Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F13 I1 R1
|
20 |
580.9 |
19806870 |
98.8% |
19569187 |
140.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,451,917 |
A→G |
F124L (TTC→CTC) |
rplD ← |
50S ribosomal subunit protein L4 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,451,917 | 0 | A | G | 99.0%
| 2490.9
/ 8.6
| 601 | F124L (TTC→CTC) | rplD | 50S ribosomal subunit protein L4 |
| Reads supporting (aligned to +/- strand): ref base A (6/0); new base G (291/304); total (297/304) |
| Fisher's exact test for biased strand distribution p-value = 1.42e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.72e-01 |
Only 100 of 612 total aligned reads displayed.
TTGCATCGCGTACGTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAACTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGCCAGATCGGGC > NC_000913/3451770‑3452063
|
tGCATCGCGTACGTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCtt > 1:7174934/1‑150 (MQ=255)
cATCGCGTACGTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTtc < 1:7174543/149‑1 (MQ=255)
tCGCGTACGTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCg < 1:7174190/150‑1 (MQ=255)
cgTACGTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCtt > 2:7174945/1‑143 (MQ=255)
cgTACGTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACa < 1:7174431/150‑1 (MQ=255)
tACGTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAAc > 1:7174951/1‑150 (MQ=255)
gTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGAt > 1:7174958/1‑150 (MQ=255)
gTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGAt < 2:7174635/150‑1 (MQ=255)
aaCCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCAAGCAGCTCAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGAt > 2:7174963/1‑147 (MQ=255)
aCCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGa < 2:7174696/150‑1 (MQ=255)
ccTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGAc < 1:7174285/150‑1 (MQ=255)
gttGTGCAGGTTGCGCGCAGCCAGGTACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTACACTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTtctc < 2:7174327/134‑1 (MQ=255)
cTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGAc > 1:7174969/1‑149 (MQ=255)
cAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTg < 1:7174675/150‑1 (MQ=255)
aGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGa > 2:7174976/1‑150 (MQ=255)
gcgcAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTAc > 1:7174985/1‑148 (MQ=255)
gcgcAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCa < 1:7173499/150‑1 (MQ=255)
cgcAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAg < 1:7174058/150‑1 (MQ=255)
gcAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAg < 2:7174474/149‑1 (MQ=255)
ccAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCa < 2:7174456/144‑1 (MQ=255)
ccAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCgg < 1:7174569/150‑1 (MQ=255)
ccAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCg < 1:7174530/149‑1 (MQ=255)
ccAAGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCgg < 2:7174606/150‑1 (MQ=255)
cAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCtg > 2:7174997/1‑110 (MQ=255)
cAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGa > 1:7174999/1‑150 (MQ=255)
aGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGa > 1:7175007/1‑149 (MQ=255)
aaCAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAg > 1:7175016/1‑149 (MQ=255)
aCAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGa < 1:7174213/150‑1 (MQ=255)
cAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGAt < 1:7174467/150‑1 (MQ=255)
tttCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCt > 1:7175025/1‑148 (MQ=255)
ttCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGCTCCTGACGTACCAGTTCGGACAGGATGCt > 2:7175024/1‑147 (MQ=255)
ttCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCttt < 1:7174488/149‑1 (MQ=255)
tCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCtttt < 1:7174323/149‑1 (MQ=255)
cggccAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACg < 2:7174132/104‑1 (MQ=255)
gTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGCCAGGATGCTTTTc > 1:7175035/1‑148 (MQ=255)
gTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCa < 2:7174671/149‑1 (MQ=255)
gTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAg < 2:7174620/150‑1 (MQ=255)
ccAGCTCACCGGTGATGATCAGAACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCAGCGCTTCTATAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAgcg > 2:7175039/1‑150 (MQ=255)
aGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAgcgcg < 1:7174745/150‑1 (MQ=255)
tCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGcgccg > 1:7175053/1‑150 (MQ=255)
tCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGcgccg > 2:7175051/1‑150 (MQ=255)
cGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCgg > 1:7175065/1‑149 (MQ=255)
cGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCgg > 2:7175061/1‑149 (MQ=255)
tgatgaTCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACa > 1:7175071/1‑150 (MQ=255)
tgatgaTCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACa < 2:7174806/150‑1 (MQ=255)
atgatCAGCACATCTTCCAGAGCCATGTCTTGCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACAt < 1:7174686/149‑1 (MQ=255)
atCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACatcatc > 1:7175083/1‑150 (MQ=255)
atCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACAtcttc < 1:7174640/150‑1 (MQ=255)
atCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACAcctt > 2:7175082/1‑149 (MQ=255)
tCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAAc < 1:7174355/85‑1 (MQ=255)
tCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACAtcttc < 1:7174707/149‑1 (MQ=255)
gCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGt > 1:7175095/1‑150 (MQ=255)
acaTCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGTCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGAAGTACCAGTTCggc > 2:7175093/1‑109 (MQ=255)
caTCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTaa < 1:7174385/150‑1 (MQ=255)
caTCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTaa < 2:7174368/150‑1 (MQ=255)
tCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACtttt > 1:7175104/1‑150 (MQ=255)
ccAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACttt < 2:7174521/148‑1 (MQ=255)
cAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTg < 1:7174860/150‑1 (MQ=255)
cAGAGCCATGTCTTTCAGTTTCCGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACttttt < 2:7174261/149‑1 (MQ=255)
cgCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGTTCCTGACGTACCAGt < 2:7174442/93‑1 (MQ=255)
gCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGTCAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACt < 2:7174655/149‑1 (MQ=255)
gCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACtg > 1:7175115/1‑150 (MQ=255)
ccATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACtgt < 2:7174988/150‑1 (MQ=255)
cATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTAGCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACtgtg > 2:7175119/1‑150 (MQ=255)
cATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACtgtg > 1:7175121/1‑150 (MQ=255)
gTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTc > 2:7175130/1‑150 (MQ=255)
tCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTcc > 1:7175134/1‑150 (MQ=255)
tCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTc < 1:7174663/149‑1 (MQ=255)
tCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTc < 1:7174511/149‑1 (MQ=255)
tCAGTTTCTGTGCCAGCAGCGTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTg < 2:7174544/148‑1 (MQ=255)
cAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCg < 2:7174757/149‑1 (MQ=255)
cAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCg > 1:7175144/1‑149 (MQ=255)
aGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCgg < 1:7174582/149‑1 (MQ=255)
ttCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGAc > 2:7175147/1‑148 (MQ=255)
cTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGag > 1:7175153/1‑149 (MQ=255)
gCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGagcagc > 1:7175163/1‑149 (MQ=255)
cagcagCTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTg > 2:7175164/1‑135 (MQ=255)
cagcTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAgg > 1:7175175/1‑149 (MQ=255)
gcTTAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCa < 1:7174607/150‑1 (MQ=255)
gcTTAGTTTTCGGCGCTTCTACAGAGAACTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCa > 2:7175176/1‑150 (MQ=255)
ttAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACg > 1:7175188/1‑150 (MQ=255)
ttAGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACg > 2:7175186/1‑150 (MQ=255)
aGTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACg < 1:7174403/148‑1 (MQ=255)
gTTTTCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGcca > 2:7175195/1‑150 (MQ=255)
ttttCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGccac > 1:7175202/1‑150 (MQ=255)
ttgcGGCTCTTCTACAGCGAGCTTCTCGACGACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACAtcttct < 2:7174581/95‑1 (MQ=255)
tCGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGccacca < 2:7174412/149‑1 (MQ=255)
cGGCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAg > 1:7175212/1‑149 (MQ=255)
ggCGCTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGccac > 2:7175213/1‑145 (MQ=255)
gcTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGt < 2:7174557/134‑1 (MQ=255)
gcTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGc > 2:7175221/1‑150 (MQ=255)
cTTCTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGCACGc > 1:7175226/1‑149 (MQ=255)
cTACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGCCa < 1:7174786/148‑1 (MQ=255)
tACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGc > 1:7175238/1‑145 (MQ=255)
tACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGc > 2:7175234/1‑145 (MQ=255)
tACAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGCCAg < 2:7174868/148‑1 (MQ=255)
catagagCTGCTCGACAACGATCAGACGATGCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCCCCAGAACGCCAGATc < 2:7174787/146‑1 (MQ=255)
cAGAGAGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGCCAGAt < 2:7174718/148‑1 (MQ=255)
gagaGCTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGCCAGATCggg > 1:7175248/1‑150 (MQ=255)
agagCTGCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGCCAGATc < 2:7174500/146‑1 (MQ=255)
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TTGCATCGCGTACGTCAACCTTGTGCAGGTTGCGCGCAGCCAGGAACAGGTTTTCGTCCAGCTCACCGGTGATGATCAGCACATCTTCCAGAGCCATGTCTTTCAGTTTCTGTGCCAGCAGCTTAGTTTTCGGCGCTTCTACAGAGAACTTCTCGACAACGATCAGACGATCCTGACGTACCAGTTCGGACAGGATGCTTTTCAGCGCGCCGCGGTACATCTTCTTGTTAACTTTTTGACTGTGGTCCTGCGGACGAGCAGCAAAGGTCACGCCACCAGAACGCCAGATCGGGC > NC_000913/3451770‑3452063
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
