Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F13 I1 R1
|
17 |
935.6 |
30504812 |
99.2% |
30260773 |
142.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,100,214 |
T→C |
N352S (AAC→AGC) |
gnd ← |
6‑phosphogluconate dehydrogenase, decarboxylating |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,100,214 | 0 | T | C | 99.9%
| 3188.4
/ NA
| 773 | N352S (AAC→AGC) | gnd | 6‑phosphogluconate dehydrogenase, decarboxylating |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (404/368); minor base A (1/0); total (405/368) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 773 total aligned reads displayed.
GTAGTCATCGGCAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGTTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGCTTGCGGACCAGA > NC_000913/2100069‑2100359
|
gTAGTCATCGGCAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAg < 1:6433823/150‑1 (MQ=255)
gTCATCGGCAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATc < 1:6434245/150‑1 (MQ=255)
tCATCGGCAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATcc < 1:6434409/150‑1 (MQ=255)
tCATCGGCAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATcc < 2:6434870/150‑1 (MQ=255)
cATCGGCAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATcc > 2:6435463/1‑149 (MQ=255)
cATCGGCAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATcc > 1:6435461/1‑149 (MQ=255)
gCAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTg < 2:6434942/150‑1 (MQ=255)
cAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTCCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTg > 1:6435479/1‑149 (MQ=255)
tttGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTAct > 1:6435487/1‑150 (MQ=255)
ttGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTActc > 2:6435488/1‑150 (MQ=255)
cTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTc < 1:6434939/150‑1 (MQ=255)
cTTGAACTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATATTCAGCATAAGCATCGGTGATTTTCTGCAGGAACTGCTCACGGATCCTGCAGCCAGCACGGAAAATCTTCGCGATTTGGCCGTAGCTCAGATCCCAGTTGTACTCTTc < 1:6435124/150‑1 (MQ=255)
aGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGacg > 1:6435504/1‑150 (MQ=255)
aGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGacg > 2:6435502/1‑150 (MQ=255)
aCGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGacgca > 1:6435517/1‑149 (MQ=255)
aGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGacgcagcacg < 2:6434817/150‑1 (MQ=255)
aGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGCTGTACTCTTCAGacgcagcacg > 1:6435527/1‑150 (MQ=255)
gCCATCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGacgcagcac < 2:6434284/148‑1 (MQ=255)
ccAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGacgcagcacgc < 2:6434500/149‑1 (MQ=255)
aGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGacgcagcacgcagc < 1:6434873/150‑1 (MQ=255)
gCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCt > 2:6435537/1‑150 (MQ=255)
cAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTg < 1:6434469/150‑1 (MQ=255)
aaCAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCt > 1:6435543/1‑148 (MQ=255)
aCAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTgag < 1:6435098/150‑1 (MQ=255)
gTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTgagag > 2:6435555/1‑148 (MQ=255)
gTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGaa < 1:6434691/150‑1 (MQ=255)
gTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGaa < 2:6434695/150‑1 (MQ=255)
tAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGc > 1:6435563/1‑150 (MQ=255)
aGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTgagaga < 2:6434779/146‑1 (MQ=255)
aGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGc < 2:6434964/149‑1 (MQ=255)
cGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTATTCAGACGCAGCACGCAGCTGAGAGAAGCCCt > 2:6435570/1‑150 (MQ=255)
gATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCAGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCt < 2:6434662/149‑1 (MQ=255)
aTCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTgg > 2:6435579/1‑150 (MQ=255)
cTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGc > 1:6435589/1‑150 (MQ=255)
cTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGc > 2:6435588/1‑150 (MQ=255)
tgGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTggg < 2:6435067/146‑1 (MQ=255)
tgGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTg < 1:6434627/144‑1 (MQ=255)
ggATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGt > 2:6435600/1‑148 (MQ=255)
gATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTaa < 2:6434714/149‑1 (MQ=255)
ttttCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGa > 1:6435608/1‑149 (MQ=255)
tttCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGaa > 2:6435614/1‑149 (MQ=255)
cATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGAttt < 2:6434607/150‑1 (MQ=255)
cATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGAttt > 1:6435627/1‑150 (MQ=255)
cATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGAttt > 2:6435626/1‑150 (MQ=255)
tAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACg > 1:6435639/1‑144 (MQ=255)
gCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGccc < 1:6434906/150‑1 (MQ=255)
cATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGcc > 2:6435645/1‑148 (MQ=255)
ggTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATa > 1:6435655/1‑150 (MQ=255)
gTGATTATCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATAc < 1:6434929/150‑1 (MQ=255)
tGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATa > 1:6435666/1‑148 (MQ=255)
gATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGacgcagcacgca < 2:6435086/104‑1 (MQ=255)
gATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAg > 2:6435669/1‑150 (MQ=255)
aTTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAgc < 1:6435369/150‑1 (MQ=255)
aTTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAgc < 1:6435055/150‑1 (MQ=255)
aTTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAgc < 1:6434850/150‑1 (MQ=255)
aTTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAgc < 1:6434578/150‑1 (MQ=255)
ttCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCa > 1:6435676/1‑150 (MQ=255)
cAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCacgac > 2:6435691/1‑149 (MQ=255)
cAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCacgac > 1:6435689/1‑149 (MQ=255)
aGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTATTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCacgacg > 2:6435700/1‑149 (MQ=255)
ggAACTGCGGACGGATGATNCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGaa > 1:6435707/1‑150 (MQ=255)
gAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAAc < 1:6434749/150‑1 (MQ=255)
gAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAAc < 2:6434399/150‑1 (MQ=255)
aCTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACtt > 1:6435718/1‑150 (MQ=255)
tGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACtttt > 2:6435726/1‑150 (MQ=255)
tGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACttt < 2:6434989/149‑1 (MQ=255)
gcgcACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTGCAGACGCATCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCacgacg < 1:6434519/142‑1 (MQ=255)
gcACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCg < 2:6434833/105‑1 (MQ=255)
gcACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTc > 1:6435737/1‑149 (MQ=255)
cACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTc < 2:6435024/148‑1 (MQ=255)
cACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGa > 2:6435739/1‑150 (MQ=255)
ggATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACg < 2:6434893/110‑1 (MQ=255)
ggATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGcg > 2:6435754/1‑117 (MQ=255)
ggATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATg > 1:6435751/1‑149 (MQ=255)
atgatgCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAAc < 2:6434731/137‑1 (MQ=255)
atgCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCt < 2:6435130/91‑1 (MQ=255)
agccagcACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCt < 2:6435239/150‑1 (MQ=255)
agccagcACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCt > 1:6435769/1‑150 (MQ=255)
agccagcACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCt > 2:6435767/1‑150 (MQ=255)
gccagcACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCtt < 1:6435175/150‑1 (MQ=255)
agcACGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTc > 2:6435779/1‑150 (MQ=255)
aCGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGcc < 1:6435018/150‑1 (MQ=255)
cGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGTTACAGCGCACGACGAACTTTTTc < 2:6433755/128‑1 (MQ=255)
cGGAAAATCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGcc > 1:6435789/1‑149 (MQ=255)
aaaaTCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCctgct > 2:6435795/1‑150 (MQ=255)
aaTCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTgctgg > 1:6435801/1‑150 (MQ=255)
aTCTTCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTgctggc < 1:6434781/150‑1 (MQ=255)
tCGCGATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCtgtg > 1:6435814/1‑150 (MQ=255)
cgcgATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTgctggct < 1:6434981/146‑1 (MQ=255)
cgcgATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCtgt > 2:6435815/1‑148 (MQ=255)
cgATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGTCGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGANTTTGCCCAGATACAGCGCACGACGAACGTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGc < 1:6435202/148‑1 (MQ=255)
cgATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGCtt < 2:6435519/150‑1 (MQ=255)
cgATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGCtt < 1:6434806/150‑1 (MQ=255)
gATTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGCTTg > 1:6435826/1‑150 (MQ=255)
aTTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGCTTGc < 2:6435337/150‑1 (MQ=255)
aTTTCGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAAATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGGCGCCTGCTGGCTGTGCTTGc > 2:6435833/1‑150 (MQ=255)
cGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGaaa > 2:6435848/1‑72 (MQ=255)
cGCCGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGCTTGCGGAc > 1:6435843/1‑150 (MQ=255)
cGTAGCTCAGATCCCTGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGNTTGCGGACCag < 1:6435150/150‑1 (MQ=255)
cGTAGCTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGCTTGCGGAc > 1:6435857/1‑147 (MQ=255)
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GTAGTCATCGGCAATTTGCTTGAAGTACGGAGCCAGCAACAGGTTAGCGATCTGTGGATTTTCGGCATAAGCATCGGTGATTTTCTGCAGGAACTGCGCACGGATGATGCAGCCAGCACGGAAAATCTTCGCGATTTCGCCGTAGTTCAGATCCCAGTTGTACTCTTCAGACGCAGCACGCAGCTGAGAGAAGCCCTGGGCGTAAGAAACGATTTTGCCCAGATACAGCGCACGACGAACTTTTTCGATGAACTCAGCCTTGTCGCCTGCTGGCTGTGCTTGCGGACCAGA > NC_000913/2100069‑2100359
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
