Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F13 I1 R1
|
20 |
580.9 |
19806870 |
98.8% |
19569187 |
140.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,852,713 |
T→C |
E24E (GAA→GAG) |
ilvB ← |
acetohydroxy acid synthase I subunit IlvB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,852,713 | 0 | T | C | 99.4%
| 2806.3
/ 2.1
| 671 | E24E (GAA→GAG) | ilvB | acetohydroxy acid synthase I subunit IlvB |
| Reads supporting (aligned to +/- strand): ref base T (1/3); new base C (343/323); total (345/326) |
| Fisher's exact test for biased strand distribution p-value = 3.61e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
Only 100 of 677 total aligned reads displayed.
GTGCGCGCCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCG > NC_000913/3852567‑3852859
|
tGCGCGCCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCa < 1:8105675/150‑1 (MQ=255)
cgcgcCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAgg < 1:8106007/150‑1 (MQ=255)
cgcCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGa > 1:8106242/1‑149 (MQ=255)
gcCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTCAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACCATCTTAATGCCCTGCTGCTCCAg > 2:8106240/1‑146 (MQ=255)
aTTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGa < 1:8105621/150‑1 (MQ=255)
ttCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGaa > 1:8106255/1‑150 (MQ=255)
cccTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAAc < 1:8104807/149‑1 (MQ=255)
cccTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAAc > 2:8106257/1‑149 (MQ=255)
aGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATaaa > 1:8106272/1‑150 (MQ=255)
aGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATaaa < 1:8105293/150‑1 (MQ=255)
aGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATaa < 2:8105693/149‑1 (MQ=255)
aGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATaa < 1:8105536/149‑1 (MQ=255)
aGCGATAAAGCCCGCGCCCTGNTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATaa < 2:8105529/149‑1 (MQ=255)
gCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAAt < 2:8105882/150‑1 (MQ=255)
aTAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCt > 2:8106274/1‑150 (MQ=255)
tAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTg > 1:8106283/1‑150 (MQ=255)
aaGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTgcg < 2:8105737/150‑1 (MQ=255)
aaGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTg < 2:8105801/148‑1 (MQ=255)
aaGCCCGCGCCCTGTTCATGACGGGCCAGAACATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTgc < 1:8105985/149‑1 (MQ=255)
cccGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTg < 2:8105906/145‑1 (MQ=255)
ccGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAACTTCTGCGCCg > 1:8106291/1‑149 (MQ=255)
cgcgCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCgg > 2:8106291/1‑149 (MQ=255)
cgcgCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGt < 2:8105829/150‑1 (MQ=255)
cgcgCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGt < 1:8105856/150‑1 (MQ=255)
ccTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAgc > 1:8106306/1‑150 (MQ=255)
gTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTa > 2:8106309/1‑143 (MQ=255)
ttCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAgcgc < 1:8106093/148‑1 (MQ=255)
ttCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAgcgc < 1:8105872/148‑1 (MQ=255)
ttCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCtt < 2:8106149/150‑1 (MQ=255)
tGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTAcgc < 1:8105694/150‑1 (MQ=255)
gACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTAcgcg > 1:8106322/1‑150 (MQ=255)
aCGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGt > 2:8106321/1‑150 (MQ=255)
cGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTc < 1:8105659/150‑1 (MQ=255)
tccAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGAt < 2:8106023/149‑1 (MQ=255)
ccAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGGATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGGAAAgcg > 2:8106335/1‑136 (MQ=255)
ccAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGAtg > 1:8106337/1‑150 (MQ=255)
ccAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGAt < 2:8105458/149‑1 (MQ=255)
gAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGAtgttg < 2:8105956/150‑1 (MQ=255)
atatGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGAtgttgt > 2:8106345/1‑149 (MQ=255)
atatGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTtgtg < 1:8105503/150‑1 (MQ=255)
tGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGGACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGccc > 1:8106355/1‑150 (MQ=255)
cGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGa > 2:8106360/1‑149 (MQ=255)
gATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACt > 1:8106370/1‑150 (MQ=255)
aTTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTaa > 2:8106369/1‑118 (MQ=255)
aTTGGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGNAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACtt < 2:8105939/150‑1 (MQ=255)
ttGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGc > 1:8106380/1‑150 (MQ=255)
gCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCa > 1:8106388/1‑150 (MQ=255)
cGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGNCTGTCTCAATCTTAATGCCCTGCTGCTTCATGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTAGGCGTCGATGTTGTGCCCGAACTTGCCAt < 2:8105977/150‑1 (MQ=255)
cGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCa < 2:8106075/149‑1 (MQ=255)
cGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCAt < 1:8106137/150‑1 (MQ=255)
cGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCAt < 1:8105801/150‑1 (MQ=255)
tGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATg > 2:8106394/1‑149 (MQ=255)
cTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTc > 1:8106399/1‑150 (MQ=255)
tGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCGGGAAATGAACGACAAATTCTGCGCCGGTAAAGCGCTTACGCGTCggt > 2:8106407/1‑121 (MQ=255)
gCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTc > 1:8106412/1‑150 (MQ=255)
ttAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCCGTCCt > 2:8106418/1‑150 (MQ=255)
aaGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCtt < 1:8105437/149‑1 (MQ=255)
aGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGCTGTTGTGCCCGAACTTGCCATGCTCCAGTCCtttt > 1:8106430/1‑150 (MQ=255)
aGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCtttt < 2:8105713/150‑1 (MQ=255)
aGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCttt < 1:8105577/149‑1 (MQ=255)
gCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGACATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTttct > 2:8106431/1‑150 (MQ=255)
cGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTg > 1:8106445/1‑150 (MQ=255)
cGTAAACAGGCAGGATAGAACCGCCCGAAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCt > 2:8106443/1‑83 (MQ=255)
tAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTg < 2:8105753/148‑1 (MQ=255)
aaCAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGcc > 1:8106455/1‑150 (MQ=255)
aggcaggATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGAc > 2:8106461/1‑150 (MQ=255)
aggcaggATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGAc < 1:8106058/150‑1 (MQ=255)
aggcaggATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGAc > 1:8106467/1‑150 (MQ=255)
ggcaggATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGAtgttg < 2:8105635/106‑1 (MQ=255)
gcaggATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGc < 2:8105214/123‑1 (MQ=255)
gcaggATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACtt > 2:8106474/1‑150 (MQ=255)
ggATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTcc < 1:8105961/150‑1 (MQ=255)
gATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCg > 2:8106482/1‑150 (MQ=255)
cgAACCGCCCGGCATGCCTGTCCCAATCTTAATGCCCTGCTGCTCCac > 2:8106491/2‑47 (MQ=255)
aGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCgg > 1:8106491/1‑148 (MQ=255)
gAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGa < 1:8105913/149‑1 (MQ=255)
cGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCg < 2:8105842/142‑1 (MQ=255)
gCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCt > 1:8106506/1‑150 (MQ=255)
cGGAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTaa < 1:8105935/150‑1 (MQ=255)
ggAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCa < 2:8105573/110‑1 (MQ=255)
ggAATGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTaaa > 1:8106515/1‑150 (MQ=255)
aaTGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAAc > 2:8106518/1‑149 (MQ=255)
aaTGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACg < 1:8105891/150‑1 (MQ=255)
aTGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGa < 2:8105775/150‑1 (MQ=255)
tGCCTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGa > 1:8106524/1‑149 (MQ=255)
cTGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGa > 2:8106531/1‑146 (MQ=255)
tGTCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAAc > 1:8106536/1‑150 (MQ=255)
tCACAATCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAAcc < 1:8105746/149‑1 (MQ=255)
acaATCTTAATTCCCTGCTGCTCCAGGAAATGAAAGATAAATTCTGCGCAGGTAAAGCGCTTACGCGTCGAtgt > 2:8106544/1‑74 (MQ=255)
aTCTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGa > 2:8106552/1‑138 (MQ=255)
cTTAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCgg > 1:8106558/1‑150 (MQ=255)
ttAATGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGt > 2:8106561/1‑125 (MQ=255)
aaTGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGt < 1:8105843/148‑1 (MQ=255)
aTGCCCTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTg > 1:8106573/1‑150 (MQ=255)
cccTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTgcgc > 2:8106575/1‑150 (MQ=255)
ccTGCTGCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAgg > 1:8106588/1‑117 (MQ=255)
ctgctgCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCcg < 1:8105601/150‑1 (MQ=255)
cggctgctCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTgcg < 1:8105785/145‑1 (MQ=255)
tgctgcTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGANGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGAAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGcc > 1:8106595/1‑148 (MQ=255)
ctgCTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTgc < 1:8106039/143‑1 (MQ=255)
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GTGCGCGCCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGCTTTGGCTTAAGGCATCGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGTTCCAGGAAATGAACGATAAATTCTGCGCCGGTAAAGCGCTTACGCGTCGATGTTGTGCCCGAACTTGCCATGCTCCAGTCCTTTTCTTCTGGGCCGACTTTCCGGGAGGTGCTTAAACGAAAAACCCCGCCCGGTTTGCGCCGGCG > NC_000913/3852567‑3852859
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
