Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A13 F1 I2 R1
|
92 |
50.6 |
2362856 |
94.3% |
2228173 |
111.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,988,106 |
(C)6→7 |
intergenic (‑147/‑116) |
azuC ← / → yecR |
acid‑inducible small membrane‑associated protein/lipoprotein, function unknown |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,988,100 | 1 | . | C | 97.1%
| 253.6
/ ‑0.5
| 70 | intergenic (‑141/‑122) | azuC/yecR | acid‑inducible small membrane‑associated protein/lipoprotein, function unknown |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base C (35/33); total (37/33) |
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 |
ATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCATGA > NC_000913/1987982‑1988225
|
ataCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAGAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACAcc > 1:847457/1‑139 (MQ=255)
gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa > 1:703866/1‑139 (MQ=255)
gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa > 2:967149/1‑139 (MQ=255)
gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa > 1:821942/1‑139 (MQ=255)
gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa < 2:821942/139‑1 (MQ=255)
gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑cc > 2:1114143/1‑115 (MQ=255)
gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑cc < 1:1114143/115‑1 (MQ=255)
tttGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAAt > 1:444774/1‑139 (MQ=255)
tGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGATATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAg > 2:787588/1‑139 (MQ=255)
tataATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑cccc‑cccta < 1:1149627/103‑4 (MQ=255)
tataATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑cccc‑cccta > 2:1149627/1‑100 (MQ=255)
gACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt < 2:834409/139‑1 (MQ=255)
aCAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTc > 1:429251/1‑139 (MQ=255)
aCAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTc > 1:211899/1‑139 (MQ=255)
ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGa > 1:225242/1‑97 (MQ=255)
ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGa < 2:225242/97‑1 (MQ=255)
ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt > 1:975724/1‑134 (MQ=255)
ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt < 2:975724/134‑1 (MQ=255)
ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCtttt < 2:703866/139‑1 (MQ=255)
ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCtttt > 2:693066/1‑139 (MQ=255)
aTCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAg < 2:361332/128‑1 (MQ=255)
aTCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCACCTCTTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAg > 1:361332/1‑128 (MQ=255)
tCACAAGAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCg < 2:847457/139‑1 (MQ=255)
tCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa < 1:1038044/104‑1 (MQ=255)
tCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa > 2:1038044/1‑104 (MQ=255)
cacaAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑ccc < 2:276082/80‑1 (MQ=255)
cacaAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑ccc > 1:276082/1‑80 (MQ=255)
acaAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGc > 2:193212/1‑139 (MQ=255)
aaaaTCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt < 1:193212/139‑1 (MQ=255)
aaaaTCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt < 1:967149/139‑1 (MQ=255)
atcTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt > 1:241549/1‑132 (MQ=255)
atcTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt < 2:241549/132‑1 (MQ=255)
aTGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGt > 2:107550/1‑139 (MQ=255)
gtgATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa < 2:429251/139‑1 (MQ=255)
gATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAAc < 2:444774/139‑1 (MQ=255)
aTACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCa > 2:468543/1‑103 (MQ=255)
aTACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCa < 1:468543/103‑1 (MQ=255)
aTCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTaaa > 1:350490/1‑139 (MQ=255)
aTAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg > 2:747779/1‑115 (MQ=255)
aTAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg < 1:747779/115‑1 (MQ=255)
aTAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGt > 2:818487/1‑139 (MQ=255)
aCCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt > 2:998653/1‑104 (MQ=255)
aCCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt < 1:998653/104‑1 (MQ=255)
ttttAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGAGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCtt > 2:723222/2‑139 (MQ=255)
cTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt > 1:638122/1‑132 (MQ=255)
cTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt < 2:638122/132‑1 (MQ=255)
cTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCtt > 2:820490/1‑139 (MQ=255)
tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCt > 1:1035425/1‑45 (MQ=255)
tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCt < 2:1035425/45‑1 (MQ=255)
tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa > 2:555563/1‑112 (MQ=255)
tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa < 1:555563/112‑1 (MQ=255)
tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTAct > 1:935782/1‑139 (MQ=255)
tGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAACTAGTGCTTTCTCTTACtctt < 1:693066/139‑1 (MQ=255)
tGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACtctt < 2:211899/139‑1 (MQ=255)
tGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACtctt < 1:818487/139‑1 (MQ=255)
ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt > 2:729/1‑122 (MQ=255)
ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt < 1:729/122‑1 (MQ=255)
ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACtctt > 2:901361/1‑135 (MQ=255)
ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACtctt < 1:901361/135‑1 (MQ=255)
ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctgg > 2:511372/1‑139 (MQ=255)
ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCG‑CTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa < 2:31761/104‑1 (MQ=255)
ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCG‑CTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa > 1:31761/1‑104 (MQ=255)
taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTa > 1:137901/1‑129 (MQ=255)
taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTa < 2:137901/129‑1 (MQ=255)
taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctggc > 2:243208/1‑139 (MQ=255)
taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctggc < 1:820490/139‑1 (MQ=255)
taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctggc > 1:901352/1‑139 (MQ=255)
aaaaTGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCTAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTGTTACTCTTctggctg < 1:787588/139‑1 (MQ=255)
aaaaTGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctggctg < 1:511372/139‑1 (MQ=255)
gATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg > 2:148157/1‑87 (MQ=255)
gATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg < 1:148157/87‑1 (MQ=255)
gATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCa < 2:350490/139‑1 (MQ=255)
aTAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt > 2:180104/1‑113 (MQ=255)
aTAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt < 1:180104/113‑1 (MQ=255)
aTAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCAt > 1:897454/1‑139 (MQ=255)
aaTCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCATga < 1:243208/139‑1 (MQ=255)
|
ATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCATGA > NC_000913/1987982‑1988225
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
