Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F13 I1 R1
|
20 |
580.9 |
19806870 |
98.8% |
19569187 |
140.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,293,765 |
T→C |
G380G (GGA→GGG) |
ccmF ← |
holocytochrome c synthetase membrane subunit CcmF |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,293,765 | 0 | T | C | 99.4%
| 2129.3
/ ‑1.7
| 499 | G380G (GGA→GGG) | ccmF | holocytochrome c synthetase membrane subunit CcmF |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (226/269); total (227/272) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 527 total aligned reads displayed.
GCGATAATCAATAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGTCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGCGAACTTTGTGTCCACGCGC > NC_000913/2293619‑2293911
|
gCGATAATCAATAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGcccagcccc < 1:4740354/150‑1 (MQ=255)
cGATAATCAATAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGcccagccc > 1:4740770/1‑148 (MQ=255)
aTAATCAATAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGcccagccccagt < 1:4740248/150‑1 (MQ=255)
tAATCAATAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGtt < 1:4740157/150‑1 (MQ=255)
aTCAATAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTg < 2:4740255/149‑1 (MQ=255)
aTCAATAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGc < 1:4740297/150‑1 (MQ=255)
aTCAATAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGc > 1:4740778/1‑150 (MQ=255)
aaTAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTa < 1:4740016/150‑1 (MQ=255)
tAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCNGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATg > 1:4740787/1‑150 (MQ=255)
aaaTTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATg > 2:4740789/1‑149 (MQ=255)
aaTTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCGAGTTGCTTATGCa < 1:4740316/150‑1 (MQ=255)
aaTTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCa > 1:4740795/1‑150 (MQ=255)
aaTTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCa < 2:4740513/150‑1 (MQ=255)
tGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAATATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCAcc < 2:4740491/149‑1 (MQ=255)
gCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCa < 1:4740546/149‑1 (MQ=255)
ggATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACg < 1:4740413/150‑1 (MQ=255)
ggATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACg < 1:4740363/150‑1 (MQ=255)
gATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACgg > 1:4740807/1‑150 (MQ=255)
gATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACgg > 2:4740807/1‑150 (MQ=255)
tCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGcccagcccca > 2:4740814/1‑129 (MQ=255)
cgcgGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCCCCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCCGTTGCTTATGCAGCAACGGCagcagc > 2:4740825/1‑150 (MQ=255)
gcgGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCg < 1:4740423/150‑1 (MQ=255)
cgGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCCGCAGCGt > 1:4740830/1‑150 (MQ=255)
cGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTccc > 1:4740836/1‑149 (MQ=255)
gATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCTGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCNAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCa < 1:4739928/150‑1 (MQ=255)
aTCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAg < 1:4740400/150‑1 (MQ=255)
tCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGtt > 2:4740843/1‑118 (MQ=255)
tCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGc < 1:4740676/150‑1 (MQ=255)
cccGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGc > 1:4740845/1‑149 (MQ=255)
ccGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCaa > 1:4740853/1‑150 (MQ=255)
ccGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGATTATGCACCAACGGCAGCAGCGTCCCCAGCa < 1:4740196/149‑1 (MQ=255)
gCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAaca < 1:4740108/150‑1 (MQ=255)
gCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAaca < 1:4739591/150‑1 (MQ=255)
cAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAAcaccac > 1:4740862/1‑149 (MQ=255)
cgcACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCNTCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCaa < 2:4740137/140‑1 (MQ=255)
gcACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCa < 1:4740461/150‑1 (MQ=255)
cACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCAt < 1:4740481/150‑1 (MQ=255)
cACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCAt < 1:4740582/150‑1 (MQ=255)
cACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGACCCCAGCAACACCACCAGCAt > 1:4740869/1‑150 (MQ=255)
cACCAAAGGACCGACACCAAGCAGTAGCGCAAACGGCACGATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAAGACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTcc > 2:4740869/1‑131 (MQ=255)
agGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGATGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGc < 2:4740661/150‑1 (MQ=255)
gACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCg > 2:4740879/1‑149 (MQ=255)
gACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGa < 1:4740173/150‑1 (MQ=255)
gACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGa > 1:4740879/1‑150 (MQ=255)
aCCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCAt < 2:4740328/141‑1 (MQ=255)
ccGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGAcc < 1:4740284/150‑1 (MQ=255)
gACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAg < 1:4740434/150‑1 (MQ=255)
acacCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCCATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCCACGGCAGCAGCGTCCCCAGCAACCCCACCAGCATCCCAGCGACCa > 2:4740888/1‑148 (MQ=255)
acacCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGc < 1:4740323/150‑1 (MQ=255)
acCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCaa < 1:4740270/150‑1 (MQ=255)
acCAAGAAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCaa < 2:4740216/150‑1 (MQ=255)
ccAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCa > 1:4740891/1‑148 (MQ=255)
cAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCaaaa < 1:4740224/150‑1 (MQ=255)
tAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGtt > 1:4740902/1‑150 (MQ=255)
tAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGCTGCTTATGCACCACCGGCAGCAGCGt > 2:4740903/1‑105 (MQ=255)
aGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGtt < 2:4740380/149‑1 (MQ=255)
aaaCGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAg > 2:4740914/1‑132 (MQ=255)
aaaCGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTaa > 1:4740912/1‑150 (MQ=255)
aaCGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAAc < 1:4740611/150‑1 (MQ=255)
aCGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTaa < 2:4740774/148‑1 (MQ=255)
ggCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGc < 1:4740508/150‑1 (MQ=255)
cACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCaa < 1:4740343/150‑1 (MQ=255)
aCCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCaaa < 2:4740574/150‑1 (MQ=255)
aCCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCa > 1:4740924/1‑148 (MQ=255)
ccATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCa > 2:4740924/1‑147 (MQ=255)
cATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGa < 2:4740363/150‑1 (MQ=255)
tCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGAtt > 1:4740936/1‑150 (MQ=255)
tCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGAtt > 2:4740934/1‑150 (MQ=255)
aGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTcc > 1:4740941/1‑150 (MQ=255)
cAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCcgc < 2:4740295/150‑1 (MQ=255)
aGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCcgcg < 1:4740076/150‑1 (MQ=255)
gTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCg > 2:4740949/1‑127 (MQ=255)
aaCATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACcac < 2:4740470/150‑1 (MQ=255)
aaCATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACca > 1:4740954/1‑149 (MQ=255)
aaCATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACca < 1:4740569/149‑1 (MQ=255)
aaCATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCCACCAGCAAAACATTGTTCGCTAACAGCaaa < 2:4740190/135‑1 (MQ=255)
aCATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTccc > 2:4740959/1‑141 (MQ=255)
aCATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACcaca < 2:4740447/150‑1 (MQ=255)
cATGGTGTTGAAGAACGGTTCGCCAATCGAGATACTGCCCAGCCCCAGGTGCTTATGCGcc > 2:4740967/1‑61 (MQ=255)
cATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAg > 1:4740966/1‑150 (MQ=255)
aTGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAgc < 1:4740445/150‑1 (MQ=255)
gtgtTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCt < 2:4740426/120‑1 (MQ=255)
gtTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCAtt > 1:4740976/1‑150 (MQ=255)
ttGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCAtt < 1:4740522/149‑1 (MQ=255)
ttGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCAtt < 1:4740385/149‑1 (MQ=255)
ttGAAGAACGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTg < 1:4740655/150‑1 (MQ=255)
aagaaCGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGtt < 1:4740334/149‑1 (MQ=255)
aagaaCGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTGCGCTAACAGCaa > 2:4740980/1‑122 (MQ=255)
agaaCGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTa < 1:4740498/150‑1 (MQ=255)
gaaCGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTAc > 1:4740984/1‑150 (MQ=255)
cGGTTCGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTAcgc > 1:4740991/1‑149 (MQ=255)
ggTTCGCCAATCGAAATACTGCCCACCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCaac > 2:4740993/1‑95 (MQ=255)
cGCCAATCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGc > 1:4741001/1‑150 (MQ=255)
aaTCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGCGAAc < 2:4740280/150‑1 (MQ=255)
aTCGAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGCGaa > 2:4741008/1‑148 (MQ=255)
gAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGCGAACttt < 2:4740532/149‑1 (MQ=255)
gAAATACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGCGAACTTtg > 1:4741011/1‑150 (MQ=255)
aTACTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGCGAACTTTgtgt > 2:4741018/1‑150 (MQ=255)
cTGCCCAGCCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGCGAACTTTGTGTCCa > 1:4741022/1‑150 (MQ=255)
cagccccagtTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGCGAACTTTGTGTCCAcgcgc > 1:4741030/1‑150 (MQ=255)
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GCGATAATCAATAAATTGCGGATCTTACGCGGGCGATCCCGCCCCCAGCGCACCAGAGGACCGACACCAAGCAGTAGCGCAAACGGCACCATCAGCCAGGTAAACATGGTGTTGAAGAACGGTTCGCCAATCGAAATACTGCCCAGTCCCAGTTGCTTATGCACCAACGGCAGCAGCGTCCCCAGCAACACCACCAGCATCGCAGCGACCAGCAAAACATTGTTCGCTAACAGCAAAGATTCCCGCGACCACAGCGCATTGTTTACGCGTGAGCGAACTTTGTGTCCACGCGC > NC_000913/2293619‑2293911
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
