Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F13 I1 R1
|
21 |
2440.9 |
80198605 |
99.5% |
79797611 |
141.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,097,643 |
A→G |
noncoding (10/88 nt) |
serX ← |
tRNA‑Ser |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,097,643 | 0 | A | G | 99.7%
| 9006.8
/ 3.8
| 2155 | noncoding (10/88 nt) | serX | tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base A (5/2); new base G (1056/1090); total (1062/1093) |
| Fisher's exact test for biased strand distribution p-value = 2.82e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 2172 total aligned reads displayed.
CTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTT > NC_000913/1097496‑1097789
|
tcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGgcac > 1:9395746/1‑150 (MQ=255)
aTCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGgca < 1:9392381/147‑1 (MQ=255)
tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCt > 1:9395777/1‑149 (MQ=255)
cccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCa < 1:9393183/149‑1 (MQ=255)
cGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCaaa > 2:9395826/1‑150 (MQ=255)
tgtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAAtt > 1:9395861/1‑149 (MQ=255)
tgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTgcg < 2:9393109/150‑3 (MQ=255)
tgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTc < 1:9393733/150‑1 (MQ=255)
gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTc > 2:9395891/1‑149 (MQ=255)
tgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCaa < 2:9393542/142‑1 (MQ=255)
gCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGtt > 1:9395911/1‑150 (MQ=255)
atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCaca > 2:9395947/1‑137 (MQ=255)
tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTg > 1:9395952/1‑150 (MQ=255)
cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATATGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCtt < 1:9392756/150‑1 (MQ=255)
gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTc < 1:9396000/147‑1 (MQ=255)
gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCtt > 2:9396007/1‑149 (MQ=255)
aaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGc > 1:9396037/1‑149 (MQ=255)
aaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTc > 2:9396062/1‑143 (MQ=255)
aaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTgg < 1:9395583/150‑1 (MQ=255)
aaGCCCGTACTTTCGTACTAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGgcac < 2:9392799/117‑1 (MQ=255)
aaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACAGACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAAc < 1:9393331/150‑1 (MQ=255)
aaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAAc > 2:9396095/1‑150 (MQ=255)
cccGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACggg < 1:9393619/150‑1 (MQ=255)
ccGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTCCt > 2:9396148/1‑141 (MQ=255)
ccGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACC‑CACCAAATTGTCGTTCCTGTCTTGCTGGAACGGgcg > 1:9396137/1‑150 (MQ=255)
gTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGgcgc > 1:9396169/1‑150 (MQ=255)
cTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTaa > 1:9396209/1‑150 (MQ=255)
tttCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTaa < 1:9396085/149‑1 (MQ=255)
ttCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCt > 2:9396235/1‑146 (MQ=255)
tCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCtt > 1:9396246/1‑130 (MQ=255)
cGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAAttt < 2:9394211/149‑1 (MQ=255)
gTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGgcg > 2:9396274/1‑141 (MQ=255)
gTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTa < 2:9393917/149‑1 (MQ=255)
cGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAggg < 1:9393067/149‑1 (MQ=255)
cGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAggg > 1:9396298/1‑149 (MQ=255)
cGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAggg < 2:9394552/149‑1 (MQ=255)
cGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGa < 2:9394127/150‑1 (MQ=255)
gCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTg > 1:9396336/1‑126 (MQ=255)
ctctTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATc < 1:9393487/150‑1 (MQ=255)
ctctTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTGTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCACATTGTCGTTCCTGTCTTGCTGGAACGGGCGCtc > 2:9396344/1‑136 (MQ=255)
ttcttTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACCCTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTNTTGCTGGAACggg > 2:9396385/1‑129 (MQ=255)
ttcttTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCAt > 1:9396378/1‑149 (MQ=255)
ttAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCt > 1:9396414/1‑150 (MQ=255)
tAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGAcc < 1:9394217/148‑1 (MQ=255)
aaTATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAg > 1:9396448/1‑150 (MQ=255)
atatGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAgg > 2:9396454/1‑150 (MQ=255)
cGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGa > 2:9396491/1‑137 (MQ=255)
gTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACaaa > 1:9396500/1‑150 (MQ=255)
gggggggATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGa > 2:9396543/1‑136 (MQ=255)
gggggggATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACttt > 1:9396534/1‑150 (MQ=255)
ggggggATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACttt < 1:9394444/149‑1 (MQ=255)
ggATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGaa < 1:9394373/150‑1 (MQ=255)
gATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACttttt < 2:9394037/146‑1 (MQ=255)
ttCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGaaaaa < 1:9394493/150‑1 (MQ=255)
tCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTACTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGaaaaaa > 1:9396572/1‑150 (MQ=255)
cGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGaaaaaa < 2:9394464/149‑1 (MQ=255)
gAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTc < 2:9393418/129‑1 (MQ=255)
aaCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATcg > 2:9396594/1‑150 (MQ=255)
aCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATcgc < 2:9394748/150‑1 (MQ=255)
ccccGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGaaaaaaac > 1:9396617/1‑144 (MQ=255)
cccGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATg > 2:9396631/1‑114 (MQ=255)
ccGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGt < 2:9393277/150‑1 (MQ=255)
aTACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTa < 2:9394363/150‑1 (MQ=255)
tACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATGTAGGGAAATCATGACCTGAGGTCAACAAAcg > 2:9396669/1‑126 (MQ=255)
aCGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTAt > 1:9396676/1‑149 (MQ=255)
tGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAAGcg > 1:9396709/1‑136 (MQ=255)
cGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACtt < 1:9393909/150‑1 (MQ=255)
cGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACtt > 2:9396730/1‑150 (MQ=255)
tataCACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTtca < 2:9393821/150‑1 (MQ=255)
tataCACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTtc > 1:9396746/1‑149 (MQ=255)
taCACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTtcaat < 1:9394580/150‑1 (MQ=255)
taCACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTtcaat < 1:9394638/150‑1 (MQ=255)
acacacTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATcgcgcat > 2:9396772/1‑131 (MQ=255)
cacacTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTtcaatca < 2:9395683/150‑1 (MQ=255)
cacTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTcaatcaat > 1:9396784/1‑150 (MQ=255)
ctgtCCAGGCGTGCTCCTTCAGCCACTCCGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAAtg < 1:9394866/146‑1 (MQ=255)
cTTTCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAAtgt < 2:9394667/150‑1 (MQ=255)
tCCAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAAtgtg < 2:9393704/148‑1 (MQ=255)
ccAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATNGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAAtgtgtg < 1:9394783/149‑1 (MQ=255)
cAGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTgg < 2:9394301/149‑1 (MQ=255)
cggCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTtcaatc < 2:9394982/138‑1 (MQ=255)
aGGCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGtt > 2:9396818/1‑150 (MQ=255)
ggCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGttt < 1:9394988/150‑1 (MQ=255)
ggCGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGttt < 2:9395148/150‑1 (MQ=255)
ccatGCTCCTTCAGCCACTCAGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGTGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCa < 1:9395076/124‑1 (MQ=255)
cGTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGtttt > 1:9396834/1‑149 (MQ=255)
gTGCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTtaa < 1:9395818/150‑1 (MQ=255)
gCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTtaat > 2:9396857/1‑149 (MQ=255)
gCTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTtaat < 2:9394851/149‑1 (MQ=255)
cTCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTtaataa < 1:9394292/150‑1 (MQ=255)
tCCTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAg > 1:9396874/1‑150 (MQ=255)
cTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAg < 1:9395391/148‑1 (MQ=255)
cTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAg < 2:9395380/148‑1 (MQ=255)
cTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAg < 1:9394154/148‑1 (MQ=255)
cTTCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAg < 1:9394073/148‑1 (MQ=255)
tCAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGa > 1:9396908/1‑149 (MQ=255)
cAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGaaa > 2:9396918/1‑150 (MQ=255)
cAGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGaa < 1:9395209/149‑1 (MQ=255)
aGCCACTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAAt < 1:9394713/150‑1 (MQ=255)
aCTCGGGCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGc > 1:9396943/1‑150 (MQ=255)
|
CTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTT > NC_000913/1097496‑1097789
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
