Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F46 I1 R1
|
14 |
91.3 |
2941982 |
97.3% |
2862548 |
148.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,362,665 |
A→C |
intergenic (‑39/+68) |
pheU ← / ← yjdC |
tRNA‑Phe/putative transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,362,665 | 0 | A | C | 98.9%
| 273.3
/ NA
| 91 | intergenic (‑39/+68) | pheU/yjdC | tRNA‑Phe/putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (48/42); total (49/42) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAGTGTCGA > NC_000913/4362525‑4362806
|
tccacggAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGGTATCCGGGCGACGGGCCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAAttt > 2:1329900/6‑149 (MQ=21)
cGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCTAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGTGCTATCCGTGCTACGGGGTGCATTAAACCGTATTCTGCAGATCTCGTCACCCTAATTTCa < 1:1070460/149‑1 (MQ=21)
cGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCa < 1:783174/149‑1 (MQ=255)
gTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAg > 1:471882/1‑149 (MQ=255)
ccGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCg > 2:3085/1‑149 (MQ=255)
cGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGa < 2:625162/149‑1 (MQ=255)
gTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGAt > 2:48861/1‑149 (MQ=255)
atatGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCaa < 1:531155/149‑1 (MQ=255)
aaTTTGGTGCCCGGACTCGGAATCGAACAAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCGAACCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATACATCtccg > 2:187714/1‑146 (MQ=18)
tttGGTGCCCGGACTCGGAAAAGAACCAAGGACACGGGGATTTTCAATCCACTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATATCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTa > 1:1277118/1‑149 (MQ=255)
ttGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTaa < 1:661381/149‑1 (MQ=255)
ggTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTaa > 1:940195/1‑119 (MQ=255)
ggTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTaa < 2:940195/119‑1 (MQ=255)
cGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCgg > 1:1356178/1‑149 (MQ=255)
ggACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGc < 2:965638/149‑1 (MQ=255)
tCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAAt < 2:320186/149‑1 (MQ=255)
tCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAAt < 2:1356178/149‑1 (MQ=255)
ggAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAACCCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCg > 1:1234204/1‑149 (MQ=255)
ggAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCg > 2:1420642/1‑149 (MQ=255)
ggAATAGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAACGCGATTCAACTGCTTAAGATAGCGGCAAATCg > 2:531822/1‑149 (MQ=255)
aTCGAACCAAGGTCACGGGGATTTTCAATCCCCTTCTCTACCGACTGAGCTATCCGGGCAACGGGGATAATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGctt < 1:439830/149‑1 (MQ=37)
tCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGctta > 2:677227/1‑148 (MQ=255)
cGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTATGATTGCGGCAAATCGcttct > 1:923788/1‑149 (MQ=255)
aaCCAAGGACACGGGGATTTTCAATCCCCTGCTCTCCCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCttt > 1:910685/1‑149 (MQ=255)
aaCCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACCTCTCGTCACCATAAGTTCAGTAAATGCGAATCAACGGCTTAAGATTGCGGCAAATCGctaatgt > 2:803295/1‑144 (MQ=21)
aCCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCtttt > 1:636462/1‑149 (MQ=255)
aCCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCtttt < 2:659645/149‑1 (MQ=255)
ccAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGGGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTc < 2:252243/149‑1 (MQ=255)
cAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCt < 2:1193/149‑1 (MQ=255)
aGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCtgt > 1:572371/1‑149 (MQ=255)
aGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCACTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCtgt > 1:394519/1‑149 (MQ=255)
ggACACGGGTATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAATCCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCtgtg < 2:362068/149‑1 (MQ=255)
gACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTgtgt < 1:1197400/149‑1 (MQ=255)
acacGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGtt > 1:921412/1‑149 (MQ=255)
cacGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGttt > 2:1092417/1‑149 (MQ=255)
cacGGCGATTTGCAATCCCCGGCTCTACCGACTTCGCTATCCTTGCAACTGGGCGCATTAAACCGTAAGCTGCACATCTCGTCTCCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGTTTGCGGAAAATCGCTTCTTTTCTGTGttt < 2:317676/149‑1 (MQ=255)
acGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTc > 2:6608/1‑149 (MQ=255)
cGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCt < 1:145515/149‑1 (MQ=255)
cGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACAGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAATATTGCGGCAAATCGCTTCTTTTCTGTGTTTCt < 1:765475/149‑1 (MQ=255)
aggggATTGAAAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAACCCGTAATCTGCACCTCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCt > 1:295520/2‑149 (MQ=38)
ggggATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCCCATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTGTGTGTTTCTg > 2:354242/1‑149 (MQ=255)
ggggATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTg > 1:168426/1‑149 (MQ=255)
gggATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGt < 1:489042/149‑1 (MQ=255)
gggATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGt > 1:1167596/1‑149 (MQ=255)
gATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTACTTTCAGTAAAAGCTATTCAACTGCTTATGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGtaa > 1:1189080/1‑147 (MQ=255)
gATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCa < 1:870331/149‑1 (MQ=255)
attgaaaaTCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCCCCTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAg > 1:373196/7‑149 (MQ=38)
aTTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCATATCGCTTCTTTTCTGTGTTTCTGTCAg < 2:572917/149‑1 (MQ=255)
aTTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAg < 2:579234/149‑1 (MQ=255)
aTTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGCGCAACGGGGCCCATTAAACCGAAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCTACTGCTTAAGATAGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAg > 1:33005/1‑149 (MQ=38)
ttCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTc > 1:1406686/1‑149 (MQ=255)
cAATCCCCTGCTCTACCGACTGATCTATCCGTGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCaa < 2:1289674/149‑1 (MQ=255)
cAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACCTCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCaa < 2:1127959/149‑1 (MQ=255)
cAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTATGTTTCTGTCAGGTCaa < 2:587681/149‑1 (MQ=255)
cccTGCTCTACCGCCTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTGTGTGTTTCTGTCAGGTCAATGcac > 2:939466/1‑149 (MQ=255)
cccTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACGCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGccc > 2:1323585/1‑147 (MQ=255)
cccTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGcac < 1:829184/149‑1 (MQ=255)
ccTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAACAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGcacc < 2:544591/149‑1 (MQ=255)
gCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCaccacc < 1:1197624/149‑1 (MQ=255)
ctACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTg < 1:1161584/149‑1 (MQ=255)
tACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTgg > 1:1228344/1‑149 (MQ=255)
tGAGCTATCCGGTCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTATAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGGTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGc > 2:99584/1‑149 (MQ=255)
aGCTATCCGGGCAACGGGGTGCATTAAACCGTAATCTGCACATCTCGTCACCCAAATTTCAGTAAAAGCGATTCAACTGATTAAGATTGCGGCAAATCTCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCgg > 2:1162986/1‑149 (MQ=255)
aGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCgg > 2:594050/1‑149 (MQ=255)
aGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCgg > 1:565556/1‑149 (MQ=255)
aGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCgg < 1:48861/149‑1 (MQ=255)
gCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGGCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCggg < 1:1153998/149‑1 (MQ=255)
aTCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGa > 2:26792/1‑149 (MQ=255)
tCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGaa > 1:1389345/1‑149 (MQ=255)
ccGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAg < 1:1420642/149‑1 (MQ=255)
ccGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAg < 1:705769/149‑1 (MQ=255)
cGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAgc > 2:1053070/1‑149 (MQ=255)
ggCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAgcgc > 2:1295169/1‑149 (MQ=255)
aCGGGGCGCATTAAACCGTAATCTGCACATCTCGTAACCCTAATTTCAGTAAAAGCTATTCAACTGCTTAAGATTGCGGCTAATCGCTTCATTTCTTTGTTTATGTCATGTCATATCACCACCCTGGCGGCAGAGGGCGAAGCGCTGGa > 1:788507/1‑149 (MQ=255)
cGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGat < 2:636462/149‑1 (MQ=255)
gggCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGatat < 1:480284/149‑1 (MQ=255)
gggCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGGCAATTCACAACCATGGCGGCAGCTGGCGAAGCCCAGGatat > 2:181690/1‑149 (MQ=255)
cgcATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCtt < 2:1206598/149‑1 (MQ=255)
cATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTcc < 1:1026152/149‑1 (MQ=255)
aaCCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAg > 1:250941/1‑149 (MQ=255)
aCCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCTAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGc > 2:388432/1‑149 (MQ=255)
ccGTAATCTGCCCATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGcc > 2:75094/1‑149 (MQ=255)
tAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGAt < 2:471882/149‑1 (MQ=255)
aTCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCggg > 2:310208/1‑117 (MQ=255)
aTCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCggg < 1:310208/117‑1 (MQ=255)
cTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGc < 1:3085/149‑1 (MQ=255)
cTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCATTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGc < 1:803295/149‑1 (MQ=255)
gCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATTTCTTCCGCCAGCCGATGTGCAg > 1:838897/1‑149 (MQ=255)
caTCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAgtgt > 1:462099/1‑149 (MQ=255)
ctcGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAGTGTCGa > 1:637324/1‑149 (MQ=255)
ctcGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCCGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAGTGTCGa < 2:942506/149‑1 (MQ=255)
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TCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAGTGTCGA > NC_000913/4362525‑4362806
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
