 (MQ=255)
gATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCAt < 1:10746570/150‑1 (MQ=255)
aTACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCAt < 2:10746436/149‑1 (MQ=255)
aTACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCAt > 1:10747297/1‑149 (MQ=255)
gCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCaa > 2:10747301/1‑148 (MQ=255)
ttttCCAGCGCGTTTCGGCGAAACAGGTCCACCATCCCGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCa > 2:10747311/1‑129 (MQ=255)
tttCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGc < 1:10746256/148‑1 (MQ=255)
ttCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGa > 1:10747317/1‑150 (MQ=255)
ccAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAACAGCAGACt > 2:10747323/1‑150 (MQ=255)
ccAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGAc < 2:10746930/149‑1 (MQ=255)
ccAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGAc < 1:10744648/149‑1 (MQ=255)
cAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTg < 1:10746772/150‑1 (MQ=255)
cAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTg > 1:10747327/1‑150 (MQ=255)
aGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCAGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTgg < 2:10746273/120‑1 (MQ=255)
gcgcGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAATCAGACt < 2:10746725/147‑1 (MQ=255)
cgcgTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGc < 2:10746564/141‑1 (MQ=255)
gcgTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGAGTCCTGGGCAACGTCATCTGCATCAAAAGCAGACTGGAGt > 1:10747336/1‑150 (MQ=255)
cgTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTg < 2:10746474/129‑1 (MQ=255)
tCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTgcg > 1:10747346/1‑150 (MQ=255)
cGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTgcg < 1:10746508/149‑1 (MQ=255)
ggCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTgcgc > 2:10747351/1‑149 (MQ=255)
gCGAAACAGGTCCCCCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCa < 2:10745865/86‑1 (MQ=255)
gAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGt > 1:10747360/1‑148 (MQ=255)
gAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTca < 1:10746643/150‑1 (MQ=255)
aaaCAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTcag > 2:10747364/1‑150 (MQ=255)
aCAGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTcag > 1:10747372/1‑148 (MQ=255)
aGGTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATNGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCAGCTGCATCAAAAGCAGACTGGAGTTTGCGCGTcagccag > 1:10747378/1‑150 (MQ=255)
gTCCACCATCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTCAGCCAGCt > 1:10747385/1‑150 (MQ=255)
accaTCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCCTTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCa > 2:10747393/1‑120 (MQ=255)
ccaTCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTCAGCCAGCTTTTCa < 1:10746549/150‑1 (MQ=255)
caTCACGCGTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTCAGCCAGCTTTTCaa > 1:10747395/1‑150 (MQ=255)
gcgTTTGGCGATAGTGAGGAGGAAGGAGCGAGGATCGCGGATCGACGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAACAGCAGACTGGAGTTTGCGCGTCAGCCAGATTTTCAACCAGc > 2:10747407/1‑149 (MQ=255)
gTTTGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTCAGCCAGCTTTTCAACCAGCCGt > 1:10747412/1‑150 (MQ=255)
ttGGCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTCAGCCAGCTTTTCAACCAGCCg > 2:10747417/1‑147 (MQ=255)
gCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTCAGCCAGCTTTTCAACCAGCCGTGAtgt > 1:10747423/1‑150 (MQ=255)
gCGATAGTGCGGAGGAAGGAGCGAGGATCGCGGATCGNCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCATAAGCAGACTGGAGTTTGCGCGTCAGCCAGCTTTTCAACCAGCCGTGAtgt < 2:10746782/150‑1 (MQ=255)
tGCGGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTCAGCCAGCTTTTCAACCAGCCGTGATGTGTGCCa > 1:10747433/1‑149 (MQ=255)
|
GAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCAGAGGAAGGAGCGAGGATCGCGGATCGTCGAGAGCGTTTCGCTGACCATTACCCGCAAAAAAGTGTCCTGGGCAATGTCATCTGCATCAAAAGCAGACTGGAGTTTGCGCGTCAGCCAGCTTTTCAACCAGCCGTGATGTGTGCCA > NC_000913/4517894‑4518185
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
