Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A24 F66 I1 R1
|
37 |
65.5 |
2715618 |
95.2% |
2585268 |
125.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
BS168_reference_genome |
1,317,152 |
+GT |
intergenic (+23/+5) |
phrA → / ← yjpA |
secreted inhibitor of the activity of phosphatase RapA (quorum sensing)/putative enzyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | BS168_reference_genome | 1,317,152 | 1 | . | G | 95.2%
| 232.7
/ 3.4
| 63 | intergenic (+23/+5) | phrA/yjpA | secreted inhibitor of the activity of phosphatase RapA (quorum sensing)/putative enzyme |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base G (35/25); total (37/26) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | BS168_reference_genome | 1,317,152 | 2 | . | T | 95.2%
| 198.7
/ 3.0
| 63 | intergenic (+23/+5) | phrA/yjpA | secreted inhibitor of the activity of phosphatase RapA (quorum sensing)/putative enzyme |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base T (35/25); total (37/26) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGTTGCGGTCGGGTTCAGCTTTACTCAGGTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GG‑‑C‑TTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGATGACATACGCT > BS168_reference_genome/1317027‑1317274
||
cGTTGCGGTCGGGTTCAGCTTTACTCAGGTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GG‑‑G‑TCttttttatt > 5:160292/1‑135 (MQ=255)
cGTTGCGGTCGGGTTCAGCTTTACTCAGGTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTAATATTGCGGCACGCAATCAAACATGATGCATAAAAAAATAACCTTAT‑‑GG‑‑G‑TCttttttatt > 8:17423/1‑135 (MQ=255)
cGGTCGGGTTCAGCTTTACTCAGGTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATttcttc < 3:148032/138‑1 (MQ=255)
gTCGGGGTCAGCTTTACTCAGGTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGc < 4:54054/139‑1 (MQ=255)
gTTCAGCTTTACTCAGGTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCa < 6:160292/139‑1 (MQ=255)
cAGCTTTACTCAGGTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCAtt < 4:189515/138‑1 (MQ=255)
ggTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAg > 5:29624/1‑139 (MQ=255)
gTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGc > 1:205185/1‑139 (MQ=255)
gTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGc > 7:71253/1‑139 (MQ=255)
gTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGc > 2:121487/1‑139 (MQ=255)
gTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGc > 1:74980/1‑139 (MQ=255)
gTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGc > 8:45112/1‑139 (MQ=255)
gTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGCGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATAGTAAGc > 3:73154/1‑139 (MQ=255)
aTGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCt > 5:231230/1‑137 (MQ=255)
aTGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTc < 8:171124/138‑1 (MQ=255)
aTGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTc < 6:29624/138‑1 (MQ=255)
ggTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTGTTCAGCTGCAAAGCTTTTATCGTCAgaacat > 2:326779/1‑133 (MQ=255)
ggTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCag > 7:162144/1‑138 (MQ=255)
cATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATCTTTCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCagaaga < 5:10264/138‑1 (MQ=255)
aTGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAg < 5:19361/128‑1 (MQ=255)
aTGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAg > 6:19361/1‑128 (MQ=255)
aTGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAg < 1:315546/128‑1 (MQ=255)
aTGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAg > 2:315546/1‑128 (MQ=255)
aTGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCaga > 3:228812/1‑134 (MQ=255)
aTGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCaga < 4:228812/134‑1 (MQ=255)
aTGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATc > 7:210399/1‑139 (MQ=255)
aTGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCGTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATc > 1:260109/1‑139 (MQ=255)
tGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGc > 4:127807/1‑139 (MQ=255)
aaaCACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCgg > 5:338273/1‑139 (MQ=255)
aaaCACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCg > 6:99482/1‑138 (MQ=255)
aaaCACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCg > 2:33331/1‑138 (MQ=255)
aaaCACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATAGTCAGCTCACAAGATCCACATTCCACCACCgg > 4:13003/1‑139 (MQ=255)
gAAGTGAAAACATTTCATTTTGCGGCAATCAATCAAACATGATGCATAAAAAAAGACCCTTAGTTGT‑‑CTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCa < 4:73154/139‑1 (MQ=255)
gAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCa < 3:127807/139‑1 (MQ=255)
gAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCa < 2:74980/139‑1 (MQ=255)
gAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATACACTTGCCCCCAGCGGATCCg > 6:256940/1‑137 (MQ=255)
aaaaCATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCa < 5:297037/133‑1 (MQ=255)
aaaaCATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCa > 6:297037/1‑133 (MQ=255)
aaaCATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCATCCATACTTTTAACTTCAGATCAGAAGATCCACTTGCCACAAGCGGATCCGCATGGCCg > 1:215630/1‑138 (MQ=255)
aTTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTc > 4:20584/1‑139 (MQ=255)
ttCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCg > 4:287478/1‑139 (MQ=255)
tCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCg < 3:20584/138‑1 (MQ=255)
tCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCGTCCATTCTTTTATCGTCAGCTCAGACGCTCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCg < 5:195138/138‑1 (MQ=255)
cATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGGTTCCATTCTTTTATCGTCAGCTCAGAACAACCCCTTGCCACCAGCGGATACGCATGGCCGATTTCCGCt > 1:325713/1‑139 (MQ=255)
atatTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCt < 1:326779/138‑1 (MQ=255)
tatTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGc < 6:231230/139‑1 (MQ=255)
gCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTc > 5:154733/1‑138 (MQ=255)
cGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGt > 7:263813/1‑139 (MQ=255)
cGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGt < 2:205185/139‑1 (MQ=255)
gCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTg < 8:217540/139‑1 (MQ=255)
gatgCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGa > 6:293687/1‑139 (MQ=255)
gatgCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGa > 7:73432/1‑139 (MQ=255)
atgCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGag < 3:231952/139‑2 (MQ=255)
tgCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGATTCTGGTTCGATg > 2:157663/1‑139 (MQ=255)
tgCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCg > 4:148711/1‑136 (MQ=255)
tgCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCg < 3:148711/136‑1 (MQ=255)
tgCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGAt > 3:317893/1‑138 (MQ=255)
tgCATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGAt > 5:145403/1‑138 (MQ=255)
cATAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGATGa > 8:319780/1‑138 (MQ=255)
aTAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGATGACa < 3:287478/139‑1 (MQ=255)
aTAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGATGACa < 3:251611/139‑1 (MQ=255)
aTAAAAAAAGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGATGACa < 4:317893/139‑1 (MQ=255)
aaaGACCCTTAG‑‑GGGTCTTTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGATGACATACGCt < 6:154733/139‑1 (MQ=255)
||
CGTTGCGGTCGGGTTCAGCTTTACTCAGGTGATGGTTCATGCAGGTGAAACAGCAAACACAGAAGGGAAAACATTTCATATTGCGGCACGCAATCAAACATGATGCATAAAAAAAGACCCTTAG‑‑GG‑‑C‑TTTTTATTTCTTCAGCTTCCATTCTTTTATCGTCAGCTCAGAAGATCCACTTGCCACCAGCGGATCCGCATGGCCGATTTCCGCTGCCTCTTCCAGTGAATCTGCTTCGATGACATACGCT > BS168_reference_genome/1317027‑1317274
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
