Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A23 F67 I1 R1	23	41.0	1710050	87.8%	1501423	142.4

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,572,474	IS5 (+) +4 bp	coding (2726‑2729/2796 nt)	pqqL ←	putative zinc peptidase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1397238	NA (NA)	70 (1.560)	60/282	0.0	100%	noncoding (1195/1195 nt)	IS5	repeat region
*	?	NC_000913	1572474 =	0 (0.000)	70 (1.560)	60/282	0.0	100%	coding (2729/2796 nt)	pqqL	putative zinc peptidase
*	?	NC_000913	= 1572477	0 (0.000)	112 (2.490)	75/282	0.0	100%	coding (2726/2796 nt)	pqqL	putative zinc peptidase
*	?	NC_000913	= 2290113	NA (NA)	112 (2.490)	75/282	0.0	100%	noncoding (1/1195 nt)	IS5	repeat region

GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1397098‑1397238

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAGG  >  NC_000913/1572474‑1572605

GGGTATAACGCCTTAAATTGCGAAGAAACTGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAACTCGGCTCCAGCTTGCAGAAATGAAATGTCTGAGTCAGCCGAGAAGAATTTCTCCGCTTATTCGCACCTTCCTT                                                                                                                                    <  2:12225/143‑1

GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTT                                                                                                                                    <  1:837793/143‑1

   gattatGCCTTAAATGGGGAAGAAACGGGCTAAATAGGCTGATTCAAGGCATTTACGGTAGAAAAAATCGGCTCAAACTTGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAAC                                                                                                                                 <  2:388851/137‑1

    ATAGCGCCTGAAATGGCGAGGAAACGGTCTAATTAGGTTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAACCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACA                                                                                                                                <  2:310565/143‑1

    ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTctat                                                                                                                                >  2:290769/1‑139

     TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGACTTTCCCCGCTTATTCGCGCCTTCCTTAACAT                                                                                                                               >  1:278998/1‑143

      AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATT                                                                                                                              <  2:306809/143‑1

        CGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGCGAAGAATTTCCCCGCTTATTCGCAACTTCCTTAACATTCT                                                                                                                            >  2:155592/1‑143

           CTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTA                                                                                                                         >  2:618926/1‑143

               aagGGCGAAGAAACGGTCTAAATAGGCCTAGATAAGTCATGTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGT                                                                                                                     <  1:571943/140‑1

               AATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAAATTACAAGCTTATATGCACCTTCCTTAACATACTCTACCGa                                                                                                                     >  1:801943/1‑142

                   GCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATT                                                                                                                 >  1:813740/1‑143

                    CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCAGAGAAGAATTTCCCCGCTTATTCGCACCTGCCTTAACATACACTACCGTCATat                                                                                                                >  1:43452/1‑141

                     GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTATCTAACGTCATTTG                                                                                                               >  1:542553/1‑143

                         AAACGGTCTAAATAGCCTGATTCAATGCATTTACAGTATAAAAAATCGGCTCAAACATCAAGAAATGAAATGACTGATTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATGCTCTACCGGCATTTGTTTC                                                                                                           <  2:746189/143‑1

                               TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAAT                                                                                                     >  2:263433/1‑143

                                  atATAGTCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGC                                                                                                  <  1:210350/141‑1

                                   AATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCT                                                                                                 >  2:478594/1‑143

                                     TAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCC                                                                                               >  1:854478/1‑143

                                     TAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCC                                                                                               <  1:455912/143‑1

                                        aCTGACTAAAGGGAGTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGC                                                                                            <  2:626332/142‑1

                                        GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGCAATGACATGACTGATTCAGCCGAGAAGAATTTCACCGCTAAATAGAACCAACCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGC                                                                                            >  1:12092/1‑143

                                        GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGC                                                                                            >  2:624588/1‑143

                                        GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATAAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACATTCCTTAACATTCTCTACCATCATTTATTTCAACAATTGCTTCTac                                                                                            >  2:412137/1‑141

                                            ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACGTGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAG                                                                                        >  2:17901/1‑143

                                            ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAG                                                                                        <  2:397656/143‑1

                                             ttaAAGTCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGT                                                                                       <  1:751740/140‑1

                                              TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTGTACCTTCCTTTGTTTCATCAATTGCTCCTGCTCgttc                                                                                      >  1:564129/1‑139

                                                AAGGCATTTACGGGAGAAAAAATCGGCTCAAACCTGAAGAAATGAACTGACTGAGTCAGCCCAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCCGCTGAGcaca                                                                                    >  1:201654/1‑139

                                                AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTAGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCA                                                                                    >  1:327992/1‑143

