Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F1 I2 R1
|
59 |
52.6 |
2411032 |
94.1% |
2268781 |
113.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,071,308 |
G→T |
intergenic (+97/‑9) |
yeeP → / → isrC |
pseudogene, CP4‑44 prophage, 50S ribosome‑binding GTPase family,Phage or Prophage Related, putative histone/novel sRNA, CP4‑44, putative prophage remnant |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,071,308 | 0 | G | T | 100.0%
| 612.5
/ NA
| 171 | intergenic (+97/‑9) | yeeP/isrC | pseudogene, CP4‑44 prophage, 50S ribosome‑binding GTPase family,Phage or Prophage Related, putative histone/novel sRNA, CP4‑44, putative prophage remnant |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (73/98); total (73/98) |
Only 100 of 175 total aligned reads displayed.
TCTGTTGCCCGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACCACAATTCAGAAACTC > NC_000913/2071173‑2071441
|
ttGCCCGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATaaaa < 1:991354/139‑1 (MQ=255)
tGCCCGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAAc > 1:677954/1‑139 (MQ=255)
ccGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGAt > 1:1062608/1‑139 (MQ=255)
ccGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTAACAATAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGAt < 2:1034956/139‑1 (MQ=255)
ccGTGCGGTATGGAACTGGATCTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGAt < 1:435412/139‑1 (MQ=255)
cGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATc > 2:943631/1‑139 (MQ=255)
gTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATaaaa > 1:66905/1‑133 (MQ=255)
gCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAat > 1:158921/1‑139 (MQ=255)
gCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAat < 2:1162534/139‑1 (MQ=255)
gCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAat < 1:550083/139‑1 (MQ=255)
ggATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 1:576775/139‑1 (MQ=255)
ggATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 1:839401/139‑1 (MQ=255)
ggATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 2:842280/139‑1 (MQ=255)
ggATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 2:107093/139‑1 (MQ=255)
ggATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 2:287942/139‑1 (MQ=255)
ggATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 2:327804/139‑1 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCCCTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcga < 2:866227/139‑1 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGAt > 2:1203645/1‑121 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGAt > 1:136644/1‑121 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcga > 2:418432/1‑139 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcga > 1:660095/1‑139 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcga < 2:427013/139‑1 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcga < 2:450007/139‑1 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcga < 1:557058/139‑1 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcga > 1:427013/1‑139 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcga > 1:450007/1‑139 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 1:48148/138‑1 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 1:535156/138‑1 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg > 2:535156/1‑138 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg > 2:48148/1‑138 (MQ=255)
gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 1:20225/138‑1 (MQ=255)
aTTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcgat < 1:912768/139‑1 (MQ=255)
tttCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcgatcg < 2:25926/139‑1 (MQ=255)
tGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTatat < 2:923230/139‑1 (MQ=255)
tGAACCTGTCGTGACAGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTatat < 1:1160236/139‑1 (MQ=255)
aaCCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATaaa > 1:544473/1‑104 (MQ=255)
aaCCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATaaa < 2:544473/104‑1 (MQ=255)
tGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAat < 2:665210/109‑1 (MQ=255)
gTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATAtcgatcga < 1:319418/139‑1 (MQ=255)
gTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATAtcgatcga > 1:820248/1‑139 (MQ=255)
tCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATcgatcgat < 1:955969/139‑1 (MQ=255)
tCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATcgatcgat < 1:931183/139‑1 (MQ=255)
gACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc < 1:28380/139‑1 (MQ=255)
gACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGGCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc < 2:852486/139‑1 (MQ=255)
gATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaat < 2:315593/139‑1 (MQ=255)
aTGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGa < 2:895686/93‑1 (MQ=255)
aTGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGAt > 2:673866/1‑94 (MQ=255)
aTGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 1:855144/111‑1 (MQ=255)
tGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaataa > 2:69987/1‑139 (MQ=255)
tGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaataa > 2:700594/1‑139 (MQ=255)
tGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaataa > 2:156887/1‑139 (MQ=255)
ccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg > 2:578628/1‑104 (MQ=255)
cctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCtt < 1:621778/139‑1 (MQ=255)
aCTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTat > 2:381940/1‑97 (MQ=255)
ctctGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCa < 1:1188860/139‑1 (MQ=255)
tGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 2:46682/95‑1 (MQ=255)
tGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg > 1:46682/1‑95 (MQ=255)
tGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc < 2:1157907/118‑1 (MQ=255)
tGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc > 1:1157907/1‑118 (MQ=255)
aGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 1:252370/93‑1 (MQ=255)
aGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg > 2:1153914/1‑93 (MQ=255)
aGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 1:1153914/93‑1 (MQ=255)
aGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATAtcgatcga < 1:274628/111‑1 (MQ=255)
aGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATAtcgatcga > 2:274628/1‑111 (MQ=255)
cTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATg < 1:418432/139‑1 (MQ=255)
cTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATg < 1:122016/139‑1 (MQ=255)
tGCTCACAAAAGCACTGTTTTCGATACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTatcg < 2:826034/89‑1 (MQ=255)
gCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca < 1:391935/139‑1 (MQ=255)
gCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca < 1:190893/139‑1 (MQ=255)
tCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGcaca < 1:824458/139‑1 (MQ=255)
caAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGAt > 1:327062/1‑139 (MQ=255)
aaaaGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATa < 2:1134538/139‑1 (MQ=255)
gCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTa < 2:43040/139‑1 (MQ=255)
cACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAAc < 1:917556/123‑1 (MQ=255)
cACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAAc > 2:917556/1‑123 (MQ=255)
cACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTAc > 1:965019/1‑139 (MQ=255)
aCTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACa < 2:1176260/139‑1 (MQ=255)
tttCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAg < 1:69987/139‑1 (MQ=255)
gTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAGAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAGCCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACAt > 1:809270/1‑139 (MQ=255)
ttACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACAtt < 2:322563/139‑1 (MQ=255)
tGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAAcc < 2:169401/96‑1 (MQ=255)
tGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAgg > 1:1004173/1‑139 (MQ=255)
tGTCTCTCTTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAgg > 2:397587/1‑139 (MQ=255)
tctctTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc < 2:170056/81‑1 (MQ=255)
tctctTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTATATATCGATCGATAAGc > 1:170056/1‑81 (MQ=255)
tctTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGaacaa < 1:397587/139‑1 (MQ=255)
ctTGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGaacaac > 1:342848/1‑139 (MQ=255)
tGTCCGTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc > 2:209613/1‑76 (MQ=255)
gTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCt < 1:643981/72‑1 (MQ=255)
gTGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCt > 2:643981/1‑72 (MQ=255)
tGCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACcac > 2:784513/1‑139 (MQ=255)
gCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAAc < 2:518549/92‑1 (MQ=255)
gCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAAc > 1:518549/1‑92 (MQ=255)
gCAATAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAAc < 2:961449/135‑1 (MQ=255)
tAGCTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACCACAATTc > 1:281936/1‑139 (MQ=255)
cTCAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTTTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACCACAATTCAGa < 1:718091/139‑1 (MQ=255)
cAATAATATAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACCACAATTCAGaaa > 1:163743/1‑139 (MQ=255)
taatataataAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca > 2:1099692/1‑85 (MQ=255)
taatataataAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca < 1:1099692/85‑1 (MQ=255)
taatataataAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACCACAATTCAGAAACTc > 1:225605/1‑139 (MQ=255)
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TCTGTTGCCCGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACCACAATTCAGAAACTC > NC_000913/2071173‑2071441
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
