Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F71 I1 R1 18 85.1 3251134 97.2% 3160102 139.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,487,100 G→T V104F (GTC→TTC)  yhfK → putative transporter, FUSC superfamily inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,487,1000GT98.4% 212.4 / NA 63V104F (GTC→TTC) yhfKputative transporter, FUSC superfamily inner membrane protein
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base T (32/30);  total (32/31)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATAAACGTTTTTTCAAACGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCGTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCACTCTCTGGTA  >  NC_000913/3486969‑3487236
                                                                                                                                   |                                                                                                                                        
aTAAACGTTTTTTCAAACGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCActgct                                                                                                                                  <  1:606076/140‑1 (MQ=255)
    aCGTTTTTTCAAACGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGc                                                                                                                              <  1:1395804/140‑1 (MQ=255)
     cGTTTTTTCAAACGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCt                                                                                                                             <  2:968140/140‑1 (MQ=255)
       ttttttCAAACGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTgg                                                                                                                           >  1:549730/1‑140 (MQ=255)
                aCGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGc                                                                                                                  >  1:1349555/1‑140 (MQ=255)
                 cGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCa                                                                                                                 <  1:1351041/140‑1 (MQ=255)
                 cGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCa                                                                                                                 <  1:1355017/140‑1 (MQ=255)
                     tAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCa                                                                                                             <  2:311083/140‑1 (MQ=255)
                     tAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCa                                                                                                             <  2:148124/140‑1 (MQ=255)
                            tGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGATCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGc                                                                                                      >  2:715675/1‑140 (MQ=255)
                            tGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGc                                                                                                      >  2:944138/1‑140 (MQ=255)
                            tGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGc                                                                                                      >  1:1283630/1‑140 (MQ=255)
                            tGGTGCGTCGCTGTTTGCCACCTGTAGCTTGATGACACAGCTACTACTGGCAAAAGATGTTCCCATGCCCTTTTTGCTGACCGGATTAACGCTGGTCCTTGGATTGACTGCTGAGCGGGGGCCATTGCACGCAAAATTGc                                                                                                      >  2:1401250/1‑140 (MQ=255)
                             ggTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCt                                                                                                     <  1:304960/140‑1 (MQ=255)
                             ggTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCt                                                                                                     <  1:200403/140‑1 (MQ=255)
                             ggTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCt                                                                                                     <  2:640598/140‑1 (MQ=255)
                                 cGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCt                                                                                                 >  1:781645/1‑140 (MQ=255)
                                  gTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTg                                                                                                <  1:788742/140‑1 (MQ=255)
                                      cTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGATGGAACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATc                                                                                            >  2:549019/1‑140 (MQ=255)
                                           tGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGTGCTGGGGCCATTGCACGCCATATTGCTTCCTGCATCgctgc                                                                                       >  2:1425442/1‑140 (MQ=255)
                                                          gCTGACACAGCTACTACTGGCAAAAGTTGTTCGCCTGCCCTTTTTGCTGACCGGATTATCGGTGGTAGTTGGCTTCACTGGTGAGCTGGGGCCATTGCACGCAATATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTa                                                                        >  2:227084/1‑140 (MQ=255)
                                                          gCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGTCCGGATTATCGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATGTTTa                                                                        >  2:116570/1‑140 (MQ=255)
                                                          gCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTGTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTa                                                                        >  2:698926/1‑140 (MQ=255)
                                                          gCTGACACAGCTACTACTGGCAAAAGATGTTCCCCAGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACAGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTa                                                                        >  2:461906/1‑140 (MQ=255)
                                                             gACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTAccc                                                                     <  1:254230/140‑1 (MQ=255)
                                                              acacAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTCTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCt                                                                    <  1:1392250/140‑1 (MQ=255)
                                                                   gCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGtt                                                               <  1:582619/140‑1 (MQ=255)
                                                                       ctactGGGAAAAGATGTTCCCCTGCCCTTTTTGGTGACCTGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGc                                                           <  2:374520/140‑1 (MQ=255)
                                                                       ctactGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGTCCATTGCACGCAAAATTGCTTCCAGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGc                                                           <  2:216494/140‑1 (MQ=255)
                                                                       ctactGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGc                                                           <  2:279534/140‑1 (MQ=255)
                                                                          ctGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCggg                                                        >  2:1446422/1‑140 (MQ=255)
                                                                            ggCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGAt                                                      <  1:295112/140‑1 (MQ=255)
                                                                              cAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATAc                                                    >  2:989694/1‑140 (MQ=255)
                                                                              cAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATAc                                                    >  2:989863/1‑140 (MQ=255)
                                                                                 aaGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATg                                                 >  1:875847/1‑140 (MQ=255)
                                                                                 aaGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATg                                                 >  2:675092/1‑140 (MQ=255)
                                                                                 aaGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATg                                                 <  1:1607791/140‑1 (MQ=255)
                                                                                 aaGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATg                                                 >  2:679003/1‑140 (MQ=255)
                                                                                 aaGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATg                                                 <  1:1235896/140‑1 (MQ=255)
                                                                                 aaGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATg                                                 <  1:1235822/140‑1 (MQ=255)
                                                                                 aaGATGTTCCCCTGCCCTTTATGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATg                                                 >  1:876154/1‑140 (MQ=255)
                                                                                       ttCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTc                                           >  1:1019902/1‑140 (MQ=255)
                                                                                       ttCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTc                                           >  1:1249428/1‑140 (MQ=255)
                                                                                                 cTTTTTGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGt                                 >  2:207542/1‑140 (MQ=255)
                                                                                                   ttttGCTGACCGGATTAACGCTGGTACTTGGCGTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTg                               <  2:700513/140‑1 (MQ=255)
                                                                                                    tttGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGc                              >  1:1034021/1‑140 (MQ=255)
                                                                                                     ttGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCt                             <  2:25637/140‑1 (MQ=255)
                                                                                                     ttGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCt                             <  2:386745/140‑1 (MQ=255)
                                                                                                     ttGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCt                             <  1:1446422/140‑1 (MQ=255)
                                                                                                     ttGCTGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCGTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCt                             <  2:1598874/140‑1 (MQ=255)
                                                                                                         tGACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATc                         >  1:797753/1‑140 (MQ=255)
                                                                                                          gACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCt                        <  1:1083801/140‑1 (MQ=255)
                                                                                                          gACCGGATTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCt                        >  1:1565361/1‑140 (MQ=255)
                                                                                                                aTTAACGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGt                  <  2:626753/140‑1 (MQ=255)
                                                                                                                   aaCGCTGGTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTgg               <  2:1510207/140‑1 (MQ=255)
                                                                                                                          gTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCTATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCActct        >  1:1007651/1‑140 (MQ=255)
                                                                                                                          gTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCActct        >  1:85984/1‑140 (MQ=255)
                                                                                                                          gTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCActct        >  1:144134/1‑140 (MQ=255)
                                                                                                                          gTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCActct        <  2:1019902/140‑1 (MQ=255)
                                                                                                                          gTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCActct        >  2:1277691/1‑140 (MQ=255)
                                                                                                                          gTACTTGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCActct        >  2:253352/1‑140 (MQ=255)
                                                                                                                               tGGCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCACTCTCTGGt   <  1:602410/140‑1 (MQ=255)
                                                                                                                                ggCTTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCACTCTCTGGTa  >  2:189832/1‑140 (MQ=255)
                                                                                                                                   |                                                                                                                                        
ATAAACGTTTTTTCAAACGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCGTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCACTCTCTGGTA  >  NC_000913/3486969‑3487236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A