                                                 AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACCATTGCCTCTGCTCAGTACAT                                                                                   >  2:366283/1‑143

                                                       TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCA                                                                             <  1:214946/143‑1

                                                        TACGGGAGAAAAAATCGGCTCAAACATGATGATATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCGTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAG                                                                            <  1:210092/143‑1

                                                           GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCGTGCTGCAGGAT                                                                         >  2:448084/1‑143

                                                           GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGGAGGAa                                                                         >  2:767429/1‑142

                                                            GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGATTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTCTTCAGTCCATTCTGCAAGAgc                                                                        >  2:550181/1‑141

                                                               GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCGTATTCGCACCTTCCTTAGCATTCTCTAGCGTCATTTGTTTTAACAATTGCTCCTACTCAGTCAATGATACAGGAACGTC                                                                     >  1:8137/1‑143

                                                                AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGAAGGATCTTCA                                                                    >  1:259800/1‑143

                                                                    AATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCTCACCTTCCTTAATTTTTTCTTCCTTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATT                                                                <  1:429882/143‑1

                                                                       CGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCACCCATTGCTCCTGCTCCGTCCATGCTGCAGGATCGTCATATTGAA                                                             <  1:625966/143‑1

                                                                       CGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAA                                                             <  1:682826/143‑1

                                                                         GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATA                                                           >  2:542030/1‑143

                                                                          CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAA                                                          <  2:151758/143‑1

                                                                           TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTAACTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAG                                                         >  1:596106/1‑143

                                                                               ACATGAAGACATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCTATGCTGCAGGATCGTCATATTGAATAAGACTA                                                     <  2:101209/143‑1

                                                                                 ATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATT                                                   >  2:353502/1‑143

                                                                                  TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTT                                                  <  2:519862/143‑1

                                                                                    AAGAAATGAAATAACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCCTGCTGCAGGATCGTCATATTGAATAAGACTATTTAC                                                <  1:548652/143‑1

                                                                                      tAAATGCAATGACTGTGTGAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAA                                              <  2:724296/142‑1

                                                                                      GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTAAAA                                              >  1:354678/1‑143

                                                                                        AATGAACTGACTGACGAAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTGTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATA                                            <  2:279946/143‑1

                                                                                         ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAG                                           >  2:228442/1‑143

                                                                                               TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCG                                     <  1:473978/143‑1

                                                                                                     aggCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATT                               <  1:741667/140‑1

                                                                                                      GTCAGCCGAGAAGAATTTCCCCGCTTATACGCACCTCCCTTAACATGCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTG                              <  1:33172/143‑1

                                                                                                           cctAGAACAATTTTCCCGCTTATTCGCAACATCCTTAACATTCCCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCATTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAA                         <  1:716775/140‑1

                                                                                                            CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTAACGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATCCTGCATGATCGTCATATTGAATAAGACTATTTTAAATCGTGTTCGCTAACTGTTGAAa                        >  2:65844/1‑142

                                                                                                              AGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGC                      <  1:412137/143‑1

                                                                                                                AAGAATTTCCCCGCTTATTCGCACCTGCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTA                    <  2:548242/143‑1

                                                                                                                  GAATTTCCCCGCTTTGTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACG                  <  2:633599/143‑1

                                                                                                                  GAATTTCCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACG                  <  2:148110/143‑1

                                                                                                                        CCCCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTG            <  1:508813/143‑1

                                                                                                                          CCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGA          >  1:559487/1‑143

                                                                                                                          CCGCTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAAATTTCGCTAATTGTTAAACGCTACGCTGTTGGA          >  1:224672/1‑143

                                                                                                                             tcTATTCGCACCTTCCCTAACATTCTCTTCCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTAGTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATAT       <  2:542553/141‑1

                                                                                                                             CTTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATAT       >  2:573049/1‑143

                                                                                                                              TTATTCGCACCTTCCTTAACATTCTCTACCGTCATTTTTTTCAACAATTGTTCCTGTTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATC      <  1:623545/143‑1

                                                                                                                                ATTCGCACCTTCCTTAACAGCCTCTACCGTCATATGTTTCAACAATTGCGCCTGCTCAGCCCATGCTGCAGGAACGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGA    <  1:589861/143‑1

                                                                                                                                  TCGCACCTTCCTTAACGTTTGCTGCCGTCTTTTGTTTGTACAGTTGCTCCTGCTCAGTTCATTCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAGG  <  2:49512/143‑1

                                                                                                                                  TCGCACCTTCCTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAGG  >  1:398444/1‑143

GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1397098‑1397238

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAGG  >  NC_000913/1572474‑1572605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A