Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A13 F1 I2 R1
|
92 |
50.6 |
2362856 |
94.3% |
2228173 |
111.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,946,757 |
T→C |
Y141C (TAC→TGC) |
mltA ← |
membrane‑bound lytic murein transglycosylase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,946,757 | 0 | T | C | 97.5%
| 296.2
/ ‑2.4
| 81 | Y141C (TAC→TGC) | mltA | membrane‑bound lytic murein transglycosylase A |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (44/35); total (45/36) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.98e-01 |
CACTACCCTGCACATCCATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGTAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCATCAATGCCGAACTGGCGCATA > NC_000913/2946626‑2946891
|
cACTACCCTGCACATCCATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAgg > 2:467459/1‑139 (MQ=255)
aCCCTGCACATCCATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATAc < 1:872803/139‑1 (MQ=255)
tGCACATCCATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGa > 2:594595/1‑139 (MQ=255)
tGCACATCCATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGa > 2:295808/1‑139 (MQ=255)
tGCACATCCATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGa > 1:798538/1‑139 (MQ=255)
gCACATCCATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGaa > 2:924555/1‑139 (MQ=255)
aTCCATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCg > 2:550018/1‑139 (MQ=255)
ccATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGcc < 2:741487/139‑1 (MQ=255)
ccATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGcc > 1:486088/1‑139 (MQ=255)
ccATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGcc > 1:425672/1‑139 (MQ=255)
aTGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGc > 2:437011/1‑139 (MQ=255)
aTGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGc < 2:425672/139‑1 (MQ=255)
gTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTa > 2:1171182/1‑139 (MQ=255)
aTCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGgcgcg < 1:924555/139‑1 (MQ=255)
aGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCt > 2:1000636/1‑139 (MQ=255)
tACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGTAAATAGGATACTGGAACTCGcc < 1:685757/112‑1 (MQ=255)
tACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGTAAATAGGATACTGGAACTCGcc > 2:685757/1‑112 (MQ=255)
tACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTAc < 2:798538/139‑1 (MQ=255)
gTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGc < 1:550018/139‑1 (MQ=255)
aGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTAc < 2:1034500/132‑1 (MQ=255)
aGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTAc > 1:1034500/1‑132 (MQ=255)
aGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCgtg > 1:758204/1‑139 (MQ=255)
cGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGta > 2:1035971/1‑139 (MQ=255)
agaATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGtaat < 1:1035971/139‑1 (MQ=255)
agaATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGtaat < 2:588873/139‑1 (MQ=255)
tCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTa < 1:1106145/115‑1 (MQ=255)
tCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTa > 2:1106145/1‑115 (MQ=255)
cACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTg > 1:276156/1‑139 (MQ=255)
aCTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCACATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGc > 1:81295/1‑118 (MQ=255)
aCTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGc < 2:81295/118‑1 (MQ=255)
cTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCa < 1:467459/139‑1 (MQ=255)
cTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAAGAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCa < 1:437011/139‑1 (MQ=255)
tCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGCCCACGTTTTGGCGGCATACGGCAAATCGGATACTGGAACTCGCACTGGCGGGTATGGCGCGCCTGAATTATCGGTGTGTAATAACCGGTAAACTGCAc > 1:1080946/1‑139 (MQ=255)
tCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCAc > 1:699118/1‑139 (MQ=255)
tCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCAc > 1:63090/1‑139 (MQ=255)
aaTGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGt > 1:120538/1‑139 (MQ=255)
aTGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGtt > 2:1177200/1‑139 (MQ=255)
aTGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGtt > 2:637892/1‑139 (MQ=255)
tGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGgcgcg < 1:437146/98‑1 (MQ=255)
tGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGgcgcg > 2:437146/1‑98 (MQ=255)
tGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTa > 1:173907/1‑139 (MQ=255)
tGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTa < 2:63090/139‑1 (MQ=255)
ccGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATa < 2:486088/139‑1 (MQ=255)
ccGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATa < 1:500850/139‑1 (MQ=255)
cgcgTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAgg < 2:428998/60‑1 (MQ=255)
cgcgTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAgg > 1:428998/1‑60 (MQ=255)
cgcgTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAg > 1:1111801/1‑139 (MQ=255)
cgTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGtt > 1:969612/1‑139 (MQ=255)
gTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTg < 1:1171182/139‑1 (MQ=255)
tAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGt > 1:517626/1‑139 (MQ=255)
aTCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCgg < 2:120538/139‑1 (MQ=255)
ccGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCAcc > 1:339361/1‑139 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATgg < 1:1096309/76‑1 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATgg > 2:1096309/1‑76 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTa > 1:766278/1‑89 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTa < 2:766278/89‑1 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCgg < 2:55637/93‑1 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCgg > 1:55637/1‑93 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGtaata > 2:632612/1‑102 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGtaata < 1:632612/102‑1 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCa > 2:721423/1‑116 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCa < 1:721423/116‑1 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCt > 1:180876/1‑139 (MQ=255)
cGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCt > 1:902001/1‑139 (MQ=255)
cACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGtaat < 1:1060785/99‑1 (MQ=255)
cACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGtaat > 2:1060785/1‑99 (MQ=255)
gaCGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCgg > 2:268329/1‑127 (MQ=255)
gaCGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCgg < 1:268329/127‑1 (MQ=255)
aCGGCAGACGACCACGTTTTGGCGGCATACGTCAAATAGGAGACTGGAACGCGCGCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCAGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTg < 2:1080946/139‑1 (MQ=255)
aCGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACt > 2:336663/1‑45 (MQ=255)
aCGGCAGACGACCACGTTTTGGCGGCATACGGCAAATAGGATACt < 1:336663/45‑1 (MQ=255)
acgacCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCa > 1:1017956/1‑139 (MQ=255)
cgacCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCAt < 2:517626/139‑1 (MQ=255)
acCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCt > 2:950366/1‑121 (MQ=255)
acCACGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCt < 1:950366/121‑1 (MQ=255)
aCGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCATCAATg < 2:249367/139‑1 (MQ=255)
cGTTTTGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCATCAATGc > 1:428055/1‑139 (MQ=255)
tttGGCGGCATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCATCAATGCCGa < 2:969612/139‑1 (MQ=255)
cATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCATCAATGCCGaa < 2:285629/132‑1 (MQ=255)
cATACGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCATCAATGCCGaa > 1:285629/1‑132 (MQ=255)
aCGGCAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCATCAATGCCGAACTGGCGCata < 2:428055/139‑1 (MQ=255)
|
CACTACCCTGCACATCCATAATGAAGTTATCCATCAGGGAGTTACTGTAAGCGAGAATATATTTATCACTCAATGCCCCCGCGTAGATCTCCGCACGAGACGGCAGACGACCACGTTTTGGCGGCATACGGTAAATAGGATACTGGAACTCGCCCTGGCGGGTATGGCGCGCCTGAATTACCGGCGTGTAATAACCGGTAAACTGCACGTTACCATAGTTGTCGGCACCTTCCATCTGCCAGGCATCAATGCCGAACTGGCGCATA > NC_000913/2946626‑2946891
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
