Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F1 I1 R1
|
63 |
64.8 |
2934156 |
93.7% |
2749304 |
111.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,400,278 |
A→G |
intergenic (+76/‑10) |
miaA → / → hfq |
delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase/global sRNA chaperone, HF‑I, host factor for RNA phage Q beta replication |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,400,278 | 0 | A | G | 100.0%
| 284.3
/ NA
| 75 | intergenic (+76/‑10) | miaA/hfq | delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase/global sRNA chaperone, HF‑I, host factor for RNA phage Q beta replication |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (38/37); total (38/37) |
TGAAAAACCAGAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTT > NC_000913/4400142‑4400412
|
tGAAAAACCAGAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGgaa > 1:916122/1‑139 (MQ=255)
gAAAAACCAGAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGgaaa < 1:711952/139‑1 (MQ=255)
gAAAAACCAGAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGgaaa < 1:351742/139‑1 (MQ=255)
gAAAAACCAGAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCGGAAGGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGgaaa > 2:141417/1‑139 (MQ=255)
gAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATg > 1:411646/1‑139 (MQ=255)
gcgTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTCTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGTGAATGGCTAAggg > 2:929972/1‑139 (MQ=255)
tGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCa < 1:1155225/139‑1 (MQ=255)
tGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCa > 1:7122/1‑139 (MQ=255)
tGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCa > 2:515640/1‑139 (MQ=255)
aTTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACa < 2:1101026/139‑1 (MQ=255)
aGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATc < 2:489564/139‑1 (MQ=255)
ttgttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGt > 2:962604/1‑139 (MQ=255)
tgttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATc > 1:497592/1‑124 (MQ=255)
tgttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATc < 2:497592/124‑1 (MQ=255)
tgttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGtt > 2:682160/1‑139 (MQ=255)
tgttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGtt > 1:663350/1‑139 (MQ=255)
gttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTc < 1:669991/139‑1 (MQ=255)
ttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAAt > 1:1400977/1‑107 (MQ=255)
ttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAAt < 2:1400977/107‑1 (MQ=255)
ttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTcc > 1:760199/1‑139 (MQ=255)
ttgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTcc > 2:1018809/1‑139 (MQ=255)
ttgGTGCTATCGCAGACTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTcc > 2:574060/1‑139 (MQ=255)
ttgGTGCTATCGCAGACTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTcc > 2:451532/1‑139 (MQ=255)
tgGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCt < 1:962604/139‑1 (MQ=255)
tGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATc > 2:206465/1‑118 (MQ=255)
tGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATc < 1:206465/118‑1 (MQ=255)
cTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGaaag > 2:246461/1‑137 (MQ=255)
tATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGc < 1:682160/139‑1 (MQ=255)
gCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTg < 2:1098322/139‑1 (MQ=255)
aGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCg < 1:246461/139‑1 (MQ=255)
aGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCg < 2:663350/139‑1 (MQ=255)
cTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCg > 2:905950/1‑139 (MQ=255)
aaTGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGa > 2:394162/1‑139 (MQ=255)
tACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCt < 1:1351778/86‑1 (MQ=255)
tACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCt > 2:1351778/1‑86 (MQ=255)
tACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGc > 2:130223/1‑93 (MQ=255)
tACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGc < 1:130223/93‑1 (MQ=255)
tACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACgtgt > 1:1352407/1‑139 (MQ=255)
cAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTc < 2:1298548/139‑1 (MQ=255)
aTTGAGACGTATCGTGCGCAATTTTTTCCGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCa > 1:910265/1‑139 (MQ=255)
aTTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCtt < 2:46168/95‑1 (MQ=255)
aTTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCtt > 1:46168/1‑95 (MQ=255)
tGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGt < 1:515640/139‑1 (MQ=255)
agaCGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGttt > 1:327075/1‑139 (MQ=255)
agaCGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAA‑‑AGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCa < 2:222744/112‑1 (MQ=255)
agaCGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAA‑‑AGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCa > 1:222744/1‑112 (MQ=255)
tATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCtatt > 1:1142388/1‑139 (MQ=255)
tATCGTGCGCAATTTGTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGAACTGCGTCGGGAACGTGTTCCAGTTTCtatt > 2:982468/1‑139 (MQ=255)
tCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCt > 2:731902/1‑71 (MQ=255)
tCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCt > 2:483976/1‑71 (MQ=255)
tCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCt < 1:483976/71‑1 (MQ=255)
tCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCt < 1:731902/71‑1 (MQ=255)
tCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCtattta > 2:1232649/1‑139 (MQ=255)
cGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCtatttat < 1:394162/139‑1 (MQ=255)
cGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCtatttat < 2:1142388/139‑1 (MQ=255)
tGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGt > 2:154956/1‑127 (MQ=255)
tGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGt < 1:154956/127‑1 (MQ=255)
cgcAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTgg > 1:108042/1‑139 (MQ=255)
aaTTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGa > 1:1079905/1‑139 (MQ=255)
aTTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGaa < 2:1079905/139‑1 (MQ=255)
cAAAGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCaa > 1:741332/1‑139 (MQ=255)
aGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGaa < 1:1070063/114‑1 (MQ=255)
aGTACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGaa > 2:1070063/1‑114 (MQ=255)
tACAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCgt < 2:916122/139‑2 (MQ=255)
cAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGaa > 1:579061/1‑110 (MQ=255)
cAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGaa < 2:579061/110‑1 (MQ=255)
cAAATAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGt > 1:440246/1‑139 (MQ=255)
aaaTAAGCATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTc > 1:458165/1‑139 (MQ=255)
cATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGAt < 2:741332/139‑1 (MQ=255)
cATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGAt < 2:1165418/139‑1 (MQ=255)
cATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGAt < 2:7122/139‑1 (MQ=255)
cATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGAt < 1:1350375/139‑1 (MQ=255)
cATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGAt < 2:440246/139‑1 (MQ=255)
cATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGAt < 1:905950/139‑1 (MQ=255)
cATATAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGAt < 2:103079/139‑1 (MQ=255)
atatAAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATc < 1:1018809/139‑1 (MQ=255)
tataAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCa < 1:451532/139‑1 (MQ=255)
tataAGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCa < 1:574060/139‑1 (MQ=255)
aaGGGAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGtt > 2:725312/1‑139 (MQ=255)
|
TGAAAAACCAGAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTT > NC_000913/4400142‑4400412
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
