Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F64 I1 R1
|
13 |
136.1 |
4526780 |
95.4% |
4318548 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,716,574 |
G→T |
A10S (GCC→TCC) |
yiaD → |
multicopy suppressor of bamB; outer membrane lipoprotein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,716,574 | 0 | G | T | 98.9%
| 571.0
/ NA
| 181 | A10S (GCC→TCC) | yiaD | multicopy suppressor of bamB; outer membrane lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (99/80); total (100/81) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 188 total aligned reads displayed.
CAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGAAGAAAGAT > NC_000913/3716428‑3716720
|
cAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGcctccg > 1:1011014/1‑150 (MQ=255)
cAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGcctccg > 1:2243071/1‑150 (MQ=255)
aGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGt > 1:1785729/1‑150 (MQ=255)
gTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTa > 2:1809088/1‑150 (MQ=255)
aaTATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTagtga > 2:1169003/1‑150 (MQ=255)
aaTATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTagtga > 2:1012857/1‑150 (MQ=255)
atatTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTagtgag < 2:2097432/150‑1 (MQ=255)
tacttacAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGgc > 1:1411745/1‑150 (MQ=255)
tacttacAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGgc < 2:9510/150‑1 (MQ=255)
cttacAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCCCGCGGCATAATCTCCCGCCACGGAACCCGTGGCTAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGgcgc > 2:1305056/1‑150 (MQ=255)
aaTTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGTCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGc < 2:172106/150‑1 (MQ=255)
aaTTTCCGAGTAATCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGc < 2:916408/150‑1 (MQ=255)
tCCTAGTATTCCCAGGAATAATCTTCATGTTAACGATGCATAATCTCCCTCCACGGAACCCGTGGCAAAGAATAAATAGGGTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGTGTGGCTCTCTGGCGGTa > 2:1092445/1‑150 (MQ=255)
cGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAAAGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATc > 1:655505/1‑150 (MQ=255)
aGTATTCCCATGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTg < 1:1931529/150‑1 (MQ=255)
ttCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTg < 1:2189081/150‑1 (MQ=255)
cccAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGATTAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGca < 1:249884/150‑1 (MQ=255)
ccAGGAATAATCTTCATGTTCACGCGGAATAATCTCGCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGcac < 2:2018738/150‑1 (MQ=255)
ggAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAAc < 2:1155783/150‑1 (MQ=255)
ggAATAATCTTCATGTTCACGCGGCATAAGCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTAATGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAAc < 1:1685401/150‑1 (MQ=255)
gAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACt > 2:50304/1‑150 (MQ=255)
ataatCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTaa > 1:748708/1‑150 (MQ=255)
ataatCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTaa > 1:2065626/1‑150 (MQ=255)
taatCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAAc < 1:1904647/150‑1 (MQ=255)
atCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAAccc < 2:577082/150‑1 (MQ=255)
tCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCt < 2:958147/150‑1 (MQ=255)
cACGCGGCATAATCTCCCGCCACTGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATATTATTGCCTCCGTAGTGAGTGGCTCTATGTCGGTATCTGGCTGCACAACTAACCCTTACACCGGCg > 2:2014527/1‑150 (MQ=255)
cACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCCGAACTAACCCTTACACCGGCg > 1:223227/1‑150 (MQ=255)
cACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGGTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCg > 2:381580/1‑150 (MQ=255)
cgGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTTCACAACTAACCCTTACACCGGCGAAcg < 2:1450755/150‑1 (MQ=255)
cgGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACCCCGGCGAAcc > 2:354413/1‑149 (MQ=255)
cgGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAAcg < 1:1406436/150‑1 (MQ=255)
ggCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAAcgc < 2:675432/150‑1 (MQ=255)
cATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGa > 1:2126192/1‑150 (MQ=255)
aTAATCTCCAGCCACGGAACCCGTGGCAAAGAATAAAAAGTTTAGTAAGGATTAACAATGAAGAAACGTGATGATCTTATTGCCTCCGTAGTGAGTGGAGCTCTGGCGTTATCTGTCTGCAAAACTAAACATTAAAACGGCGAACTCGaa > 2:1843722/1‑150 (MQ=255)
tAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAg < 2:1059923/150‑1 (MQ=255)
tAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAg > 1:853812/1‑150 (MQ=255)
tAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAg > 1:1843532/1‑150 (MQ=255)
tAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAg > 1:1113602/1‑150 (MQ=255)
aTCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCa > 2:1262241/1‑150 (MQ=255)
tcCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGt > 2:466493/1‑150 (MQ=255)
tcCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCATCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGt > 1:937483/1‑150 (MQ=255)
ctttgCCACGGGTTCCGTGGCGAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGt > 1:454292/5‑150 (MQ=255)
tttgCCACGGGTTCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTa > 1:1871969/4‑150 (MQ=255)
cccGCCACGGAACCTGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTa < 1:1768254/150‑1 (MQ=255)
ccGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTaa > 1:801502/1‑150 (MQ=255)
ccACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATc > 2:2143457/1‑150 (MQ=255)
cACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCt < 1:1086777/150‑1 (MQ=255)
cACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCt < 1:1033195/150‑1 (MQ=255)
aCCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATc < 2:1859485/150‑1 (MQ=255)
cccGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTACCCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCg > 2:1387073/1‑150 (MQ=255)
ccGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCgg > 2:1484932/1‑150 (MQ=255)
ccGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCATTACACCGGCGAAAGCGAAGCAGGTAAATCTGCTATCgg > 1:528922/1‑150 (MQ=255)
gCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAg > 1:263322/1‑150 (MQ=255)
cAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAgg > 2:393081/1‑150 (MQ=255)
cAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAgg > 1:714645/1‑150 (MQ=255)
aaGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTc < 2:2186187/150‑1 (MQ=255)
aaTAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTgg > 2:722204/1‑150 (MQ=255)
aaaaaGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGct > 2:485190/1‑150 (MQ=255)
aaaGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGctct > 2:1650726/1‑150 (MQ=255)
aGGTTATTAAGGATAAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGctctct < 2:429228/150‑1 (MQ=255)
gTTATTATGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCg < 1:1238901/150‑1 (MQ=255)
gTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCg > 1:1609911/1‑150 (MQ=255)
tattaAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTg < 1:2107028/150‑1 (MQ=255)
attaAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTgg < 1:1809088/150‑1 (MQ=255)
attaAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTgg > 2:1918006/1‑150 (MQ=255)
ataaaGCATTAACAATGAAGAAACGTGTTTATCTAATTGCCTCCGTAGTGAGGGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCGCTCTCGTgg < 1:1689276/147‑1 (MQ=255)
ttaAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTTGTggg < 1:622599/150‑1 (MQ=255)
ttaAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTggg < 2:618137/150‑1 (MQ=255)
taAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCATTCGGCCCAGGTCTGGGCTCTCACGTGGgc > 1:1541460/1‑150 (MQ=255)
aaCAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTAt < 2:1196006/150‑1 (MQ=255)
aaCAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTAt < 2:1188226/150‑1 (MQ=255)
aaCAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTAt > 2:1370535/1‑150 (MQ=255)
cAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACATCTAACCCGTACACCGGCGCACGCGAAGCAGGTAAATCTGATATCGGCGCAGGTCTGGGCGCTCTCGTGGGCGCGGGGATTg > 2:165717/1‑150 (MQ=255)
cAATGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTg > 2:412627/1‑150 (MQ=255)
aaTGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTgg < 2:2243071/150‑1 (MQ=255)
aaTGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTgg < 1:1472326/150‑1 (MQ=255)
aaTGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTgg < 1:1008564/150‑1 (MQ=255)
aTGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCTGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGt > 1:32281/1‑150 (MQ=255)
aTGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGt > 2:1038329/1‑150 (MQ=255)
aTGAAGAAACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGt > 2:1406608/1‑150 (MQ=255)
gaagaaACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCTCAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCGCGTGGGCGCGGGTATTGGTgc > 1:597931/1‑150 (MQ=255)
aagatACGTGTTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACGCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTTGGCTCTCTCGTGGGCGCGGGTATTGGTgcg < 1:1644466/150‑1 (MQ=255)
agtaaCGTGTTTATCTTATGGCCTCCGGAGTGCGTGGCGCTCTGGCGGCATCTGGCTGCCCAACAAACCCTTACACCGGCGAACGCGAAGCAGGGAAATCTGCTAGCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTgcgc < 1:355035/147‑1 (MQ=255)
cGTGCTTATCTTAATCCCTCCGTCGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGctctct < 2:818739/150‑1 (MQ=255)
gtgtTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCtctt > 1:69649/1‑150 (MQ=255)
gtgtTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCtctt < 1:2143457/150‑1 (MQ=255)
tgtTTATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCtcttc > 2:404232/1‑150 (MQ=255)
ttATCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCttcttc > 2:169372/1‑150 (MQ=255)
tagcTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCg < 2:1594322/147‑1 (MQ=255)
aTCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCga > 1:2004698/1‑150 (MQ=255)
tCTTATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCgaa < 1:4169/150‑1 (MQ=255)
ttATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGGATCTGGCTGCACAACTACCCCTTCCACCGGCGAACGCGACGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCgaaga < 1:1495039/150‑1 (MQ=255)
tATTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCgaagaa > 2:1768702/1‑150 (MQ=255)
aTTGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGaagcaa > 1:2031509/1‑150 (MQ=255)
ttGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGaagaaag < 2:540276/150‑1 (MQ=255)
ttGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGaagaaag < 1:2137901/150‑1 (MQ=255)
tGCCTCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTACCCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGaagaaaga > 2:1639385/1‑150 (MQ=255)
gcctccGTAGTGAGTGGCGCTCTGTCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGAAGAAAGAt > 2:2132196/1‑150 (MQ=255)
gcctccGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGAAGAATGAt > 1:1505947/1‑150 (MQ=255)
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CAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAAGAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGAAGAAAGAT > NC_000913/3716428‑3716720
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
