Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F13 I1 R1
|
21 |
2440.9 |
80198605 |
99.5% |
79797611 |
141.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,206,963 |
G→A |
P167P (CCG→CCA) |
ttdA → |
L(+)‑tartrate dehydratase subunit alpha |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,206,963 | 0 | G | A | 99.1%
| 10497.7
/ 33.7
| 2360 | P167P (CCG→CCA) | ttdA | L(+)‑tartrate dehydratase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base G (11/11); new base A (1171/1164); total (1182/1178) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 |
Only 100 of 2361 total aligned reads displayed.
GACGAAGTAAACACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCGTCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAGCCATTTTGCGC > NC_000913/3206817‑3207110
|
gAAGTAAACACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAg > 2:27135451/1‑148 (MQ=255)
aaGTAAACACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAg > 1:27135467/1‑150 (MQ=255)
aGTAAACACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAgg < 1:27133473/150‑1 (MQ=255)
gTAAACACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGc < 2:27132175/150‑1 (MQ=255)
aaCACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTa < 1:27133629/149‑1 (MQ=255)
aaCACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTa < 2:27133596/149‑1 (MQ=255)
cacCGGCAAATATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGa < 2:27133855/150‑1 (MQ=255)
ggCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTAc < 2:27133949/144‑1 (MQ=255)
ggCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGc < 1:27132893/150‑1 (MQ=255)
ggCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGc < 2:27134128/150‑1 (MQ=255)
gCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGc > 2:27135563/1‑149 (MQ=255)
gCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCg < 1:27134075/150‑1 (MQ=255)
aaaaaTACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCgtg > 1:27135578/1‑150 (MQ=255)
aaTACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGGGTTAATGCCATCAGa > 2:27135614/1‑131 (MQ=255)
tACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGaa < 1:27134820/150‑1 (MQ=255)
aCCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGaaa > 1:27135633/1‑150 (MQ=255)
ccGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGaaa < 1:27132162/149‑1 (MQ=255)
cGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAAt > 2:27135660/1‑149 (MQ=255)
gTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTCGTGAAATTCg < 1:27133786/150‑1 (MQ=255)
tAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGt < 2:27133781/150‑1 (MQ=255)
cggcgTACCGTGGGTCACGTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCt < 2:27134421/149‑1 (MQ=255)
cggcgTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCtt > 2:27135697/1‑150 (MQ=255)
cggcgTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCtt > 1:27135699/1‑150 (MQ=255)
gcgTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTc < 2:27134192/143‑1 (MQ=255)
gcgTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCg < 2:27133152/150‑1 (MQ=255)
gcgTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCg < 2:27134292/150‑1 (MQ=255)
gTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGa > 1:27135740/1‑149 (MQ=255)
tACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGaa > 2:27135757/1‑149 (MQ=255)
aCCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGaaa < 2:27133392/149‑1 (MQ=255)
ccGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGaaaa > 1:27135784/1‑149 (MQ=255)
cGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAata < 1:27133931/150‑1 (MQ=255)
tGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCgt > 2:27135811/1‑125 (MQ=255)
tCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCa < 1:27133706/150‑1 (MQ=255)
tCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCa > 1:27135832/1‑150 (MQ=255)
cACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTc < 1:27134007/130‑1 (MQ=255)
ccTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCAc > 2:27135857/1‑148 (MQ=255)
cTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCt < 1:27132498/150‑1 (MQ=255)
tGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCt > 1:27135870/1‑149 (MQ=255)
gACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGcc < 2:27133710/150‑1 (MQ=255)
tcatcCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGt > 1:27135913/1‑148 (MQ=255)
tcatcCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTaa < 1:27134540/150‑1 (MQ=255)
atcCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTaaa < 2:27132451/149‑1 (MQ=255)
atcCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAAc < 1:27133260/150‑1 (MQ=255)
cccGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGaa < 2:27134031/123‑1 (MQ=255)
cccGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCg > 2:27135953/1‑142 (MQ=255)
ccGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCt < 2:27134560/150‑1 (MQ=255)
gACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGt < 1:27132699/150‑1 (MQ=255)
gACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGt > 1:27135970/1‑150 (MQ=255)
cAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTcc < 1:27133141/150‑1 (MQ=255)
aaTGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGaaaa > 2:27136010/1‑119 (MQ=255)
aaTGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCa > 1:27136009/1‑150 (MQ=255)
gATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTa > 1:27136052/1‑150 (MQ=255)
tGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTAc > 2:27136075/1‑149 (MQ=255)
cGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACtgg > 1:27136091/1‑150 (MQ=255)
ggAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACtggt < 2:27133005/150‑1 (MQ=255)
aaaTCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACtggtgg > 2:27136122/1‑150 (MQ=255)
aaaTCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACtg < 2:27132774/146‑1 (MQ=255)
cGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGgtgggcgt > 1:27136142/1‑150 (MQ=255)
gAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGc > 2:27136164/1‑125 (MQ=255)
tttACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGgtgggcgtgggc > 1:27136194/1‑149 (MQ=255)
tttACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCa < 1:27134363/150‑1 (MQ=255)
aCATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCg > 2:27136210/1‑108 (MQ=255)
aTGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGgtgggcg < 2:27133490/139‑1 (MQ=255)
cAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCt > 1:27136247/1‑150 (MQ=255)
aGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACGCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTc > 2:27136263/1‑150 (MQ=255)
cggcggcTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGt < 1:27133400/150‑1 (MQ=255)
cggcggcTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGt < 1:27134443/150‑1 (MQ=255)
ggcggcTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCGTCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTg < 1:14673225/150‑1 (MQ=255)
ggcggcTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTg > 1:27136281/1‑150 (MQ=255)
ggcTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGgtgggcgtg > 2:27136324/1‑129 (MQ=255)
ggcTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCCCCTCGGTGGa > 1:27136318/1‑149 (MQ=255)
tGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAAcc > 1:27136361/1‑150 (MQ=255)
cACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAAccg < 1:27134189/149‑1 (MQ=255)
cACGCTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCCCGGGGGAAAccgc > 2:27136375/1‑150 (MQ=255)
cACGCTACCGGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAAcc < 1:27133564/148‑1 (MQ=255)
cTACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAAccgccgcc < 2:27135511/150‑1 (MQ=255)
tACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGc > 2:27136417/1‑127 (MQ=255)
tACCTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAAccgccgccg > 1:27136412/1‑150 (MQ=255)
ccTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAAcc < 2:27133254/141‑1 (MQ=255)
ccTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGt < 1:27134973/149‑1 (MQ=255)
ccTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTa < 1:27135521/150‑1 (MQ=255)
cTGGCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGa < 2:27135913/136‑1 (MQ=255)
tGGCCGCTCGAAAGTGTTAATGCCCTCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGt < 2:27134691/147‑1 (MQ=255)
ggCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTActc > 2:27136453/1‑150 (MQ=255)
gCCGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTActct > 1:27136468/1‑150 (MQ=255)
ccGCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACtctc < 1:27134726/150‑1 (MQ=255)
gCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAAccgccgcc > 2:27136512/1‑140 (MQ=255)
gCTCGAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTcgc > 1:27136508/1‑150 (MQ=255)
gAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTa > 2:27136554/1‑149 (MQ=255)
gAAAGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTa > 1:27136561/1‑149 (MQ=255)
aaGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTa > 2:27136591/1‑147 (MQ=255)
aaGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAg < 2:27135037/150‑1 (MQ=255)
aaGTGTTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAg < 1:27133877/150‑1 (MQ=255)
gtgtTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAGcc < 1:27135245/150‑1 (MQ=255)
tgtTAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAGCCa > 1:27136618/1‑150 (MQ=255)
ttAATGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACtg > 2:27136638/1‑90 (MQ=255)
tAATGCCATCAGAAGGCTACGAAGGCGTAGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTNGGTGGAAACCGCCGCCGTACTCTCGCGTa < 1:27134612/141‑1 (MQ=255)
aaTGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAGCCAttt < 1:27134273/149‑1 (MQ=255)
tGCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAGCCATTTTgc > 1:27136666/1‑150 (MQ=255)
gCCATCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTActct < 2:27134832/131‑1 (MQ=255)
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GACGAAGTAAACACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCGTCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAGCCATTTTGCGC > NC_000913/3206817‑3207110
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
