Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F13 I1 R1
|
18 |
2625.4 |
86379875 |
99.4% |
85861595 |
141.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,503,951 |
T→C |
T179A (ACT→GCT) |
fryA ← |
putative PTS multiphosphoryl transfer protein FryA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,503,951 | 0 | T | C | 98.4%
| 8962.1
/ 68.8
| 2186 | T179A (ACT→GCT) | fryA | putative PTS multiphosphoryl transfer protein FryA |
| Reads supporting (aligned to +/- strand): ref base T (20/14); new base C (1167/984); total (1187/999) |
| Fisher's exact test for biased strand distribution p-value = 7.29e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 2243 total aligned reads displayed.
CTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGTTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTGTAACAGGGTCAGCG > NC_000913/2503803‑2504097
|
gcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCTTGAATCAGCGACAAATGGGCGCTGAGGATAGctt < 1:22079553/148‑1 (MQ=255)
gagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGc < 2:22080464/149‑1 (MQ=255)
agaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCt > 2:22082453/1‑150 (MQ=255)
aggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAgctttgcttt > 1:22082475/1‑150 (MQ=255)
cagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGTTTTGCTTTCGc < 2:22080761/150‑1 (MQ=255)
cagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGc < 1:22079181/150‑1 (MQ=255)
cagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGc < 1:22080061/150‑1 (MQ=255)
aaaGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCg > 2:22082521/1‑149 (MQ=255)
aaaGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGt < 2:22081411/150‑1 (MQ=255)
aaGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGt > 1:22082531/1‑149 (MQ=255)
gTTTGGCGCAAACCTGCTCCTTATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTg < 2:22078413/137‑1 (MQ=255)
ggCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGtcacgct < 2:22080339/149‑1 (MQ=255)
gcgcAAACCTGCTCCATATTGCCGATGATCGCCGCCCCCAGCCCCTGGTGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGtcacgct < 1:22080373/148‑1 (MQ=255)
cgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGtcacgctcac > 1:22082575/1‑150 (MQ=255)
cgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGtcacgctca > 2:22082580/1‑149 (MQ=255)
gcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGtcacgctcacg < 1:22080166/150‑1 (MQ=255)
cAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGtcacgctcacgc < 1:22081127/150‑1 (MQ=255)
aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGtcacgctcacgc > 2:22082613/1‑149 (MQ=255)
cTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAAtt < 2:22080519/149‑1 (MQ=255)
cTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTg > 1:22082652/1‑150 (MQ=255)
tGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGc > 2:22082661/1‑150 (MQ=255)
cTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTg < 2:22079954/150‑1 (MQ=255)
cTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTg < 1:22080460/150‑1 (MQ=255)
atatTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGtt > 2:22082699/1‑149 (MQ=255)
atatTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGtt > 1:22082703/1‑149 (MQ=255)
agatTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAATTTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGtcac < 1:22081468/128‑1 (MQ=255)
tatTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCa < 1:22080567/150‑1 (MQ=255)
tatTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCa < 2:22081496/150‑1 (MQ=255)
gCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTg > 1:22082747/1‑150 (MQ=255)
gCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTg > 2:22082743/1‑150 (MQ=255)
atgctCGCCGCCCCCCGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCg < 2:22081231/150‑1 (MQ=255)
tgatCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAANTGCTGGTTCAGTTGCTCgg < 2:22082154/150‑1 (MQ=255)
gatCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCgg > 1:22082792/1‑149 (MQ=255)
atCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGc < 1:22080769/149‑1 (MQ=255)
tCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGc > 2:22082798/1‑148 (MQ=255)
ccgccCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCg > 1:22082833/1‑150 (MQ=255)
gccCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCGGGTTCAGt > 2:22082855/1‑135 (MQ=255)
cccccAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGt > 1:22082872/1‑108 (MQ=255)
cccccAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTg < 1:22081565/150‑1 (MQ=255)
cAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCa < 2:22080093/128‑1 (MQ=255)
aGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAgg > 2:22082905/1‑150 (MQ=255)
gCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGc > 1:22082918/1‑150 (MQ=255)
ccccTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCt < 1:22080671/150‑1 (MQ=255)
ccTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCgg < 2:22080233/132‑1 (MQ=255)
ccTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGc < 2:22079271/133‑1 (MQ=255)
tGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGTTCGGCAAGCGTTGCCAGGCTGTGc > 2:22082956/1‑150 (MQ=255)
gATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCt > 1:22082967/1‑150 (MQ=255)
cTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAg < 2:22080833/150‑1 (MQ=255)
cTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAg > 2:22082995/1‑150 (MQ=255)
ttCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGcc > 1:22083029/1‑149 (MQ=255)
ttCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCCCACGCAATTGCTGGTTc > 2:22083029/1‑112 (MQ=255)
gTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGt > 2:22083070/1‑149 (MQ=255)
tcatcaGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTg > 1:22083080/1‑149 (MQ=255)
atcaGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGa < 2:22080904/149‑1 (MQ=255)
caGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGcc > 2:22083114/1‑140 (MQ=255)
gCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCt < 2:22079820/148‑1 (MQ=255)
cGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTgc < 1:22081958/150‑1 (MQ=255)
cGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCCTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTgc > 1:22083132/1‑150 (MQ=255)
gACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTgc > 2:22083153/1‑149 (MQ=255)
ggATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCa < 1:22081320/149‑1 (MQ=255)
ggATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCAc > 1:22083181/1‑150 (MQ=255)
gATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAggt > 2:22083199/1‑96 (MQ=255)
tatTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTgg > 1:22083221/1‑150 (MQ=255)
ttGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGc < 2:22081323/149‑1 (MQ=255)
gCCTGCAAATTCATCATCCTGAATCAGCGACATATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCggg > 2:22083245/1‑150 (MQ=255)
gCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCg < 2:22080600/104‑1 (MQ=255)
tGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGAt > 1:22083276/1‑150 (MQ=255)
cAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTg > 2:22083284/1‑150 (MQ=255)
aaaTTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGc > 1:15597425/1‑150 (MQ=255)
aaaTTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGc < 1:22081719/150‑1 (MQ=255)
ttCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGccc > 1:22083325/1‑149 (MQ=255)
ttCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCg < 1:22081223/150‑1 (MQ=255)
tcatcaTCCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGa > 2:22083332/1‑150 (MQ=255)
atcatcCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGAt > 1:22083363/1‑149 (MQ=255)
catcCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCACGCTGTGCTCCAGCCGGGTGGAATCTTGCGCa > 2:22083382/1‑128 (MQ=255)
tcCTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACt > 1:22083408/1‑149 (MQ=255)
cTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTc < 2:22080690/150‑1 (MQ=255)
cTGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTCCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGt < 1:22079871/149‑1 (MQ=255)
tGAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATACCTGTc > 2:22083429/1‑149 (MQ=255)
gAATCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTc > 1:22083444/1‑148 (MQ=255)
aaTCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCg < 1:22080862/148‑1 (MQ=255)
aaTCAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAg < 2:22081632/150‑1 (MQ=255)
cAGCGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCCGGCTGTGCTCCAGCCCGGTGGAAGCCTGCGCACTGGCg > 2:22083474/1‑124 (MQ=255)
cGACAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTc > 1:22083494/1‑150 (MQ=255)
aCAAATGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGc < 1:22081039/150‑1 (MQ=255)
aaaTGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGcgt > 2:22083527/1‑148 (MQ=255)
aaaTGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCtt > 1:22083531/1‑150 (MQ=255)
aTGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCttt > 2:22083559/1‑149 (MQ=255)
aTGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTg < 1:22080256/150‑1 (MQ=255)
tGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGc < 2:22079521/65‑1 (MQ=255)
tGGGCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAgg < 2:22081008/138‑1 (MQ=255)
ggCGCTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTGTaa > 1:22083587/1‑150 (MQ=255)
gcTGAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTGTAACAg > 2:22083603/1‑150 (MQ=255)
cTGAGGATAGCTTTGCTTTCGCCGTCACGCGCACGCAATTGCTGGGTCAGTTGCTCGGCAAGCGTTGCCAGGCt > 1:22083637/1‑74 (MQ=255)
gAGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCggg > 2:22083649/1‑108 (MQ=255)
aGGATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTGTAACAGGGt < 2:22081775/149‑1 (MQ=255)
gATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTGTAACAGGGTCAg < 1:22082335/150‑1 (MQ=255)
gATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTGTAACAGGGTCAg < 2:22081139/150‑1 (MQ=255)
gATAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTGTAACAGGGTCAg > 1:22083672/1‑150 (MQ=255)
aTAGCTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTGTAACAGGGTCAGc < 1:22080949/150‑1 (MQ=255)
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CTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGTTTTGCTTTCGCCGTCACGCTCACGCAATTGCTGGTTCAGTTGCTCGGCAAGCGTTGCCAGGCTGTGCTCCAGCCGGGTGGAATCTTGCGCACTGGCGGGGATTGCCCGATAACTGTCGAGGCTGTCGCTTTGTAACAGGGTCAGCG > NC_000913/2503803‑2504097
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
