Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F13 I1 R1
|
21 |
2440.9 |
80198605 |
99.5% |
79797611 |
141.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,238,249 |
C→T |
I313I (ATC→ATT) |
ygjR → |
putative oxidoreductase YgjR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,238,249 | 0 | C | T | 98.8%
| 10249.4
/ 42.7
| 2285 | I313I (ATC→ATT) | ygjR | putative oxidoreductase YgjR |
| Reads supporting (aligned to +/- strand): ref base C (10/18); new base T (922/1332); total (932/1353) |
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 2347 total aligned reads displayed.
GCAGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTG > NC_000913/3238101‑3238395
|
aGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATtcgc > 1:27410037/1‑150 (MQ=255)
cAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTcgccgc < 1:27406460/150‑1 (MQ=255)
cAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTcgccgc > 2:27410063/1‑150 (MQ=255)
aaaTGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTcgccgc > 1:27410084/1‑149 (MQ=255)
aTGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAg < 2:27407436/150‑1 (MQ=255)
ggATCTCACCCAGCCGCAGCATATTAATACCATGTTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGTGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTgg > 1:27410128/1‑150 (MQ=255)
aTCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTggg > 2:27410133/1‑149 (MQ=255)
ccAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGAtttt > 2:27410194/1‑150 (MQ=255)
ccAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGCTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATtcgcc < 2:27407979/131‑1 (MQ=255)
cAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGAttttt > 1:27410206/1‑150 (MQ=255)
gCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTcc < 1:27408799/150‑1 (MQ=255)
gcagcaTATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTcgccgc > 2:27410257/1‑127 (MQ=255)
gcagcaTATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCgg > 1:27410249/1‑149 (MQ=255)
caTATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGa > 1:27410292/1‑149 (MQ=255)
atatTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATa < 1:27407969/150‑1 (MQ=255)
tatTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAg < 2:27407575/150‑1 (MQ=255)
tatTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAg > 2:27410312/1‑150 (MQ=255)
ttAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc < 2:27408239/149‑1 (MQ=255)
aaTACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGt < 1:27408086/149‑1 (MQ=255)
aTACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTg > 2:27410348/1‑123 (MQ=255)
tACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTaaa < 1:27409157/150‑1 (MQ=255)
tACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTaa > 1:27410353/1‑149 (MQ=255)
ccATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTaaaa < 1:27405439/149‑1 (MQ=255)
ccATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTaaaa < 1:27408152/149‑1 (MQ=255)
cATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAAc < 2:27407697/149‑1 (MQ=255)
cATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACt < 1:27409278/150‑1 (MQ=255)
aTGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACta < 2:27408887/150‑1 (MQ=255)
aTGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCAGCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGa < 2:27406012/115‑1 (MQ=255)
tGCTGTACGAAGCAGAGCTGTTCGCTACCCTGGTGGGTGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCAGCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTg < 2:27408650/122‑1 (MQ=255)
gCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATtcgccg > 2:27410394/1‑108 (MQ=255)
ctctACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATaa < 1:27407663/150‑1 (MQ=255)
ctctACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGGCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATaa > 1:27410404/1‑150 (MQ=255)
tACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAAt < 2:27408400/148‑1 (MQ=255)
aCGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGc > 2:27410446/1‑150 (MQ=255)
aCGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGc > 1:27410450/1‑150 (MQ=255)
cGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTg < 1:27408218/148‑1 (MQ=255)
cGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGcc < 1:27407890/150‑1 (MQ=255)
cGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGcc < 2:27408312/150‑1 (MQ=255)
gAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc < 1:27408612/132‑1 (MQ=255)
gAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCACCAGACTggg > 2:27410489/1‑111 (MQ=255)
aaGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCaa < 2:27408515/150‑1 (MQ=255)
aGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCa > 1:27410506/1‑148 (MQ=255)
agagCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTa < 1:27407777/150‑1 (MQ=255)
agagCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTa < 1:27406909/150‑1 (MQ=255)
agagCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTa < 1:27408864/150‑1 (MQ=255)
gagCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGCTTTTTCCGGCAGATAg > 2:27410531/1‑125 (MQ=255)
gTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAg > 1:27410565/1‑150 (MQ=255)
ttCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAgt > 2:27410572/1‑150 (MQ=255)
tACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTaa > 1:27410609/1‑149 (MQ=255)
aCCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTaa > 2:27410625/1‑148 (MQ=255)
cccTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTaaaa < 2:27408724/149‑1 (MQ=255)
cccTGGTGGATGAGCAGCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTaaa < 2:27407247/148‑1 (MQ=255)
ccTTGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTaaaa < 2:27406998/148‑1 (MQ=255)
ccTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAgg < 2:27409873/150‑1 (MQ=255)
cTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGt < 2:27407920/150‑1 (MQ=255)
tggtggATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGt > 1:27410656/1‑149 (MQ=255)
gtggATGAGCATCTGGTGGATCAGCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCa < 2:27408143/126‑1 (MQ=255)
tggATGAGCATCTGGTGGTTCATCCAGGGCTGGCGGTCAGTCGCATCACCTCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATGGCCAAAGt > 2:27410678/1‑129 (MQ=255)
tggATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGt < 1:27409095/150‑1 (MQ=255)
gaaTGAGCATCTGTTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAAt < 2:27408045/117‑1 (MQ=255)
gATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGAATCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTa < 1:27408946/149‑1 (MQ=255)
aTGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTaa > 1:27410695/1‑149 (MQ=255)
tGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACa < 1:27407295/150‑1 (MQ=255)
tGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACa < 2:27409080/150‑1 (MQ=255)
cATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGAcc < 1:27409018/150‑1 (MQ=255)
cATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGAcc < 2:27408456/150‑1 (MQ=255)
cATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGAc > 2:27410727/1‑149 (MQ=255)
cATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGAc < 2:27409224/149‑1 (MQ=255)
aTCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCa < 1:27408547/150‑1 (MQ=255)
tggtggATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCAtt > 1:27410746/1‑149 (MQ=255)
gtggATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGa < 1:27408483/149‑1 (MQ=255)
gtggATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGa < 2:27408995/149‑1 (MQ=255)
tggATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTTTGTAACAGACCATTGACt < 2:27407785/150‑1 (MQ=255)
atcatcCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGc < 1:27408396/150‑1 (MQ=255)
atcatcCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGAGAGCGTAAAACTATAATTGCCAAAGTAAAACAGGGTaaaa > 2:27410774/1‑125 (MQ=255)
atcCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTg > 1:27410789/1‑149 (MQ=255)
atcCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGa < 1:27408279/150‑1 (MQ=255)
cAGGGCCGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAAt < 1:27410162/149‑1 (MQ=255)
aGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATgg > 2:27410815/1‑150 (MQ=255)
gCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCt > 1:27410839/1‑150 (MQ=255)
ggTCAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGGCATa > 2:27410869/1‑150 (MQ=255)
cAGTCGCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCt > 1:27410881/1‑141 (MQ=255)
gCATCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGtt < 1:27408729/149‑1 (MQ=255)
aTCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTAcc > 2:27410918/1‑150 (MQ=255)
tCACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCt < 2:27409433/150‑1 (MQ=255)
cACCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTg > 1:27410927/1‑150 (MQ=255)
aCCGCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGc < 1:27407421/150‑1 (MQ=255)
gCCAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCaaa < 1:27407538/150‑1 (MQ=255)
cAAACTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGAGCATTGACTgg > 2:27410964/1‑115 (MQ=255)
aaaCTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAggg < 1:27407158/150‑1 (MQ=255)
aaCTGCTGACCGAGATTCGCCGCCAGACTGGGGTNATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAgggg < 2:27408784/150‑1 (MQ=255)
aaCTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGt < 2:27406744/96‑1 (MQ=255)
aCTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAggg > 1:27410983/1‑148 (MQ=255)
aCTGCTGACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGa < 2:27409312/150‑1 (MQ=255)
tgctgACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCg > 2:27410999/1‑41 (MQ=255)
ctgACCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGt < 1:27409652/148‑1 (MQ=255)
aCCGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACtt < 1:27409457/150‑1 (MQ=255)
cGAGATTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCa > 1:27411029/1‑150 (MQ=255)
gagaTTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCAt < 1:27408335/150‑1 (MQ=255)
gaTTCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTc < 2:27408574/110‑1 (MQ=255)
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GCAGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTG > NC_000913/3238101‑3238395
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
