Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F1 I2 R1
|
94 |
59.5 |
3027142 |
91.9% |
2781943 |
108.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,198,006 |
T→G |
pseudogene (1533/2847 nt) |
yehH → |
DUF4132 family pseudogene, defective yehI paralog, molybdate metabolism regulator, first fragment, molybdate metabolism regulator, second fragment 2, yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,198,006 | 0 | T | G | 100.0%
| 247.0
/ NA
| 67 | pseudogene (1533/2847 nt) | yehH | DUF4132 family pseudogene, defective yehI paralog, molybdate metabolism regulator, first fragment, molybdate metabolism regulator, second fragment 2, yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (36/31); total (36/31) |
AACCAGCACTGGCAGAACAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCTCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTGGTATTCAAAAC > NC_000913/2197870‑2198139
|
aaCCAGCACTGGCAGAACAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTctccccgcc > 1:223851/1‑139 (MQ=255)
aCCAGCACTGGCAGAACAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTctccccgccc < 1:1047894/139‑1 (MQ=255)
gCACTGGCAGAACAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGc > 2:1179471/1‑139 (MQ=255)
ggCAGAACAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCg > 2:423856/1‑139 (MQ=255)
cAGAACAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCgaa > 2:793579/1‑139 (MQ=255)
aCAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCgaaaaag > 2:811126/1‑139 (MQ=255)
ggTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCgaaaaagaaa > 1:836252/1‑139 (MQ=255)
gTCATTCCCTGGCTCTCGACACCCACAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCgaaaaagaaaa > 1:767438/1‑139 (MQ=255)
tCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCgaaaaagaaaaa > 1:1347275/1‑139 (MQ=255)
tCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCgaaaaagaaaaa > 2:271632/1‑139 (MQ=255)
tCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCg > 2:1453071/1‑139 (MQ=255)
ggCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGAt > 2:1211340/1‑139 (MQ=255)
agCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGGAACAACTGACACAGCCCTCAAACCATGCCAGTGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAGAAGAAAAAATCGCCGAt > 1:926624/2‑139 (MQ=255)
ctcGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAATAAAAAATCGCCGATTCCg < 2:836252/139‑1 (MQ=255)
ctcGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCg < 2:84255/139‑1 (MQ=255)
ctcGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCg < 1:1211340/139‑1 (MQ=255)
cGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGt < 1:586830/139‑1 (MQ=255)
cacCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAGCCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCt < 2:1347275/139‑1 (MQ=255)
ccGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGa > 2:1055905/1‑139 (MQ=255)
gCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGAtt > 1:202001/1‑139 (MQ=255)
cAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTctccccgcc > 1:509128/1‑94 (MQ=255)
gTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg < 1:271632/139‑1 (MQ=255)
gTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg < 1:423856/139‑1 (MQ=255)
gTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg < 1:1453071/139‑1 (MQ=255)
tGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAgcg < 2:223851/139‑1 (MQ=255)
tGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAgcg < 2:495053/139‑1 (MQ=255)
gCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAgcgc > 1:1440810/1‑139 (MQ=255)
gCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAgcgc > 2:1016735/1‑139 (MQ=255)
aCTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTa < 2:202001/139‑1 (MQ=255)
gAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGc > 2:1470830/1‑139 (MQ=255)
aaaTCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCa > 1:1249704/1‑139 (MQ=255)
aTGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTa < 2:1274632/130‑1 (MQ=255)
aTGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTa > 1:1274632/1‑130 (MQ=255)
aTGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAg < 1:1016735/139‑1 (MQ=255)
gCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGcc < 2:995615/139‑1 (MQ=255)
gCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGcc < 2:306500/139‑1 (MQ=255)
aGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg > 2:1384976/1‑117 (MQ=255)
aGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg < 1:1384976/117‑1 (MQ=255)
gCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATc < 2:594221/139‑1 (MQ=255)
caacaaCTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGCTTTAGCGCCATTAGGCATTGAGCCAATCt > 1:1019804/1‑139 (MQ=255)
acaGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACa > 1:336858/1‑139 (MQ=255)
aGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACaga > 1:1324146/1‑139 (MQ=255)
gCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACagaa > 2:1219876/1‑139 (MQ=255)
cccTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGcc > 2:282257/1‑119 (MQ=255)
cccTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGcc < 1:282257/119‑1 (MQ=255)
aTGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTaa > 2:940643/1‑139 (MQ=255)
tGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAAt > 2:57780/1‑139 (MQ=255)
cgcCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCgaa > 2:965375/1‑48 (MQ=255)
cgcCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCgaa < 1:965375/48‑1 (MQ=255)
cgcCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg < 2:142732/83‑1 (MQ=255)
cgcCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg > 1:142732/1‑83 (MQ=255)
cgcCGATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACtt > 1:1173429/1‑139 (MQ=255)
gATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTgg < 1:1055905/139‑1 (MQ=255)
gATCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTgg < 2:1019804/139‑1 (MQ=255)
tCTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCg < 2:926624/139‑1 (MQ=255)
cTACTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGa < 2:1440810/139‑1 (MQ=255)
cTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAat < 1:940643/139‑1 (MQ=255)
cTGCCAGCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAat > 1:29045/1‑139 (MQ=255)
gCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGaa < 1:693069/131‑1 (MQ=255)
gCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGaa > 2:693069/1‑131 (MQ=255)
gCCGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCt > 2:435885/1‑139 (MQ=255)
ccGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg < 2:1310645/66‑1 (MQ=255)
ccGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg > 1:1310645/1‑66 (MQ=255)
ccGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTg > 2:349747/1‑139 (MQ=255)
cGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCt < 1:800755/57‑1 (MQ=255)
cGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCt > 2:800755/1‑57 (MQ=255)
cGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACagaa < 1:717063/103‑1 (MQ=255)
cGTAGTAGTCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACagaa > 2:717063/1‑103 (MQ=255)
gtagtCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTGGTAtt < 1:793579/139‑1 (MQ=255)
agtCTCCCCGCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTGGTATTCa < 1:57780/139‑1 (MQ=255)
ctccccgcccTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTGGTATTCaaaa < 1:811126/139‑1 (MQ=255)
ctccccgcccTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTGGTATTCaaaa < 2:1173429/139‑1 (MQ=255)
tccccgcccTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCNGTAATCAACTTTTGGCGAAATATATCTGGTATTCAAAac > 1:804448/1‑139 (MQ=255)
tccccgcccTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTGGTATTCAAAac > 2:652283/1‑139 (MQ=255)
cccgccctGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAgcg < 1:150063/55‑1 (MQ=255)
cccgccctGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg < 2:1456580/53‑1 (MQ=255)
cccgccctGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAg > 1:1456580/1‑53 (MQ=255)
cccgccctGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCa > 1:1022671/1‑73 (MQ=255)
cccgccctGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCa < 2:1022671/73‑1 (MQ=255)
|
AACCAGCACTGGCAGAACAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCTCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTGGTATTCAAAAC > NC_000913/2197870‑2198139
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
